RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 ARHGEF5Q12774 1597 aa23.75■■□□□ 1.39
SMARCC2-202ENST00000347471 KIF7Q2M1P5 1343 aa23.75■■□□□ 1.39
SMARCC2-202ENST00000347471 ROCK2O75116 1388 aaKnown RBP23.74■■□□□ 1.39
SMARCC2-202ENST00000347471 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
SMARCC2-202ENST00000347471 CD109Q6YHK3 1445 aa23.72■■□□□ 1.39
SMARCC2-202ENST00000347471 CCDC7Q96M83 1385 aa23.71■■□□□ 1.39
SMARCC2-202ENST00000347471 HNRNPUQ00839 825 aaKnown RBP eCLIP23.7■■□□□ 1.39
SMARCC2-202ENST00000347471 FAM69CQ0P6D2 419 aa23.69■■□□□ 1.38
SMARCC2-202ENST00000347471 MRS2Q9HD23 443 aa23.68■■□□□ 1.38
SMARCC2-202ENST00000347471 KANK1Q14678 1352 aa23.67■■□□□ 1.38
SMARCC2-202ENST00000347471 CCDC184Q52MB2 194 aa23.65■■□□□ 1.38
SMARCC2-202ENST00000347471 BCANQ96GW7 911 aa23.65■■□□□ 1.38
SMARCC2-202ENST00000347471 ABCC1P33527 1531 aa23.64■■□□□ 1.37
SMARCC2-202ENST00000347471 NUTM2DQ5VT03 806 aaPredicted RBP23.62■■□□□ 1.37
SMARCC2-202ENST00000347471 DUOX2Q9NRD8 1548 aa23.62■■□□□ 1.37
SMARCC2-202ENST00000347471 CCER2I3L3R5 266 aa23.62■■□□□ 1.37
SMARCC2-202ENST00000347471 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
SMARCC2-202ENST00000347471 MLECQ14165 292 aa23.59■■□□□ 1.37
SMARCC2-202ENST00000347471 PRKRIP1Q9H875 184 aaPredicted RBP23.58■■□□□ 1.36
SMARCC2-202ENST00000347471 ERBINQ96RT1 1412 aa23.57■■□□□ 1.36
SMARCC2-202ENST00000347471 PLA2R1Q13018 1463 aa23.56■■□□□ 1.36
SMARCC2-202ENST00000347471 CNTLNQ9NXG0 1405 aa23.55■■□□□ 1.36
SMARCC2-202ENST00000347471 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
SMARCC2-202ENST00000347471 ATP7AQ04656 1500 aa23.51■■□□□ 1.35
SMARCC2-202ENST00000347471 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
SMARCC2-202ENST00000347471 SPATA31E1Q6ZUB1 1445 aa23.48■■□□□ 1.35
SMARCC2-202ENST00000347471 RTEL1-TNFRSF6BF6WH68 1400 aa23.47■■□□□ 1.35
SMARCC2-202ENST00000347471 ZFYVE16Q7Z3T8 1539 aa23.47■■□□□ 1.35
SMARCC2-202ENST00000347471 KDM5DQ9BY66 1539 aa23.47■■□□□ 1.35
SMARCC2-202ENST00000347471 CC2D1BQ5T0F9 858 aaKnown RBP23.47■■□□□ 1.35
SMARCC2-202ENST00000347471 SALL2Q9Y467 1007 aaPredicted RBP23.46■■□□□ 1.35
SMARCC2-202ENST00000347471 MAST1Q9Y2H9 1570 aa23.46■■□□□ 1.35
SMARCC2-202ENST00000347471 NEFLP07196 543 aa23.46■■□□□ 1.35
SMARCC2-202ENST00000347471 FKBP8Q14318 412 aa23.46■■□□□ 1.35
SMARCC2-202ENST00000347471 TMC1Q8TDI8 760 aa23.45■■□□□ 1.35
SMARCC2-202ENST00000347471 CFAP70Q5T0N1 1121 aa23.45■■□□□ 1.34
SMARCC2-202ENST00000347471 A2MP01023 1474 aa23.45■■□□□ 1.34
SMARCC2-202ENST00000347471 ZNF518AQ6AHZ1 1483 aa23.44■■□□□ 1.34
SMARCC2-202ENST00000347471 PLXNC1O60486 1568 aa23.44■■□□□ 1.34
SMARCC2-202ENST00000347471 IRX6P78412 446 aaPredicted RBP23.43■■□□□ 1.34
SMARCC2-202ENST00000347471 PRAG1Q86YV5 1406 aa23.43■■□□□ 1.34
SMARCC2-202ENST00000347471 ABCA9Q8IUA7 1624 aa23.43■■□□□ 1.34
SMARCC2-202ENST00000347471 RALGAPBQ86X10 1494 aa23.41■■□□□ 1.34
SMARCC2-202ENST00000347471 TMF1P82094 1093 aa23.4■■□□□ 1.34
SMARCC2-202ENST00000347471 STAG3Q9UJ98 1225 aa23.4■■□□□ 1.34
SMARCC2-202ENST00000347471 UHRF1BP1Q6BDS2 1440 aa23.38■■□□□ 1.33
SMARCC2-202ENST00000347471 ADGRF5Q8IZF2 1346 aa23.37■■□□□ 1.33
SMARCC2-202ENST00000347471 SAFB2Q14151 953 aaKnown RBP eCLIP23.37■■□□□ 1.33
SMARCC2-202ENST00000347471 UNC13BO14795 1591 aa23.37■■□□□ 1.33
SMARCC2-202ENST00000347471 SUPT16HQ9Y5B9 1047 aaKnown RBP23.37■■□□□ 1.33
SMARCC2-202ENST00000347471 POGZQ7Z3K3 1410 aa23.36■■□□□ 1.33
SMARCC2-202ENST00000347471 CFAP65Q6ZU64 1925 aaKnown RBP23.36■■□□□ 1.33
SMARCC2-202ENST00000347471 TMEM132EQ6IEE7 984 aa23.36■■□□□ 1.33
SMARCC2-202ENST00000347471 UGGT1Q9NYU2 1555 aa23.36■■□□□ 1.33
SMARCC2-202ENST00000347471 PANK3Q9H999 370 aa23.35■■□□□ 1.33
SMARCC2-202ENST00000347471 TRAK1Q9UPV9 953 aa23.35■■□□□ 1.33
SMARCC2-202ENST00000347471 ARAP3Q8WWN8 1544 aa23.35■■□□□ 1.33
SMARCC2-202ENST00000347471 ATP10AO60312 1499 aa23.34■■□□□ 1.33
SMARCC2-202ENST00000347471 ARID4BQ4LE39 1312 aaPredicted RBP23.34■■□□□ 1.33
SMARCC2-202ENST00000347471 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.33
SMARCC2-202ENST00000347471 YEATS2Q9ULM3 1422 aa23.31■■□□□ 1.32
SMARCC2-202ENST00000347471 DISP3Q9P2K9 1392 aa23.31■■□□□ 1.32
SMARCC2-202ENST00000347471 ESF1Q9H501 851 aaKnown RBP23.3■■□□□ 1.32
SMARCC2-202ENST00000347471 STK26Q9P289 416 aa23.3■■□□□ 1.32
SMARCC2-202ENST00000347471 FBXO31Q5XUX0 539 aaPredicted RBP23.29■■□□□ 1.32
SMARCC2-202ENST00000347471 BCORL1Q5H9F3 1711 aa23.28■■□□□ 1.32
SMARCC2-202ENST00000347471 TESK2Q96S53 571 aa23.28■■□□□ 1.32
SMARCC2-202ENST00000347471 KDM5CP41229 1560 aa23.27■■□□□ 1.32
SMARCC2-202ENST00000347471 TRHP20396 242 aaPredicted RBP23.26■■□□□ 1.31
SMARCC2-202ENST00000347471 MAGI2Q86UL8 1455 aa23.24■■□□□ 1.31
SMARCC2-202ENST00000347471 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
SMARCC2-202ENST00000347471 KNSTRNQ9Y448 316 aa23.24■■□□□ 1.31
SMARCC2-202ENST00000347471 IDI1Q13907 227 aa23.23■■□□□ 1.31
SMARCC2-202ENST00000347471 E9PCH4 1651 aa23.23■■□□□ 1.31
SMARCC2-202ENST00000347471 KIDINS220Q9ULH0 1771 aa23.22■■□□□ 1.31
SMARCC2-202ENST00000347471 RIMBP3CA6NJZ7 1639 aa23.21■■□□□ 1.31
SMARCC2-202ENST00000347471 RIMBP3BA6NNM3 1639 aa23.21■■□□□ 1.31
SMARCC2-202ENST00000347471 RIMBP3Q9UFD9 1639 aa23.21■■□□□ 1.31
SMARCC2-202ENST00000347471 NOS1P29475 1434 aa23.21■■□□□ 1.31
SMARCC2-202ENST00000347471 NPATQ14207 1427 aa23.21■■□□□ 1.31
SMARCC2-202ENST00000347471 TSPOAP1O95153 1857 aa23.2■■□□□ 1.3
SMARCC2-202ENST00000347471 KTN1Q86UP2 1357 aaKnown RBP23.19■■□□□ 1.3
SMARCC2-202ENST00000347471 PRDM15P57071 1507 aaPredicted RBP23.19■■□□□ 1.3
SMARCC2-202ENST00000347471 TNNT2P45379 298 aaPredicted RBP23.19■■□□□ 1.3
SMARCC2-202ENST00000347471 NEO1Q92859 1461 aa23.17■■□□□ 1.3
SMARCC2-202ENST00000347471 MLH3Q9UHC1 1453 aa23.17■■□□□ 1.3
SMARCC2-202ENST00000347471 PTPRTO14522 1441 aa23.17■■□□□ 1.3
SMARCC2-202ENST00000347471 CLTCL1P53675 1640 aa23.16■■□□□ 1.3
SMARCC2-202ENST00000347471 TRPM2O94759 1503 aa23.15■■□□□ 1.3
SMARCC2-202ENST00000347471 MYBBP1AQ9BQG0 1328 aaKnown RBP23.14■■□□□ 1.3
SMARCC2-202ENST00000347471 RALBP1Q15311 655 aa23.14■■□□□ 1.29
SMARCC2-202ENST00000347471 CDCA8Q53HL2 280 aa23.14■■□□□ 1.29
SMARCC2-202ENST00000347471 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.29
SMARCC2-202ENST00000347471 GPRASP1Q5JY77 1395 aa23.14■■□□□ 1.29
SMARCC2-202ENST00000347471 EIF3AQ14152 1382 aaKnown RBP23.11■■□□□ 1.29
SMARCC2-202ENST00000347471 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
SMARCC2-202ENST00000347471 VGFO15240 615 aaPredicted RBP23.1■■□□□ 1.29
SMARCC2-202ENST00000347471 TET3O43151 1660 aa23.1■■□□□ 1.29
SMARCC2-202ENST00000347471 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
SMARCC2-202ENST00000347471 TRPM1Q7Z4N2 1603 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms