RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.83■□□□□ 0.93
SCAF1-201ENST00000360565 APAF1O14727 1248 aa20.83■□□□□ 0.92
SCAF1-201ENST00000360565 ITPRIPQ8IWB1 547 aa20.83■□□□□ 0.92
SCAF1-201ENST00000360565 SLKQ9H2G2 1235 aaPredicted RBP20.82■□□□□ 0.92
SCAF1-201ENST00000360565 CC2D2AQ9P2K1 1620 aa20.81■□□□□ 0.92
SCAF1-201ENST00000360565 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
SCAF1-201ENST00000360565 MIA2Q96PC5 1412 aa20.81■□□□□ 0.92
SCAF1-201ENST00000360565 SMC4Q9NTJ3 1288 aa20.81■□□□□ 0.92
SCAF1-201ENST00000360565 EHBP1L1Q8N3D4 1523 aa20.8■□□□□ 0.92
SCAF1-201ENST00000360565 LMOD2Q6P5Q4 547 aa20.8■□□□□ 0.92
SCAF1-201ENST00000360565 HSCBQ8IWL3 235 aa20.8■□□□□ 0.92
SCAF1-201ENST00000360565 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
SCAF1-201ENST00000360565 TERF2IPQ9NYB0 399 aa20.79■□□□□ 0.92
SCAF1-201ENST00000360565 PRG4Q92954 1404 aaPredicted RBP20.78■□□□□ 0.92
SCAF1-201ENST00000360565 HDGFP51858 240 aaKnown RBP20.78■□□□□ 0.92
SCAF1-201ENST00000360565 BCL2L13Q9BXK5 485 aa20.78■□□□□ 0.92
SCAF1-201ENST00000360565 PMFBP1Q8TBY8 1022 aa20.77■□□□□ 0.92
SCAF1-201ENST00000360565 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
SCAF1-201ENST00000360565 NBPF1Q3BBV0 1214 aa20.76■□□□□ 0.91
SCAF1-201ENST00000360565 ABCA10Q8WWZ4 1543 aa20.76■□□□□ 0.91
SCAF1-201ENST00000360565 PCF11O94913 1555 aaKnown RBP20.75■□□□□ 0.91
SCAF1-201ENST00000360565 APBB1O00213 710 aa20.74■□□□□ 0.91
SCAF1-201ENST00000360565 CENPQQ7L2Z9 268 aaPredicted RBP20.74■□□□□ 0.91
SCAF1-201ENST00000360565 TPRNQ4KMQ1 711 aa20.74■□□□□ 0.91
SCAF1-201ENST00000360565 E9PSI1 815 aa20.73■□□□□ 0.91
SCAF1-201ENST00000360565 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
SCAF1-201ENST00000360565 KIAA1107Q9UPP5 1409 aa20.72■□□□□ 0.91
SCAF1-201ENST00000360565 AFAP1Q8N556 730 aa20.72■□□□□ 0.91
SCAF1-201ENST00000360565 TROQ12816 1431 aaPredicted RBP20.71■□□□□ 0.91
SCAF1-201ENST00000360565 CDCA7LQ96GN5 454 aa20.71■□□□□ 0.91
SCAF1-201ENST00000360565 COG6Q9Y2V7 657 aa20.71■□□□□ 0.91
SCAF1-201ENST00000360565 BRD4O60885 1362 aaPredicted RBP20.71■□□□□ 0.91
SCAF1-201ENST00000360565 SLC4A3P48751 1232 aa20.71■□□□□ 0.91
SCAF1-201ENST00000360565 HAP1P54257 671 aaPredicted RBP20.71■□□□□ 0.91
SCAF1-201ENST00000360565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.7■□□□□ 0.9
SCAF1-201ENST00000360565 CALD1Q05682 793 aaKnown RBP20.7■□□□□ 0.9
SCAF1-201ENST00000360565 MAP3K1Q13233 1512 aa20.69■□□□□ 0.9
SCAF1-201ENST00000360565 CDK13Q14004 1512 aaKnown RBP20.69■□□□□ 0.9
SCAF1-201ENST00000360565 MFAP1P55081 439 aaKnown RBP20.69■□□□□ 0.9
SCAF1-201ENST00000360565 ADAMTS8Q9UP79 889 aa20.69■□□□□ 0.9
SCAF1-201ENST00000360565 DAPK1P53355 1430 aa20.69■□□□□ 0.9
SCAF1-201ENST00000360565 C11orf95C9JLR9 678 aaPredicted RBP20.69■□□□□ 0.9
SCAF1-201ENST00000360565 RTF1Q92541 710 aaKnown RBP20.69■□□□□ 0.9
SCAF1-201ENST00000360565 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
SCAF1-201ENST00000360565 PNISRQ8TF01 805 aaKnown RBP20.68■□□□□ 0.9
SCAF1-201ENST00000360565 CGNL1Q0VF96 1302 aa20.68■□□□□ 0.9
SCAF1-201ENST00000360565 EPRSP07814 1512 aaKnown RBP20.68■□□□□ 0.9
SCAF1-201ENST00000360565 A0A0G2JS52 829 aa20.68■□□□□ 0.9
SCAF1-201ENST00000360565 FAM161AQ3B820 660 aa20.68■□□□□ 0.9
SCAF1-201ENST00000360565 C9orf84Q5VXU9 1444 aa20.66■□□□□ 0.9
SCAF1-201ENST00000360565 OS9Q13438 667 aaPredicted RBP20.66■□□□□ 0.9
SCAF1-201ENST00000360565 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
SCAF1-201ENST00000360565 SUPT6HQ7KZ85 1726 aaKnown RBP20.65■□□□□ 0.9
SCAF1-201ENST00000360565 EVC2Q86UK5 1308 aa20.65■□□□□ 0.9
SCAF1-201ENST00000360565 GLIPR1L2Q4G1C9 344 aa20.64■□□□□ 0.89
SCAF1-201ENST00000360565 GZF1Q9H116 711 aaPredicted RBP20.63■□□□□ 0.89
SCAF1-201ENST00000360565 AKNAQ7Z591 1439 aa20.63■□□□□ 0.89
SCAF1-201ENST00000360565 STAC3Q96MF2 364 aa20.63■□□□□ 0.89
SCAF1-201ENST00000360565 MINK1Q8N4C8 1332 aaPredicted RBP20.63■□□□□ 0.89
SCAF1-201ENST00000360565 HECW1Q76N89 1606 aa20.63■□□□□ 0.89
SCAF1-201ENST00000360565 NUTM2FA1L443 756 aa20.62■□□□□ 0.89
SCAF1-201ENST00000360565 ELL2O00472 640 aaPredicted RBP20.62■□□□□ 0.89
SCAF1-201ENST00000360565 PTMAP06454 111 aaKnown RBP20.62■□□□□ 0.89
SCAF1-201ENST00000360565 CFAP70Q5T0N1 1121 aa20.62■□□□□ 0.89
SCAF1-201ENST00000360565 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
SCAF1-201ENST00000360565 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
SCAF1-201ENST00000360565 BIVM-ERCC5R4GMW8 1640 aa20.62■□□□□ 0.89
SCAF1-201ENST00000360565 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
SCAF1-201ENST00000360565 SNAPC4Q5SXM2 1469 aa20.6■□□□□ 0.89
SCAF1-201ENST00000360565 ANKRD30BQ9BXX2 1392 aa20.6■□□□□ 0.89
SCAF1-201ENST00000360565 L1TD1Q5T7N2 865 aaKnown RBP20.59■□□□□ 0.89
SCAF1-201ENST00000360565 ZKSCAN2Q63HK3 967 aa20.59■□□□□ 0.89
SCAF1-201ENST00000360565 ROCK1Q13464 1354 aa20.58■□□□□ 0.89
SCAF1-201ENST00000360565 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.89
SCAF1-201ENST00000360565 NGEFQ8N5V2 710 aa20.58■□□□□ 0.89
SCAF1-201ENST00000360565 ARHGAP5Q13017 1502 aa20.58■□□□□ 0.88
SCAF1-201ENST00000360565 NAP1L5Q96NT1 182 aaPredicted RBP20.57■□□□□ 0.88
SCAF1-201ENST00000360565 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
SCAF1-201ENST00000360565 PAK3O75914 559 aaPredicted RBP20.57■□□□□ 0.88
SCAF1-201ENST00000360565 PPP2R1AP30153 589 aa20.57■□□□□ 0.88
SCAF1-201ENST00000360565 KCNJ4P48050 445 aa20.57■□□□□ 0.88
SCAF1-201ENST00000360565 USP35Q9P2H5 1018 aa20.55■□□□□ 0.88
SCAF1-201ENST00000360565 CFAP44Q96MT7 982 aa20.54■□□□□ 0.88
SCAF1-201ENST00000360565 RUNDC1Q96C34 613 aa20.54■□□□□ 0.88
SCAF1-201ENST00000360565 ABCC5O15440 1437 aa20.53■□□□□ 0.88
SCAF1-201ENST00000360565 PLCB2Q00722 1185 aa20.52■□□□□ 0.88
SCAF1-201ENST00000360565 SLC4A10Q6U841 1118 aa20.52■□□□□ 0.88
SCAF1-201ENST00000360565 IQGAP2Q13576 1575 aa20.52■□□□□ 0.88
SCAF1-201ENST00000360565 PTPN23Q9H3S7 1636 aa20.52■□□□□ 0.87
SCAF1-201ENST00000360565 LMOD3Q0VAK6 560 aa20.52■□□□□ 0.87
SCAF1-201ENST00000360565 GBP4Q96PP9 640 aa20.52■□□□□ 0.87
SCAF1-201ENST00000360565 MCCP23508 829 aa20.51■□□□□ 0.87
SCAF1-201ENST00000360565 PANK1Q8TE04 598 aa20.51■□□□□ 0.87
SCAF1-201ENST00000360565 STK31Q9BXU1 1019 aa20.51■□□□□ 0.87
SCAF1-201ENST00000360565 CUL7Q14999 1698 aa20.49■□□□□ 0.87
SCAF1-201ENST00000360565 MTHFSP49914 203 aa20.49■□□□□ 0.87
SCAF1-201ENST00000360565 DNTTIP2Q5QJE6 756 aaKnown RBP20.49■□□□□ 0.87
SCAF1-201ENST00000360565 NGDNQ8NEJ9 315 aaKnown RBP20.49■□□□□ 0.87
SCAF1-201ENST00000360565 CYB5RLQ6IPT4 315 aa20.49■□□□□ 0.87
SCAF1-201ENST00000360565 GGNBP2Q9H3C7 697 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms