RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 KIF15Q9NS87 1388 aa20.25■□□□□ 0.83
RTL6-201ENST00000341255 NGDNQ8NEJ9 315 aaKnown RBP20.24■□□□□ 0.83
RTL6-201ENST00000341255 EXOC6Q8TAG9 804 aa20.24■□□□□ 0.83
RTL6-201ENST00000341255 MYBBP1AQ9BQG0 1328 aaKnown RBP20.24■□□□□ 0.83
RTL6-201ENST00000341255 ISY1Q9ULR0 285 aaKnown RBP20.24■□□□□ 0.83
RTL6-201ENST00000341255 HTATSF1O43719 755 aaKnown RBP20.23■□□□□ 0.83
RTL6-201ENST00000341255 PLIN1O60240 522 aa20.23■□□□□ 0.83
RTL6-201ENST00000341255 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
RTL6-201ENST00000341255 ST20-MTHFSA0A0A6YYL1 179 aa20.23■□□□□ 0.83
RTL6-201ENST00000341255 GSE1Q14687 1217 aa20.23■□□□□ 0.83
RTL6-201ENST00000341255 CCDC144AA2RUR9 1427 aa20.23■□□□□ 0.83
RTL6-201ENST00000341255 FAM161AQ3B820 660 aa20.23■□□□□ 0.83
RTL6-201ENST00000341255 CENPQQ7L2Z9 268 aaPredicted RBP20.23■□□□□ 0.83
RTL6-201ENST00000341255 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
RTL6-201ENST00000341255 TRIM6-TRIM34B2RNG4 842 aa20.22■□□□□ 0.83
RTL6-201ENST00000341255 PRKRIP1Q9H875 184 aaPredicted RBP20.22■□□□□ 0.83
RTL6-201ENST00000341255 TRAK1Q9UPV9 953 aa20.22■□□□□ 0.83
RTL6-201ENST00000341255 FANCIQ9NVI1 1328 aa20.22■□□□□ 0.83
RTL6-201ENST00000341255 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
RTL6-201ENST00000341255 RRP1P56182 461 aaKnown RBP20.21■□□□□ 0.83
RTL6-201ENST00000341255 ZBED9Q6R2W3 1325 aa20.21■□□□□ 0.83
RTL6-201ENST00000341255 GORABQ5T7V8 394 aa20.2■□□□□ 0.82
RTL6-201ENST00000341255 SLC4A10Q6U841 1118 aa20.2■□□□□ 0.82
RTL6-201ENST00000341255 AMPHP49418 695 aa20.2■□□□□ 0.82
RTL6-201ENST00000341255 DDX11L8A8MPP1 907 aa20.19■□□□□ 0.82
RTL6-201ENST00000341255 PANK3Q9H999 370 aa20.18■□□□□ 0.82
RTL6-201ENST00000341255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
RTL6-201ENST00000341255 CRBNQ96SW2 442 aa20.17■□□□□ 0.82
RTL6-201ENST00000341255 RSPH6AQ9H0K4 717 aa20.16■□□□□ 0.82
RTL6-201ENST00000341255 CHMP3Q9Y3E7 222 aa20.16■□□□□ 0.82
RTL6-201ENST00000341255 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
RTL6-201ENST00000341255 HSP90AA2PQ14568 343 aaPredicted RBP20.16■□□□□ 0.82
RTL6-201ENST00000341255 RRP7AQ9Y3A4 280 aaKnown RBP20.16■□□□□ 0.82
RTL6-201ENST00000341255 UACAQ9BZF9 1416 aa20.16■□□□□ 0.82
RTL6-201ENST00000341255 TAF7LQ5H9L4 462 aa20.15■□□□□ 0.82
RTL6-201ENST00000341255 FOXD4L5Q5VV16 416 aaPredicted RBP20.15■□□□□ 0.82
RTL6-201ENST00000341255 FOXD4L4Q8WXT5 416 aaPredicted RBP20.15■□□□□ 0.82
RTL6-201ENST00000341255 ST18O60284 1047 aa20.15■□□□□ 0.82
RTL6-201ENST00000341255 CSPP1Q1MSJ5 1256 aa20.13■□□□□ 0.81
RTL6-201ENST00000341255 TPM4P67936 248 aa20.13■□□□□ 0.81
RTL6-201ENST00000341255 BCL2L13Q9BXK5 485 aa20.12■□□□□ 0.81
RTL6-201ENST00000341255 VGFO15240 615 aaPredicted RBP20.12■□□□□ 0.81
RTL6-201ENST00000341255 CLSTN1O94985 981 aa20.12■□□□□ 0.81
RTL6-201ENST00000341255 HSP90B1P14625 803 aaKnown RBP20.12■□□□□ 0.81
RTL6-201ENST00000341255 LTV1Q96GA3 475 aaPredicted RBP20.11■□□□□ 0.81
RTL6-201ENST00000341255 PHF14O94880 888 aa20.11■□□□□ 0.81
RTL6-201ENST00000341255 NUTM2FA1L443 756 aa20.11■□□□□ 0.81
RTL6-201ENST00000341255 DDX49Q9Y6V7 483 aaKnown RBP20.1■□□□□ 0.81
RTL6-201ENST00000341255 CGNL1Q0VF96 1302 aa20.1■□□□□ 0.81
RTL6-201ENST00000341255 CCDC34Q96HJ3 373 aa20.09■□□□□ 0.81
RTL6-201ENST00000341255 USP47Q96K76 1375 aa20.08■□□□□ 0.81
RTL6-201ENST00000341255 PTPRGP23470 1445 aa20.08■□□□□ 0.81
RTL6-201ENST00000341255 E9PSI1 815 aa20.08■□□□□ 0.81
RTL6-201ENST00000341255 EVC2Q86UK5 1308 aa20.08■□□□□ 0.81
RTL6-201ENST00000341255 TNNT3P45378 269 aaPredicted RBP20.07■□□□□ 0.8
RTL6-201ENST00000341255 COG6Q9Y2V7 657 aa20.07■□□□□ 0.8
RTL6-201ENST00000341255 TMX4Q9H1E5 349 aaPredicted RBP20.07■□□□□ 0.8
RTL6-201ENST00000341255 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
RTL6-201ENST00000341255 ANKRD45Q5TZF3 282 aa20.06■□□□□ 0.8
RTL6-201ENST00000341255 CCDC9Q9Y3X0 531 aaKnown RBP20.06■□□□□ 0.8
RTL6-201ENST00000341255 COG3Q96JB2 828 aa20.06■□□□□ 0.8
RTL6-201ENST00000341255 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
RTL6-201ENST00000341255 SKOR2Q2VWA4 1001 aaPredicted RBP20.06■□□□□ 0.8
RTL6-201ENST00000341255 ZKSCAN2Q63HK3 967 aa20.05■□□□□ 0.8
RTL6-201ENST00000341255 KIF16BQ96L93 1317 aa20.04■□□□□ 0.8
RTL6-201ENST00000341255 ELL2O00472 640 aaPredicted RBP20.03■□□□□ 0.8
RTL6-201ENST00000341255 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
RTL6-201ENST00000341255 KIF3AQ9Y496 699 aa20.02■□□□□ 0.8
RTL6-201ENST00000341255 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
RTL6-201ENST00000341255 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
RTL6-201ENST00000341255 VSIG10Q8N0Z9 540 aa20■□□□□ 0.79
RTL6-201ENST00000341255 APAF1O14727 1248 aa19.99■□□□□ 0.79
RTL6-201ENST00000341255 NOC3LQ8WTT2 800 aaKnown RBP19.99■□□□□ 0.79
RTL6-201ENST00000341255 RILPL2Q969X0 211 aa19.99■□□□□ 0.79
RTL6-201ENST00000341255 NGEFQ8N5V2 710 aa19.99■□□□□ 0.79
RTL6-201ENST00000341255 GOLGA6L1Q8N7Z2 621 aa19.98■□□□□ 0.79
RTL6-201ENST00000341255 MINK1Q8N4C8 1332 aaPredicted RBP19.97■□□□□ 0.79
RTL6-201ENST00000341255 MYOM3Q5VTT5 1437 aa19.97■□□□□ 0.79
RTL6-201ENST00000341255 GTF2E1P29083 439 aaPredicted RBP19.96■□□□□ 0.79
RTL6-201ENST00000341255 C1orf141Q5JVX7 400 aa19.96■□□□□ 0.79
RTL6-201ENST00000341255 TOMM22Q9NS69 142 aa19.96■□□□□ 0.79
RTL6-201ENST00000341255 TEFQ10587 303 aa19.96■□□□□ 0.79
RTL6-201ENST00000341255 SF3A1Q15459 793 aaKnown RBP19.95■□□□□ 0.78
RTL6-201ENST00000341255 RASSF8Q8NHQ8 419 aa19.95■□□□□ 0.78
RTL6-201ENST00000341255 FRAT2O75474 233 aaPredicted RBP19.94■□□□□ 0.78
RTL6-201ENST00000341255 CREBRFQ8IUR6 639 aa19.94■□□□□ 0.78
RTL6-201ENST00000341255 CHMP5Q9NZZ3 219 aa19.94■□□□□ 0.78
RTL6-201ENST00000341255 DIAPH1O60610 1272 aaKnown RBP19.93■□□□□ 0.78
RTL6-201ENST00000341255 ATP6V1DQ9Y5K8 247 aa19.93■□□□□ 0.78
RTL6-201ENST00000341255 IGF1RP08069 1367 aa19.92■□□□□ 0.78
RTL6-201ENST00000341255 DDX19BQ9UMR2 479 aa19.92■□□□□ 0.78
RTL6-201ENST00000341255 H3BQV1 296 aa19.92■□□□□ 0.78
RTL6-201ENST00000341255 IFFO2Q5TF58 517 aa19.92■□□□□ 0.78
RTL6-201ENST00000341255 CHMP4CQ96CF2 233 aa19.91■□□□□ 0.78
RTL6-201ENST00000341255 G3V3G9 751 aa19.91■□□□□ 0.78
RTL6-201ENST00000341255 DCAF8Q5TAQ9 597 aa19.91■□□□□ 0.78
RTL6-201ENST00000341255 STAC3Q96MF2 364 aa19.91■□□□□ 0.78
RTL6-201ENST00000341255 GOLGA6L19H0YKK7 550 aa19.9■□□□□ 0.78
RTL6-201ENST00000341255 NFKBIBQ15653 356 aa19.89■□□□□ 0.78
RTL6-201ENST00000341255 GAPVD1Q14C86 1478 aa19.89■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms