RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 TSPY4P0CV99 314 aa19.16■□□□□ 0.66
PRIM1-201ENST00000338193 TSPY10P0CW01 314 aa19.16■□□□□ 0.66
PRIM1-201ENST00000338193 ADGRL2O95490 1459 aa19.16■□□□□ 0.66
PRIM1-201ENST00000338193 ATP10AO60312 1499 aa19.15■□□□□ 0.66
PRIM1-201ENST00000338193 RRP7BPQ9NSQ0 103 aa19.13■□□□□ 0.65
PRIM1-201ENST00000338193 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
PRIM1-201ENST00000338193 A2MP01023 1474 aa19.12■□□□□ 0.65
PRIM1-201ENST00000338193 REREQ9P2R6 1566 aa19.1■□□□□ 0.65
PRIM1-201ENST00000338193 KIF15Q9NS87 1388 aa19.1■□□□□ 0.65
PRIM1-201ENST00000338193 ANKRD30AQ9BXX3 1397 aa19.07■□□□□ 0.64
PRIM1-201ENST00000338193 DUOX2Q9NRD8 1548 aa19.06■□□□□ 0.64
PRIM1-201ENST00000338193 ROCK1Q13464 1354 aa19.06■□□□□ 0.64
PRIM1-201ENST00000338193 DHX29Q7Z478 1369 aaKnown RBP19.06■□□□□ 0.64
PRIM1-201ENST00000338193 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
PRIM1-201ENST00000338193 AGLP35573 1532 aa19.03■□□□□ 0.64
PRIM1-201ENST00000338193 NAIPQ13075 1403 aa19.03■□□□□ 0.64
PRIM1-201ENST00000338193 BCORL1Q5H9F3 1711 aa19.03■□□□□ 0.64
PRIM1-201ENST00000338193 MROH1Q8NDA8 1641 aa19.02■□□□□ 0.64
PRIM1-201ENST00000338193 MLECQ14165 292 aa19.01■□□□□ 0.63
PRIM1-201ENST00000338193 ARID4BQ4LE39 1312 aaPredicted RBP19.01■□□□□ 0.63
PRIM1-201ENST00000338193 EIF2AK4Q9P2K8 1649 aaKnown RBP19■□□□□ 0.63
PRIM1-201ENST00000338193 HFM1A2PYH4 1435 aa18.99■□□□□ 0.63
PRIM1-201ENST00000338193 ERBINQ96RT1 1412 aa18.99■□□□□ 0.63
PRIM1-201ENST00000338193 ANKRD50Q9ULJ7 1429 aa18.99■□□□□ 0.63
PRIM1-201ENST00000338193 TRIM26Q12899 539 aaPredicted RBP18.99■□□□□ 0.63
PRIM1-201ENST00000338193 RNF17Q9BXT8 1623 aaKnown RBP18.98■□□□□ 0.63
PRIM1-201ENST00000338193 KIF3BO15066 747 aa18.98■□□□□ 0.63
PRIM1-201ENST00000338193 ADAMTSL3P82987 1691 aa18.97■□□□□ 0.63
PRIM1-201ENST00000338193 DEPDC5O75140 1603 aa18.97■□□□□ 0.63
PRIM1-201ENST00000338193 MADDQ8WXG6 1647 aa18.96■□□□□ 0.63
PRIM1-201ENST00000338193 GGT6Q6P531 493 aa18.93■□□□□ 0.62
PRIM1-201ENST00000338193 UNC13BO14795 1591 aa18.93■□□□□ 0.62
PRIM1-201ENST00000338193 FER1L4A9Z1Z3 1794 aa18.93■□□□□ 0.62
PRIM1-201ENST00000338193 KDM4FA0A1W2PPD8 638 aa18.93■□□□□ 0.62
PRIM1-201ENST00000338193 CEP152O94986 1710 aa18.92■□□□□ 0.62
PRIM1-201ENST00000338193 PRDM15P57071 1507 aaPredicted RBP18.92■□□□□ 0.62
PRIM1-201ENST00000338193 CLTCQ00610 1675 aaKnown RBP18.92■□□□□ 0.62
PRIM1-201ENST00000338193 RIMS1Q86UR5 1692 aaKnown RBP18.91■□□□□ 0.62
PRIM1-201ENST00000338193 SETD5Q9C0A6 1442 aa18.9■□□□□ 0.62
PRIM1-201ENST00000338193 RAB3GAP2Q9H2M9 1393 aa18.89■□□□□ 0.61
PRIM1-201ENST00000338193 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.61
PRIM1-201ENST00000338193 ABCC3O15438 1527 aa18.87■□□□□ 0.61
PRIM1-201ENST00000338193 PCGF6Q9BYE7 350 aa18.86■□□□□ 0.61
PRIM1-201ENST00000338193 KDM5DQ9BY66 1539 aa18.85■□□□□ 0.61
PRIM1-201ENST00000338193 IQGAP3Q86VI3 1631 aa18.84■□□□□ 0.61
PRIM1-201ENST00000338193 C3P01024 1663 aa18.83■□□□□ 0.61
PRIM1-201ENST00000338193 CAMSAP1Q5T5Y3 1602 aa18.83■□□□□ 0.6
PRIM1-201ENST00000338193 PZPP20742 1482 aa18.82■□□□□ 0.6
PRIM1-201ENST00000338193 ZC3H13Q5T200 1668 aaKnown RBP18.82■□□□□ 0.6
PRIM1-201ENST00000338193 MROH2AA6NES4 1674 aa18.81■□□□□ 0.6
PRIM1-201ENST00000338193 FAM135AQ9P2D6 1515 aa18.81■□□□□ 0.6
PRIM1-201ENST00000338193 CEBPAP49715 358 aaPredicted RBP18.81■□□□□ 0.6
PRIM1-201ENST00000338193 NUP155O75694 1391 aa18.8■□□□□ 0.6
PRIM1-201ENST00000338193 PTPRMP28827 1452 aa18.8■□□□□ 0.6
PRIM1-201ENST00000338193 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
PRIM1-201ENST00000338193 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
PRIM1-201ENST00000338193 E9PCH4 1651 aa18.78■□□□□ 0.6
PRIM1-201ENST00000338193 TET3O43151 1660 aa18.78■□□□□ 0.6
PRIM1-201ENST00000338193 TRIM52Q96A61 297 aa18.78■□□□□ 0.6
PRIM1-201ENST00000338193 EFCAB6Q5THR3 1501 aa18.78■□□□□ 0.6
PRIM1-201ENST00000338193 ZMYM3Q14202 1370 aa18.76■□□□□ 0.59
PRIM1-201ENST00000338193 CFAP65Q6ZU64 1925 aaKnown RBP18.76■□□□□ 0.59
PRIM1-201ENST00000338193 KANK1Q14678 1352 aa18.75■□□□□ 0.59
PRIM1-201ENST00000338193 NPATQ14207 1427 aa18.75■□□□□ 0.59
PRIM1-201ENST00000338193 CNTLNQ9NXG0 1405 aa18.75■□□□□ 0.59
PRIM1-201ENST00000338193 SLC4A2P04920 1241 aa18.74■□□□□ 0.59
PRIM1-201ENST00000338193 FBXO31Q5XUX0 539 aaPredicted RBP18.74■□□□□ 0.59
PRIM1-201ENST00000338193 PREX1Q8TCU6 1659 aa18.72■□□□□ 0.59
PRIM1-201ENST00000338193 ESF1Q9H501 851 aaKnown RBP18.71■□□□□ 0.59
PRIM1-201ENST00000338193 ZNF219Q9P2Y4 722 aaPredicted RBP18.71■□□□□ 0.59
PRIM1-201ENST00000338193 ARHGAP31Q2M1Z3 1444 aa18.69■□□□□ 0.58
PRIM1-201ENST00000338193 ABCB7O75027 752 aa18.68■□□□□ 0.58
PRIM1-201ENST00000338193 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
PRIM1-201ENST00000338193 ERVK-7P63135 1459 aa18.68■□□□□ 0.58
PRIM1-201ENST00000338193 SYNMO15061 1565 aa18.68■□□□□ 0.58
PRIM1-201ENST00000338193 SPATA31D1Q6ZQQ2 1576 aa18.68■□□□□ 0.58
PRIM1-201ENST00000338193 HRCP23327 699 aa18.68■□□□□ 0.58
PRIM1-201ENST00000338193 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
PRIM1-201ENST00000338193 UGGT1Q9NYU2 1555 aa18.67■□□□□ 0.58
PRIM1-201ENST00000338193 PKD2Q13563 968 aa18.67■□□□□ 0.58
PRIM1-201ENST00000338193 PLA2R1Q13018 1463 aa18.65■□□□□ 0.58
PRIM1-201ENST00000338193 SPHKAPQ2M3C7 1700 aa18.65■□□□□ 0.58
PRIM1-201ENST00000338193 NOS1P29475 1434 aa18.64■□□□□ 0.57
PRIM1-201ENST00000338193 MYO3AQ8NEV4 1616 aa18.63■□□□□ 0.57
PRIM1-201ENST00000338193 RPRD2Q5VT52 1461 aaKnown RBP18.63■□□□□ 0.57
PRIM1-201ENST00000338193 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
PRIM1-201ENST00000338193 TNRQ92752 1358 aa18.61■□□□□ 0.57
PRIM1-201ENST00000338193 PTPRTO14522 1441 aa18.59■□□□□ 0.57
PRIM1-201ENST00000338193 PIK3C2BO00750 1634 aa18.59■□□□□ 0.57
PRIM1-201ENST00000338193 CLTCL1P53675 1640 aa18.59■□□□□ 0.57
PRIM1-201ENST00000338193 TRPM2O94759 1503 aa18.58■□□□□ 0.56
PRIM1-201ENST00000338193 MYO5BQ9ULV0 1848 aa18.55■□□□□ 0.56
PRIM1-201ENST00000338193 ZNF142P52746 1687 aaPredicted RBP18.55■□□□□ 0.56
PRIM1-201ENST00000338193 CEP170BQ9Y4F5 1589 aaPredicted RBP18.54■□□□□ 0.56
PRIM1-201ENST00000338193 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
PRIM1-201ENST00000338193 IDI1Q13907 227 aa18.54■□□□□ 0.56
PRIM1-201ENST00000338193 ANKRD30BQ9BXX2 1392 aa18.53■□□□□ 0.56
PRIM1-201ENST00000338193 UBR1Q8IWV7 1749 aa18.53■□□□□ 0.56
PRIM1-201ENST00000338193 SETD1BQ9UPS6 1966 aaKnown RBP18.52■□□□□ 0.56
PRIM1-201ENST00000338193 ACIN1Q9UKV3 1341 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms