RNA–Protein interactions for RNA: ENST00000349721.7

SMARCA2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-203ENST00000349721 FAM43AQ8N2R8 423 aa18.4■□□□□ 0.54
SMARCA2-203ENST00000349721 CWC15Q9P013 229 aaKnown RBP18.4■□□□□ 0.54
SMARCA2-203ENST00000349721 CENPJQ9HC77 1338 aaPredicted RBP18.4■□□□□ 0.54
SMARCA2-203ENST00000349721 APPP05067 770 aa18.4■□□□□ 0.54
SMARCA2-203ENST00000349721 SPAG9O60271 1321 aaKnown RBP18.39■□□□□ 0.53
SMARCA2-203ENST00000349721 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
SMARCA2-203ENST00000349721 FOXD4L5Q5VV16 416 aaPredicted RBP18.39■□□□□ 0.53
SMARCA2-203ENST00000349721 FOXD4L4Q8WXT5 416 aaPredicted RBP18.39■□□□□ 0.53
SMARCA2-203ENST00000349721 FAM184AQ8NB25 1140 aa18.38■□□□□ 0.53
SMARCA2-203ENST00000349721 RUFY1Q96T51 708 aa18.38■□□□□ 0.53
SMARCA2-203ENST00000349721 MARCH6O60337 910 aa18.38■□□□□ 0.53
SMARCA2-203ENST00000349721 PHLDB1Q86UU1 1377 aa18.38■□□□□ 0.53
SMARCA2-203ENST00000349721 PDE4AP27815 886 aa18.38■□□□□ 0.53
SMARCA2-203ENST00000349721 HOMER1Q86YM7 354 aa18.37■□□□□ 0.53
SMARCA2-203ENST00000349721 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
SMARCA2-203ENST00000349721 CCDC66A2RUB6 948 aa18.36■□□□□ 0.53
SMARCA2-203ENST00000349721 ANKRD20A12PQ8NF67 263 aa18.36■□□□□ 0.53
SMARCA2-203ENST00000349721 HSP90B2PQ58FF3 399 aa18.35■□□□□ 0.53
SMARCA2-203ENST00000349721 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
SMARCA2-203ENST00000349721 SETD5Q9C0A6 1442 aa18.34■□□□□ 0.53
SMARCA2-203ENST00000349721 SOX12O15370 315 aa18.34■□□□□ 0.53
SMARCA2-203ENST00000349721 CCDC191Q8NCU4 936 aa18.34■□□□□ 0.53
SMARCA2-203ENST00000349721 DIAPH3Q9NSV4 1193 aa18.34■□□□□ 0.53
SMARCA2-203ENST00000349721 MNS1Q8NEH6 495 aa18.32■□□□□ 0.52
SMARCA2-203ENST00000349721 LMOD3Q0VAK6 560 aa18.32■□□□□ 0.52
SMARCA2-203ENST00000349721 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
SMARCA2-203ENST00000349721 RDXP35241 583 aaKnown RBP18.32■□□□□ 0.52
SMARCA2-203ENST00000349721 HOOK1Q9UJC3 728 aaKnown RBP18.31■□□□□ 0.52
SMARCA2-203ENST00000349721 CCDC47Q96A33 483 aaKnown RBP18.31■□□□□ 0.52
SMARCA2-203ENST00000349721 CHMP3Q9Y3E7 222 aa18.31■□□□□ 0.52
SMARCA2-203ENST00000349721 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
SMARCA2-203ENST00000349721 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
SMARCA2-203ENST00000349721 TOMM22Q9NS69 142 aa18.3■□□□□ 0.52
SMARCA2-203ENST00000349721 FHAD1B1AJZ9 1412 aa18.29■□□□□ 0.52
SMARCA2-203ENST00000349721 AKAP17AQ02040 695 aaKnown RBP18.29■□□□□ 0.52
SMARCA2-203ENST00000349721 PCMTD1Q96MG8 357 aaPredicted RBP18.29■□□□□ 0.52
SMARCA2-203ENST00000349721 KIF27Q86VH2 1401 aa18.29■□□□□ 0.52
SMARCA2-203ENST00000349721 ERCC4Q92889 916 aaPredicted RBP18.28■□□□□ 0.52
SMARCA2-203ENST00000349721 EIF3AQ14152 1382 aaKnown RBP18.28■□□□□ 0.52
SMARCA2-203ENST00000349721 G3V3G9 751 aa18.28■□□□□ 0.52
SMARCA2-203ENST00000349721 DCAF8Q5TAQ9 597 aa18.28■□□□□ 0.52
SMARCA2-203ENST00000349721 ROCK2O75116 1388 aaKnown RBP18.28■□□□□ 0.52
SMARCA2-203ENST00000349721 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
SMARCA2-203ENST00000349721 PKNOX2Q96KN3 472 aa18.28■□□□□ 0.52
SMARCA2-203ENST00000349721 CCDC39Q9UFE4 941 aa18.28■□□□□ 0.52
SMARCA2-203ENST00000349721 ZNF330Q9Y3S2 320 aaPredicted RBP18.27■□□□□ 0.52
SMARCA2-203ENST00000349721 H0YHG0 523 aa18.27■□□□□ 0.52
SMARCA2-203ENST00000349721 VPS53Q5VIR6 699 aa18.27■□□□□ 0.52
SMARCA2-203ENST00000349721 NLRP13Q86W25 1043 aa18.27■□□□□ 0.51
SMARCA2-203ENST00000349721 SLC4A10Q6U841 1118 aa18.27■□□□□ 0.51
SMARCA2-203ENST00000349721 SLC4A3P48751 1232 aa18.26■□□□□ 0.51
SMARCA2-203ENST00000349721 CPLX2Q6PUV4 134 aaKnown RBP18.26■□□□□ 0.51
SMARCA2-203ENST00000349721 IFT57Q9NWB7 429 aa18.25■□□□□ 0.51
SMARCA2-203ENST00000349721 SYNE3Q6ZMZ3 975 aa18.25■□□□□ 0.51
SMARCA2-203ENST00000349721 REC8O95072 547 aa18.24■□□□□ 0.51
SMARCA2-203ENST00000349721 TRIM29Q14134 588 aa18.24■□□□□ 0.51
SMARCA2-203ENST00000349721 MCTP1Q6DN14 999 aa18.23■□□□□ 0.51
SMARCA2-203ENST00000349721 SASS6Q6UVJ0 657 aa18.23■□□□□ 0.51
SMARCA2-203ENST00000349721 MRE11P49959 708 aa18.23■□□□□ 0.51
SMARCA2-203ENST00000349721 NUCB2P80303 420 aa18.23■□□□□ 0.51
SMARCA2-203ENST00000349721 RILPL2Q969X0 211 aa18.23■□□□□ 0.51
SMARCA2-203ENST00000349721 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
SMARCA2-203ENST00000349721 PAK3O75914 559 aaPredicted RBP18.22■□□□□ 0.51
SMARCA2-203ENST00000349721 LRRFIP1Q32MZ4 808 aaKnown RBP18.22■□□□□ 0.51
SMARCA2-203ENST00000349721 BICD2Q8TD16 824 aa18.21■□□□□ 0.51
SMARCA2-203ENST00000349721 R3HCC1Q9Y3T6 440 aaKnown RBP18.21■□□□□ 0.51
SMARCA2-203ENST00000349721 WRNQ14191 1432 aaPredicted RBP eCLIP18.21■□□□□ 0.51
SMARCA2-203ENST00000349721 TRHP20396 242 aaPredicted RBP18.21■□□□□ 0.51
SMARCA2-203ENST00000349721 SAFB2Q14151 953 aaKnown RBP eCLIP18.21■□□□□ 0.51
SMARCA2-203ENST00000349721 ANKRD45Q5TZF3 282 aa18.21■□□□□ 0.51
SMARCA2-203ENST00000349721 MLECQ14165 292 aa18.21■□□□□ 0.5
SMARCA2-203ENST00000349721 FOXD4L6Q3SYB3 417 aaPredicted RBP18.21■□□□□ 0.5
SMARCA2-203ENST00000349721 FOXD4L3Q6VB84 417 aaPredicted RBP18.21■□□□□ 0.5
SMARCA2-203ENST00000349721 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
SMARCA2-203ENST00000349721 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
SMARCA2-203ENST00000349721 RRP1P56182 461 aaKnown RBP18.18■□□□□ 0.5
SMARCA2-203ENST00000349721 LEKR1Q6ZMV7 388 aa18.18■□□□□ 0.5
SMARCA2-203ENST00000349721 PKD2Q13563 968 aa18.17■□□□□ 0.5
SMARCA2-203ENST00000349721 CCDC173Q0VFZ6 552 aa18.17■□□□□ 0.5
SMARCA2-203ENST00000349721 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
SMARCA2-203ENST00000349721 MYO6Q9UM54 1294 aa18.17■□□□□ 0.5
SMARCA2-203ENST00000349721 CCDC9Q9Y3X0 531 aaKnown RBP18.17■□□□□ 0.5
SMARCA2-203ENST00000349721 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
SMARCA2-203ENST00000349721 TERF2IPQ9NYB0 399 aa18.17■□□□□ 0.5
SMARCA2-203ENST00000349721 ARHGAP35Q9NRY4 1499 aa18.16■□□□□ 0.5
SMARCA2-203ENST00000349721 KIF15Q9NS87 1388 aa18.16■□□□□ 0.5
SMARCA2-203ENST00000349721 NAT10Q9H0A0 1025 aaKnown RBP18.16■□□□□ 0.5
SMARCA2-203ENST00000349721 HMGN5P82970 282 aaKnown RBP18.15■□□□□ 0.5
SMARCA2-203ENST00000349721 CCP110O43303 1012 aa18.15■□□□□ 0.5
SMARCA2-203ENST00000349721 MYBBP1AQ9BQG0 1328 aaKnown RBP18.15■□□□□ 0.5
SMARCA2-203ENST00000349721 NASPP49321 788 aaPredicted RBP18.15■□□□□ 0.5
SMARCA2-203ENST00000349721 NAP1L1P55209 391 aaKnown RBP18.14■□□□□ 0.5
SMARCA2-203ENST00000349721 CCDC73Q6ZRK6 1079 aa18.14■□□□□ 0.5
SMARCA2-203ENST00000349721 ERCC6Q03468 1493 aa18.14■□□□□ 0.49
SMARCA2-203ENST00000349721 E9PSI1 815 aa18.14■□□□□ 0.49
SMARCA2-203ENST00000349721 STK26Q9P289 416 aa18.14■□□□□ 0.49
SMARCA2-203ENST00000349721 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.49
SMARCA2-203ENST00000349721 LETM1O95202 739 aaPredicted RBP18.14■□□□□ 0.49
SMARCA2-203ENST00000349721 KRI1Q8N9T8 703 aaKnown RBP18.13■□□□□ 0.49
SMARCA2-203ENST00000349721 ANO2Q9NQ90 1003 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms