RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 PTPRKQ15262 1439 aa10□□□□□ -0.81
HIPK1-201ENST00000340480 ANP32AP39687 249 aaKnown RBP9.99□□□□□ -0.81
HIPK1-201ENST00000340480 CDK11BP21127 795 aaKnown RBP9.99□□□□□ -0.81
HIPK1-201ENST00000340480 ADGRL2O95490 1459 aa9.99□□□□□ -0.81
HIPK1-201ENST00000340480 KIF7Q2M1P5 1343 aa9.99□□□□□ -0.81
HIPK1-201ENST00000340480 SUPT16HQ9Y5B9 1047 aaKnown RBP9.98□□□□□ -0.81
HIPK1-201ENST00000340480 PLCH2O75038 1416 aa9.98□□□□□ -0.81
HIPK1-201ENST00000340480 ABCC2Q92887 1545 aa9.98□□□□□ -0.81
HIPK1-201ENST00000340480 DNMT1P26358 1616 aaKnown RBP9.98□□□□□ -0.81
HIPK1-201ENST00000340480 NGEFQ8N5V2 710 aa9.98□□□□□ -0.81
HIPK1-201ENST00000340480 SCAPERQ9BY12 1400 aa9.97□□□□□ -0.81
HIPK1-201ENST00000340480 A0A0G2JS52 829 aa9.97□□□□□ -0.81
HIPK1-201ENST00000340480 AFAP1Q8N556 730 aa9.97□□□□□ -0.81
HIPK1-201ENST00000340480 ZBED9Q6R2W3 1325 aa9.96□□□□□ -0.81
HIPK1-201ENST00000340480 CEP170Q5SW79 1584 aa9.96□□□□□ -0.81
HIPK1-201ENST00000340480 ERBINQ96RT1 1412 aa9.96□□□□□ -0.82
HIPK1-201ENST00000340480 CC2D1BQ5T0F9 858 aaKnown RBP9.95□□□□□ -0.82
HIPK1-201ENST00000340480 RPGRIP1LQ68CZ1 1315 aa9.94□□□□□ -0.82
HIPK1-201ENST00000340480 MS4A1P11836 297 aa9.94□□□□□ -0.82
HIPK1-201ENST00000340480 MORC1Q86VD1 984 aa9.94□□□□□ -0.82
HIPK1-201ENST00000340480 DUOX2Q9NRD8 1548 aa9.94□□□□□ -0.82
HIPK1-201ENST00000340480 ADGRL1O94910 1474 aa9.94□□□□□ -0.82
HIPK1-201ENST00000340480 HDGFL2Q7Z4V5 671 aaPredicted RBP9.94□□□□□ -0.82
HIPK1-201ENST00000340480 HAP1P54257 671 aaPredicted RBP9.93□□□□□ -0.82
HIPK1-201ENST00000340480 SALL2Q9Y467 1007 aaPredicted RBP9.93□□□□□ -0.82
HIPK1-201ENST00000340480 MAPK8IP3Q9UPT6 1336 aa9.93□□□□□ -0.82
HIPK1-201ENST00000340480 TERF2IPQ9NYB0 399 aa9.93□□□□□ -0.82
HIPK1-201ENST00000340480 BRD4O60885 1362 aaPredicted RBP9.93□□□□□ -0.82
HIPK1-201ENST00000340480 NBPF8Q3BBV2 869 aa9.93□□□□□ -0.82
HIPK1-201ENST00000340480 CYB5RLQ6IPT4 315 aa9.93□□□□□ -0.82
HIPK1-201ENST00000340480 RTEL1-TNFRSF6BF6WH68 1400 aa9.92□□□□□ -0.82
HIPK1-201ENST00000340480 ABCA8O94911 1581 aa9.92□□□□□ -0.82
HIPK1-201ENST00000340480 C14orf37Q86TY3 774 aa9.92□□□□□ -0.82
HIPK1-201ENST00000340480 ARHGEF12Q9NZN5 1544 aa9.92□□□□□ -0.82
HIPK1-201ENST00000340480 SRPK2P78362 688 aaKnown RBP9.91□□□□□ -0.82
HIPK1-201ENST00000340480 CD109Q6YHK3 1445 aa9.91□□□□□ -0.82
HIPK1-201ENST00000340480 FANCAO15360 1455 aa9.91□□□□□ -0.82
HIPK1-201ENST00000340480 WDR7Q9Y4E6 1490 aa9.91□□□□□ -0.82
HIPK1-201ENST00000340480 CHMP4BQ9H444 224 aaKnown RBP9.91□□□□□ -0.82
HIPK1-201ENST00000340480 SLC52A1Q9NWF4 448 aa9.91□□□□□ -0.82
HIPK1-201ENST00000340480 EVC2Q86UK5 1308 aa9.91□□□□□ -0.82
HIPK1-201ENST00000340480 UHRF1BP1LA0JNW5 1464 aa9.91□□□□□ -0.82
HIPK1-201ENST00000340480 GCC2Q8IWJ2 1684 aa9.91□□□□□ -0.82
HIPK1-201ENST00000340480 CENPJQ9HC77 1338 aaPredicted RBP9.9□□□□□ -0.82
HIPK1-201ENST00000340480 ANP32BQ92688 251 aaKnown RBP9.9□□□□□ -0.83
HIPK1-201ENST00000340480 MAGI3Q5TCQ9 1506 aa9.9□□□□□ -0.83
HIPK1-201ENST00000340480 DHX29Q7Z478 1369 aaKnown RBP9.9□□□□□ -0.83
HIPK1-201ENST00000340480 ARHGEF5Q12774 1597 aa9.9□□□□□ -0.83
HIPK1-201ENST00000340480 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.89□□□□□ -0.83
HIPK1-201ENST00000340480 FAM69CQ0P6D2 419 aa9.89□□□□□ -0.83
HIPK1-201ENST00000340480 PANK3Q9H999 370 aa9.89□□□□□ -0.83
HIPK1-201ENST00000340480 UPF2Q9HAU5 1272 aaKnown RBP9.89□□□□□ -0.83
HIPK1-201ENST00000340480 SYCP2Q9BX26 1530 aa9.88□□□□□ -0.83
HIPK1-201ENST00000340480 ABCC10Q5T3U5 1492 aa9.87□□□□□ -0.83
HIPK1-201ENST00000340480 RALGAPBQ86X10 1494 aa9.87□□□□□ -0.83
HIPK1-201ENST00000340480 PPP6R1Q9UPN7 881 aa9.87□□□□□ -0.83
HIPK1-201ENST00000340480 EIF5BO60841 1220 aaKnown RBP9.87□□□□□ -0.83
HIPK1-201ENST00000340480 CGNL1Q0VF96 1302 aa9.87□□□□□ -0.83
HIPK1-201ENST00000340480 MLECQ14165 292 aa9.87□□□□□ -0.83
HIPK1-201ENST00000340480 CALD1Q05682 793 aaKnown RBP9.86□□□□□ -0.83
HIPK1-201ENST00000340480 DENND4BO75064 1496 aaPredicted RBP9.86□□□□□ -0.83
HIPK1-201ENST00000340480 EID1Q9Y6B2 187 aa9.86□□□□□ -0.83
HIPK1-201ENST00000340480 ZNF518AQ6AHZ1 1483 aa9.86□□□□□ -0.83
HIPK1-201ENST00000340480 HSP90AA1P07900 732 aaKnown RBP9.85□□□□□ -0.83
HIPK1-201ENST00000340480 IRX6P78412 446 aaPredicted RBP9.85□□□□□ -0.83
HIPK1-201ENST00000340480 RCAN3Q9UKA8 241 aa9.85□□□□□ -0.83
HIPK1-201ENST00000340480 ASXL2Q76L83 1435 aa9.85□□□□□ -0.83
HIPK1-201ENST00000340480 FAM135AQ9P2D6 1515 aa9.85□□□□□ -0.83
HIPK1-201ENST00000340480 PZPP20742 1482 aa9.84□□□□□ -0.83
HIPK1-201ENST00000340480 TRAK1Q9UPV9 953 aa9.84□□□□□ -0.83
HIPK1-201ENST00000340480 ADGBQ8N7X0 1667 aa9.84□□□□□ -0.83
HIPK1-201ENST00000340480 GOLGA2Q08379 1002 aa9.84□□□□□ -0.83
HIPK1-201ENST00000340480 MYH16Q9H6N6 1097 aa9.83□□□□□ -0.84
HIPK1-201ENST00000340480 TEX14Q8IWB6 1497 aa9.83□□□□□ -0.84
HIPK1-201ENST00000340480 KDM5BQ9UGL1 1544 aa9.83□□□□□ -0.84
HIPK1-201ENST00000340480 UHRF1BP1Q6BDS2 1440 aa9.83□□□□□ -0.84
HIPK1-201ENST00000340480 STK26Q9P289 416 aa9.83□□□□□ -0.84
HIPK1-201ENST00000340480 EIF2AK4Q9P2K8 1649 aaKnown RBP9.82□□□□□ -0.84
HIPK1-201ENST00000340480 ADCY10Q96PN6 1610 aa9.82□□□□□ -0.84
HIPK1-201ENST00000340480 ZBTB7CA1YPR0 619 aa9.81□□□□□ -0.84
HIPK1-201ENST00000340480 DDRGK1Q96HY6 314 aa9.81□□□□□ -0.84
HIPK1-201ENST00000340480 U2SURPO15042 1029 aaKnown RBP9.81□□□□□ -0.84
HIPK1-201ENST00000340480 A2MP01023 1474 aa9.8□□□□□ -0.84
HIPK1-201ENST00000340480 SCAF11Q99590 1463 aaKnown RBP9.8□□□□□ -0.84
HIPK1-201ENST00000340480 TRHP20396 242 aaPredicted RBP9.8□□□□□ -0.84
HIPK1-201ENST00000340480 NBPF1Q3BBV0 1214 aa9.8□□□□□ -0.84
HIPK1-201ENST00000340480 ARAP3Q8WWN8 1544 aa9.8□□□□□ -0.84
HIPK1-201ENST00000340480 MBD5Q9P267 1494 aa9.8□□□□□ -0.84
HIPK1-201ENST00000340480 FTSJ3Q8IY81 847 aaKnown RBP9.8□□□□□ -0.84
HIPK1-201ENST00000340480 CFAP70Q5T0N1 1121 aa9.79□□□□□ -0.84
HIPK1-201ENST00000340480 CHMP4AQ9BY43 222 aa9.79□□□□□ -0.84
HIPK1-201ENST00000340480 TRAPPC8Q9Y2L5 1435 aa9.79□□□□□ -0.84
HIPK1-201ENST00000340480 U2AF1L5P0DN76 240 aaPredicted RBP9.79□□□□□ -0.84
HIPK1-201ENST00000340480 U2AF1Q01081 240 aaKnown RBP eCLIP9.79□□□□□ -0.84
HIPK1-201ENST00000340480 LMOD3Q0VAK6 560 aa9.79□□□□□ -0.84
HIPK1-201ENST00000340480 POGZQ7Z3K3 1410 aa9.79□□□□□ -0.84
HIPK1-201ENST00000340480 SAFB2Q14151 953 aaKnown RBP eCLIP9.79□□□□□ -0.84
HIPK1-201ENST00000340480 PRAG1Q86YV5 1406 aa9.78□□□□□ -0.84
HIPK1-201ENST00000340480 TNNT2P45379 298 aaPredicted RBP9.78□□□□□ -0.84
HIPK1-201ENST00000340480 E9PSI1 815 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms