RNA–Protein interactions for RNA: ENST00000354361.3

SYF2-202, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2 BASIC

Gene SYF2, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-202ENST00000354361 DPYSL4O14531 572 aa9.29□□□□□ -0.92
SYF2-202ENST00000354361 IFFO2Q5TF58 517 aa9.29□□□□□ -0.92
SYF2-202ENST00000354361 ANKK1Q8NFD2 765 aa9.27□□□□□ -0.93
SYF2-202ENST00000354361 A0A0G2JS52 829 aa9.25□□□□□ -0.93
SYF2-202ENST00000354361 EPAS1Q99814 870 aa9.25□□□□□ -0.93
SYF2-202ENST00000354361 BCAMP50895 628 aa9.24□□□□□ -0.93
SYF2-202ENST00000354361 C6orf132Q5T0Z8 1188 aa9.24□□□□□ -0.93
SYF2-202ENST00000354361 KIAA1468Q9P260 1216 aa9.24□□□□□ -0.93
SYF2-202ENST00000354361 LAPTM4BQ86VI4 370 aa9.23□□□□□ -0.93
SYF2-202ENST00000354361 RBM33Q96EV2 1170 aaKnown RBP9.23□□□□□ -0.93
SYF2-202ENST00000354361 RGS20O76081 388 aa9.22□□□□□ -0.93
SYF2-202ENST00000354361 DDX12PQ92771 950 aa9.22□□□□□ -0.93
SYF2-202ENST00000354361 SEPT9Q9UHD8 586 aaPredicted RBP9.22□□□□□ -0.93
SYF2-202ENST00000354361 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
SYF2-202ENST00000354361 BBXQ8WY36 941 aaPredicted RBP9.21□□□□□ -0.94
SYF2-202ENST00000354361 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
SYF2-202ENST00000354361 TRIM6-TRIM34B2RNG4 842 aa9.2□□□□□ -0.94
SYF2-202ENST00000354361 ONECUT3O60422 494 aaPredicted RBP9.19□□□□□ -0.94
SYF2-202ENST00000354361 ITGBL1O95965 494 aaPredicted RBP9.19□□□□□ -0.94
SYF2-202ENST00000354361 NBR1Q14596 966 aa9.18□□□□□ -0.94
SYF2-202ENST00000354361 PDIA6Q15084 440 aa9.17□□□□□ -0.94
SYF2-202ENST00000354361 WBP1LQ9NX94 342 aa9.17□□□□□ -0.94
SYF2-202ENST00000354361 EN1Q05925 392 aaPredicted RBP9.16□□□□□ -0.94
SYF2-202ENST00000354361 FAM98CQ17RN3 349 aaKnown RBP9.16□□□□□ -0.94
SYF2-202ENST00000354361 NYAP1Q6ZVC0 841 aa9.16□□□□□ -0.94
SYF2-202ENST00000354361 MAP3K7O43318 606 aa9.15□□□□□ -0.94
SYF2-202ENST00000354361 TSR1Q2NL82 804 aaKnown RBP9.15□□□□□ -0.94
SYF2-202ENST00000354361 IRX2Q9BZI1 471 aaPredicted RBP9.15□□□□□ -0.94
SYF2-202ENST00000354361 SPRYD3Q8NCJ5 442 aa9.12□□□□□ -0.95
SYF2-202ENST00000354361 LRCH3Q96II8 777 aa9.12□□□□□ -0.95
SYF2-202ENST00000354361 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
SYF2-202ENST00000354361 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
SYF2-202ENST00000354361 HPS5Q9UPZ3 1129 aa9.12□□□□□ -0.95
SYF2-202ENST00000354361 SPDYE16A6NNV3 312 aaPredicted RBP9.11□□□□□ -0.95
SYF2-202ENST00000354361 TSR3Q9UJK0 312 aaKnown RBP9.11□□□□□ -0.95
SYF2-202ENST00000354361 KCNC4Q03721 635 aa9.1□□□□□ -0.95
SYF2-202ENST00000354361 PACS2Q86VP3 889 aa9.1□□□□□ -0.95
SYF2-202ENST00000354361 E2F4Q16254 413 aa9.09□□□□□ -0.95
SYF2-202ENST00000354361 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.09□□□□□ -0.95
SYF2-202ENST00000354361 PRIM1P49642 420 aaKnown RBP9.08□□□□□ -0.96
SYF2-202ENST00000354361 CDCA7LQ96GN5 454 aa9.07□□□□□ -0.96
SYF2-202ENST00000354361 GRXCR2A6NFK2 248 aa9.06□□□□□ -0.96
SYF2-202ENST00000354361 SMAPO00193 183 aa9.06□□□□□ -0.96
SYF2-202ENST00000354361 PRSS12P56730 875 aa9.05□□□□□ -0.96
SYF2-202ENST00000354361 FAM198AQ9UFP1 575 aa9.05□□□□□ -0.96
SYF2-202ENST00000354361 ARIH1Q9Y4X5 557 aaPredicted RBP9.05□□□□□ -0.96
SYF2-202ENST00000354361 CFAP44Q96MT7 982 aa9.04□□□□□ -0.96
SYF2-202ENST00000354361 PPP4CP60510 307 aa9.03□□□□□ -0.96
SYF2-202ENST00000354361 PAXIP1Q6ZW49 1069 aaPredicted RBP9.03□□□□□ -0.96
SYF2-202ENST00000354361 SAMD7Q7Z3H4 446 aa9.03□□□□□ -0.96
SYF2-202ENST00000354361 CERKQ8TCT0 537 aa9.03□□□□□ -0.96
SYF2-202ENST00000354361 WDR70Q9NW82 654 aa9.03□□□□□ -0.96
SYF2-202ENST00000354361 C3orf80F5H4A9 247 aa9.02□□□□□ -0.97
SYF2-202ENST00000354361 CDHR5Q9HBB8 845 aa9.02□□□□□ -0.97
SYF2-202ENST00000354361 NBPF26B4DH59 902 aa9.01□□□□□ -0.97
SYF2-202ENST00000354361 AMER1Q5JTC6 1135 aaPredicted RBP9.01□□□□□ -0.97
SYF2-202ENST00000354361 TATDN2Q93075 761 aa9.01□□□□□ -0.97
SYF2-202ENST00000354361 PNMA3Q9UL41 463 aa9.01□□□□□ -0.97
SYF2-202ENST00000354361 OSBPP22059 807 aa9□□□□□ -0.97
SYF2-202ENST00000354361 TJAP1Q5JTD0 557 aa8.98□□□□□ -0.97
SYF2-202ENST00000354361 RTN4Q9NQC3 1192 aaKnown RBP8.98□□□□□ -0.97
SYF2-202ENST00000354361 RNF40O75150 1001 aa8.97□□□□□ -0.97
SYF2-202ENST00000354361 Q6ZNB5 142 aa8.97□□□□□ -0.97
SYF2-202ENST00000354361 NUDT18Q6ZVK8 323 aa8.97□□□□□ -0.97
SYF2-202ENST00000354361 RBM27Q9P2N5 1060 aaKnown RBP8.97□□□□□ -0.97
SYF2-202ENST00000354361 MTRQ99707 1265 aa8.96□□□□□ -0.98
SYF2-202ENST00000354361 IL21Q9HBE4 155 aa8.94□□□□□ -0.98
SYF2-202ENST00000354361 PADI6Q6TGC4 694 aa8.93□□□□□ -0.98
SYF2-202ENST00000354361 APLP1P51693 650 aa8.92□□□□□ -0.98
SYF2-202ENST00000354361 HDGFP51858 240 aaKnown RBP8.92□□□□□ -0.98
SYF2-202ENST00000354361 TTC13Q8NBP0 860 aa8.91□□□□□ -0.98
SYF2-202ENST00000354361 NPDC1Q9NQX5 325 aaPredicted RBP8.91□□□□□ -0.98
SYF2-202ENST00000354361 ZNF516Q92618 1163 aa8.9□□□□□ -0.98
SYF2-202ENST00000354361 SWT1Q5T5J6 900 aaKnown RBP8.89□□□□□ -0.99
SYF2-202ENST00000354361 PPP1R18Q6NYC8 613 aa8.89□□□□□ -0.99
SYF2-202ENST00000354361 PRKD2Q9BZL6 878 aa8.89□□□□□ -0.99
SYF2-202ENST00000354361 LAPTM4AQ15012 233 aa8.88□□□□□ -0.99
SYF2-202ENST00000354361 GFRA3O60609 400 aa8.87□□□□□ -0.99
SYF2-202ENST00000354361 SLF2Q8IX21 1173 aa8.87□□□□□ -0.99
SYF2-202ENST00000354361 NECTIN2Q92692 538 aa8.86□□□□□ -0.99
SYF2-202ENST00000354361 MLLT3P42568 568 aaPredicted RBP8.85□□□□□ -0.99
SYF2-202ENST00000354361 COPS2P61201 443 aa8.85□□□□□ -0.99
SYF2-202ENST00000354361 NKX2-3Q8TAU0 364 aa8.85□□□□□ -0.99
SYF2-202ENST00000354361 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.85□□□□□ -0.99
SYF2-202ENST00000354361 LCE2BO14633 110 aa8.84□□□□□ -0.99
SYF2-202ENST00000354361 EYA1Q99502 592 aa8.84□□□□□ -0.99
SYF2-202ENST00000354361 V9GY48 417 aaPredicted RBP8.83□□□□□ -1
SYF2-202ENST00000354361 SLC4A3P48751 1232 aa8.82□□□□□ -1
SYF2-202ENST00000354361 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
SYF2-202ENST00000354361 ARHGEF1Q92888 912 aaKnown RBP8.82□□□□□ -1
SYF2-202ENST00000354361 TSHZ2Q9NRE2 1034 aa8.81□□□□□ -1
SYF2-202ENST00000354361 NRG2O14511 850 aaPredicted RBP8.8□□□□□ -1
SYF2-202ENST00000354361 TRAF7Q6Q0C0 670 aa8.8□□□□□ -1
SYF2-202ENST00000354361 GGCXP38435 758 aa8.79□□□□□ -1
SYF2-202ENST00000354361 PTGDRQ13258 359 aa8.79□□□□□ -1
SYF2-202ENST00000354361 ZPR1O75312 459 aa8.78□□□□□ -1
SYF2-202ENST00000354361 PRR14Q9BWN1 585 aa8.78□□□□□ -1
SYF2-202ENST00000354361 PCDHB3Q9Y5E6 796 aa8.78□□□□□ -1
SYF2-202ENST00000354361 DNAJB2P25686 324 aa8.77□□□□□ -1.01
SYF2-202ENST00000354361 BLOC1S3Q6QNY0 202 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms