RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 MBD5Q9P267 1494 aa15.17■□□□□ 0.02
SVIP-201ENST00000354193 KDM5BQ9UGL1 1544 aa15.15■□□□□ 0.02
SVIP-201ENST00000354193 TMEM132EQ6IEE7 984 aa15.15■□□□□ 0.02
SVIP-201ENST00000354193 CFAP70Q5T0N1 1121 aa15.14■□□□□ 0.01
SVIP-201ENST00000354193 KIF7Q2M1P5 1343 aa15.14■□□□□ 0.01
SVIP-201ENST00000354193 CLASP1Q7Z460 1538 aa15.14■□□□□ 0.01
SVIP-201ENST00000354193 TNNT2P45379 298 aaPredicted RBP15.14■□□□□ 0.01
SVIP-201ENST00000354193 PZPP20742 1482 aa15.14■□□□□ 0.01
SVIP-201ENST00000354193 ZCCHC11Q5TAX3 1644 aaKnown RBP15.13■□□□□ 0.01
SVIP-201ENST00000354193 IRX6P78412 446 aaPredicted RBP15.12■□□□□ 0.01
SVIP-201ENST00000354193 ARHGEF12Q9NZN5 1544 aa15.12■□□□□ 0.01
SVIP-201ENST00000354193 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
SVIP-201ENST00000354193 RPRD2Q5VT52 1461 aaKnown RBP15.11■□□□□ 0.01
SVIP-201ENST00000354193 CDC42BPAQ5VT25 1732 aa15.11■□□□□ 0.01
SVIP-201ENST00000354193 FBXO31Q5XUX0 539 aaPredicted RBP15.1■□□□□ 0.01
SVIP-201ENST00000354193 TMF1P82094 1093 aa15.1■□□□□ 0.01
SVIP-201ENST00000354193 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
SVIP-201ENST00000354193 POGKQ9P215 609 aa15.07■□□□□ 0
SVIP-201ENST00000354193 CFAP65Q6ZU64 1925 aaKnown RBP15.07■□□□□ 0
SVIP-201ENST00000354193 CCDC7Q96M83 1385 aa15.07■□□□□ 0
SVIP-201ENST00000354193 CCDC184Q52MB2 194 aa15.06■□□□□ 0
SVIP-201ENST00000354193 UHRF1BP1LA0JNW5 1464 aa15.06■□□□□ 0
SVIP-201ENST00000354193 KNSTRNQ9Y448 316 aa15.06■□□□□ 0
SVIP-201ENST00000354193 DHX29Q7Z478 1369 aaKnown RBP15.06■□□□□ 0
SVIP-201ENST00000354193 ADCY10Q96PN6 1610 aa15.06■□□□□ 0
SVIP-201ENST00000354193 FKBP8Q14318 412 aa15.05■□□□□ 0
SVIP-201ENST00000354193 DENND4BO75064 1496 aaPredicted RBP15.04■□□□□ -0
SVIP-201ENST00000354193 ADGRL2O95490 1459 aa15.04■□□□□ -0
SVIP-201ENST00000354193 FAM135AQ9P2D6 1515 aa15.04■□□□□ -0
SVIP-201ENST00000354193 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
SVIP-201ENST00000354193 SHROOM2Q13796 1616 aa15.04■□□□□ -0
SVIP-201ENST00000354193 NUTM2FA1L443 756 aa15.04■□□□□ -0
SVIP-201ENST00000354193 PANK3Q9H999 370 aa15.03■□□□□ -0
SVIP-201ENST00000354193 SRPK2P78362 688 aaKnown RBP15.02■□□□□ -0
SVIP-201ENST00000354193 MYO5CQ9NQX4 1742 aa15.02□□□□□ -0.01
SVIP-201ENST00000354193 SHANK2Q9UPX8 1470 aa15.02□□□□□ -0.01
SVIP-201ENST00000354193 ADGRF5Q8IZF2 1346 aa15.02□□□□□ -0.01
SVIP-201ENST00000354193 CEBPAP49715 358 aaPredicted RBP15.01□□□□□ -0.01
SVIP-201ENST00000354193 CDC42BPBQ9Y5S2 1711 aa15.01□□□□□ -0.01
SVIP-201ENST00000354193 IDI1Q13907 227 aa15.01□□□□□ -0.01
SVIP-201ENST00000354193 GCC2Q8IWJ2 1684 aa15□□□□□ -0.01
SVIP-201ENST00000354193 PREX2Q70Z35 1606 aa15□□□□□ -0.01
SVIP-201ENST00000354193 DUOX2Q9NRD8 1548 aa14.99□□□□□ -0.01
SVIP-201ENST00000354193 ZNF518AQ6AHZ1 1483 aa14.98□□□□□ -0.01
SVIP-201ENST00000354193 CCER2I3L3R5 266 aa14.98□□□□□ -0.01
SVIP-201ENST00000354193 ERBINQ96RT1 1412 aa14.98□□□□□ -0.01
SVIP-201ENST00000354193 A2MP01023 1474 aa14.98□□□□□ -0.01
SVIP-201ENST00000354193 MINK1Q8N4C8 1332 aaPredicted RBP14.97□□□□□ -0.01
SVIP-201ENST00000354193 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
SVIP-201ENST00000354193 PELP1Q8IZL8 1130 aaKnown RBP14.97□□□□□ -0.01
SVIP-201ENST00000354193 VGFO15240 615 aaPredicted RBP14.96□□□□□ -0.01
SVIP-201ENST00000354193 CDCA8Q53HL2 280 aa14.96□□□□□ -0.01
SVIP-201ENST00000354193 SUPT16HQ9Y5B9 1047 aaKnown RBP14.96□□□□□ -0.02
SVIP-201ENST00000354193 YEATS2Q9ULM3 1422 aa14.95□□□□□ -0.02
SVIP-201ENST00000354193 ATP7AQ04656 1500 aa14.95□□□□□ -0.02
SVIP-201ENST00000354193 TSPOAP1O95153 1857 aa14.94□□□□□ -0.02
SVIP-201ENST00000354193 ABCC1P33527 1531 aa14.94□□□□□ -0.02
SVIP-201ENST00000354193 SOX12O15370 315 aa14.93□□□□□ -0.02
SVIP-201ENST00000354193 WDR43Q15061 677 aaKnown RBP eCLIP14.93□□□□□ -0.02
SVIP-201ENST00000354193 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
SVIP-201ENST00000354193 ARHGEF5Q12774 1597 aa14.93□□□□□ -0.02
SVIP-201ENST00000354193 TEX14Q8IWB6 1497 aa14.93□□□□□ -0.02
SVIP-201ENST00000354193 ADGBQ8N7X0 1667 aa14.91□□□□□ -0.02
SVIP-201ENST00000354193 CNTLNQ9NXG0 1405 aa14.91□□□□□ -0.02
SVIP-201ENST00000354193 RTEL1-TNFRSF6BF6WH68 1400 aa14.9□□□□□ -0.02
SVIP-201ENST00000354193 CABP2Q9NPB3 220 aa14.9□□□□□ -0.02
SVIP-201ENST00000354193 POGZQ7Z3K3 1410 aa14.89□□□□□ -0.03
SVIP-201ENST00000354193 C14orf37Q86TY3 774 aa14.89□□□□□ -0.03
SVIP-201ENST00000354193 KTN1Q86UP2 1357 aaKnown RBP14.88□□□□□ -0.03
SVIP-201ENST00000354193 CENPJQ9HC77 1338 aaPredicted RBP14.88□□□□□ -0.03
SVIP-201ENST00000354193 SLC12A5Q9H2X9 1139 aa14.88□□□□□ -0.03
SVIP-201ENST00000354193 NOS1P29475 1434 aa14.87□□□□□ -0.03
SVIP-201ENST00000354193 PLA2R1Q13018 1463 aa14.87□□□□□ -0.03
SVIP-201ENST00000354193 SLC26A8Q96RN1 970 aa14.87□□□□□ -0.03
SVIP-201ENST00000354193 UGGT1Q9NYU2 1555 aa14.86□□□□□ -0.03
SVIP-201ENST00000354193 SLC52A1Q9NWF4 448 aa14.86□□□□□ -0.03
SVIP-201ENST00000354193 MORC1Q86VD1 984 aa14.85□□□□□ -0.03
SVIP-201ENST00000354193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.85□□□□□ -0.03
SVIP-201ENST00000354193 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
SVIP-201ENST00000354193 PRAM1Q96QH2 718 aa14.85□□□□□ -0.03
SVIP-201ENST00000354193 PRAG1Q86YV5 1406 aa14.84□□□□□ -0.03
SVIP-201ENST00000354193 DISP3Q9P2K9 1392 aa14.84□□□□□ -0.03
SVIP-201ENST00000354193 TXNDC2Q86VQ3 553 aa14.84□□□□□ -0.03
SVIP-201ENST00000354193 CCDC146Q8IYE0 955 aa14.84□□□□□ -0.03
SVIP-201ENST00000354193 WAPLQ7Z5K2 1190 aa14.83□□□□□ -0.04
SVIP-201ENST00000354193 ZBTB7CA1YPR0 619 aa14.83□□□□□ -0.04
SVIP-201ENST00000354193 ZFYVE16Q7Z3T8 1539 aa14.82□□□□□ -0.04
SVIP-201ENST00000354193 RIMBP3CA6NJZ7 1639 aa14.82□□□□□ -0.04
SVIP-201ENST00000354193 RIMBP3BA6NNM3 1639 aa14.82□□□□□ -0.04
SVIP-201ENST00000354193 RIMBP3Q9UFD9 1639 aa14.82□□□□□ -0.04
SVIP-201ENST00000354193 NLRP13Q86W25 1043 aa14.81□□□□□ -0.04
SVIP-201ENST00000354193 U2SURPO15042 1029 aaKnown RBP14.81□□□□□ -0.04
SVIP-201ENST00000354193 RALBP1Q15311 655 aa14.81□□□□□ -0.04
SVIP-201ENST00000354193 HDGFP51858 240 aaKnown RBP14.81□□□□□ -0.04
SVIP-201ENST00000354193 RBM33Q96EV2 1170 aaKnown RBP14.81□□□□□ -0.04
SVIP-201ENST00000354193 TESK2Q96S53 571 aa14.8□□□□□ -0.04
SVIP-201ENST00000354193 NPATQ14207 1427 aa14.8□□□□□ -0.04
SVIP-201ENST00000354193 CROCC2H7BZ55 1655 aa14.8□□□□□ -0.04
SVIP-201ENST00000354193 EID1Q9Y6B2 187 aa14.8□□□□□ -0.04
SVIP-201ENST00000354193 MYBBP1AQ9BQG0 1328 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms