RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 PES1O00541 588 aaKnown RBP7.58□□□□□ -1.2
CSMD1-201ENST00000335551 IFFO2Q5TF58 517 aa7.58□□□□□ -1.2
CSMD1-201ENST00000335551 NEFHP12036 1026 aa7.58□□□□□ -1.2
CSMD1-201ENST00000335551 RALBP1Q15311 655 aa7.58□□□□□ -1.2
CSMD1-201ENST00000335551 NEXNQ0ZGT2 675 aa7.57□□□□□ -1.2
CSMD1-201ENST00000335551 CCP110O43303 1012 aa7.57□□□□□ -1.2
CSMD1-201ENST00000335551 GOLGA6L7A0A1B0GV03 622 aa7.57□□□□□ -1.2
CSMD1-201ENST00000335551 SENP3-EIF4A1A0A087X0R7 540 aa7.57□□□□□ -1.2
CSMD1-201ENST00000335551 ERCC6Q03468 1493 aa7.57□□□□□ -1.2
CSMD1-201ENST00000335551 BAZ1BQ9UIG0 1483 aaKnown RBP7.57□□□□□ -1.2
CSMD1-201ENST00000335551 TRIM6-TRIM34B2RNG4 842 aa7.57□□□□□ -1.2
CSMD1-201ENST00000335551 RRP9O43818 475 aaKnown RBP7.56□□□□□ -1.2
CSMD1-201ENST00000335551 DYDC1Q8WWB3 177 aa7.56□□□□□ -1.2
CSMD1-201ENST00000335551 DEF6Q9H4E7 631 aa7.56□□□□□ -1.2
CSMD1-201ENST00000335551 PLEKHD1A6NEE1 506 aa7.56□□□□□ -1.2
CSMD1-201ENST00000335551 CAGE1Q8TC20 777 aa7.56□□□□□ -1.2
CSMD1-201ENST00000335551 EIF3AQ14152 1382 aaKnown RBP7.56□□□□□ -1.2
CSMD1-201ENST00000335551 TSPYL1Q9H0U9 437 aa7.56□□□□□ -1.2
CSMD1-201ENST00000335551 TMX4Q9H1E5 349 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-201ENST00000335551 HSP90AB3PQ58FF7 597 aa7.56□□□□□ -1.2
CSMD1-201ENST00000335551 RTF1Q92541 710 aaKnown RBP7.55□□□□□ -1.2
CSMD1-201ENST00000335551 IFT57Q9NWB7 429 aa7.55□□□□□ -1.2
CSMD1-201ENST00000335551 FAM161AQ3B820 660 aa7.55□□□□□ -1.2
CSMD1-201ENST00000335551 KIAA0754O94854 1291 aa7.55□□□□□ -1.2
CSMD1-201ENST00000335551 PDE3BQ13370 1112 aa7.55□□□□□ -1.2
CSMD1-201ENST00000335551 APBB1O00213 710 aa7.55□□□□□ -1.2
CSMD1-201ENST00000335551 CEP164Q9UPV0 1460 aa7.54□□□□□ -1.2
CSMD1-201ENST00000335551 CENPQQ7L2Z9 268 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-201ENST00000335551 NAT10Q9H0A0 1025 aaKnown RBP7.54□□□□□ -1.2
CSMD1-201ENST00000335551 NASPP49321 788 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-201ENST00000335551 POGKQ9P215 609 aa7.54□□□□□ -1.2
CSMD1-201ENST00000335551 KIF27Q86VH2 1401 aa7.54□□□□□ -1.2
CSMD1-201ENST00000335551 DHX8Q14562 1220 aaKnown RBP7.53□□□□□ -1.2
CSMD1-201ENST00000335551 MORC1Q86VD1 984 aa7.53□□□□□ -1.2
CSMD1-201ENST00000335551 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.53□□□□□ -1.2
CSMD1-201ENST00000335551 CCDC173Q0VFZ6 552 aa7.53□□□□□ -1.2
CSMD1-201ENST00000335551 ROCK2O75116 1388 aaKnown RBP7.53□□□□□ -1.2
CSMD1-201ENST00000335551 PRKCSHP14314 528 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-201ENST00000335551 KANK1Q14678 1352 aa7.52□□□□□ -1.2
CSMD1-201ENST00000335551 RGL3Q3MIN7 710 aa7.52□□□□□ -1.21
CSMD1-201ENST00000335551 SPAG9O60271 1321 aaKnown RBP7.52□□□□□ -1.21
CSMD1-201ENST00000335551 REC8O95072 547 aa7.52□□□□□ -1.21
CSMD1-201ENST00000335551 MRE11P49959 708 aa7.52□□□□□ -1.21
CSMD1-201ENST00000335551 CGNL1Q0VF96 1302 aa7.52□□□□□ -1.21
CSMD1-201ENST00000335551 GOLGA6L10A6NI86 522 aa7.52□□□□□ -1.21
CSMD1-201ENST00000335551 STK31Q9BXU1 1019 aa7.52□□□□□ -1.21
CSMD1-201ENST00000335551 FOXD4L1Q9NU39 408 aa7.52□□□□□ -1.21
CSMD1-201ENST00000335551 CENPJQ9HC77 1338 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-201ENST00000335551 FHAD1B1AJZ9 1412 aa7.51□□□□□ -1.21
CSMD1-201ENST00000335551 FAM184AQ8NB25 1140 aa7.51□□□□□ -1.21
CSMD1-201ENST00000335551 GORABQ5T7V8 394 aa7.51□□□□□ -1.21
CSMD1-201ENST00000335551 CCDC47Q96A33 483 aaKnown RBP7.51□□□□□ -1.21
CSMD1-201ENST00000335551 PCMTD1Q96MG8 357 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-201ENST00000335551 MYO15BQ96JP2 1530 aa7.51□□□□□ -1.21
CSMD1-201ENST00000335551 CCNB3Q8WWL7 1395 aa7.51□□□□□ -1.21
CSMD1-201ENST00000335551 AKAP17AQ02040 695 aaKnown RBP7.51□□□□□ -1.21
CSMD1-201ENST00000335551 MARCH6O60337 910 aa7.5□□□□□ -1.21
CSMD1-201ENST00000335551 NOL8Q76FK4 1167 aaKnown RBP7.5□□□□□ -1.21
CSMD1-201ENST00000335551 PLEKHG5O94827 1062 aa7.5□□□□□ -1.21
CSMD1-201ENST00000335551 NUCB2P80303 420 aa7.5□□□□□ -1.21
CSMD1-201ENST00000335551 PLCD4Q9BRC7 762 aa7.5□□□□□ -1.21
CSMD1-201ENST00000335551 CAVIN1Q6NZI2 390 aaKnown RBP7.5□□□□□ -1.21
CSMD1-201ENST00000335551 MEX3CQ5U5Q3 659 aaKnown RBP7.5□□□□□ -1.21
CSMD1-201ENST00000335551 FOXD4L5Q5VV16 416 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-201ENST00000335551 FOXD4L4Q8WXT5 416 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-201ENST00000335551 SMC4Q9NTJ3 1288 aa7.5□□□□□ -1.21
CSMD1-201ENST00000335551 EIF3JO75822 258 aaKnown RBP7.49□□□□□ -1.21
CSMD1-201ENST00000335551 LRRFIP1Q32MZ4 808 aaKnown RBP7.49□□□□□ -1.21
CSMD1-201ENST00000335551 VPS53Q5VIR6 699 aa7.49□□□□□ -1.21
CSMD1-201ENST00000335551 KIF7Q2M1P5 1343 aa7.49□□□□□ -1.21
CSMD1-201ENST00000335551 NAP1L1P55209 391 aaKnown RBP7.49□□□□□ -1.21
CSMD1-201ENST00000335551 MCTP1Q6DN14 999 aa7.49□□□□□ -1.21
CSMD1-201ENST00000335551 BAZ1AQ9NRL2 1556 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-201ENST00000335551 PDE4AP27815 886 aa7.49□□□□□ -1.21
CSMD1-201ENST00000335551 CHMP5Q9NZZ3 219 aa7.49□□□□□ -1.21
CSMD1-201ENST00000335551 ERLIN2O94905 339 aa7.49□□□□□ -1.21
CSMD1-201ENST00000335551 LMOD3Q0VAK6 560 aa7.49□□□□□ -1.21
CSMD1-201ENST00000335551 SASS6Q6UVJ0 657 aa7.49□□□□□ -1.21
CSMD1-201ENST00000335551 LETM1O95202 739 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-201ENST00000335551 R3HCC1Q9Y3T6 440 aaKnown RBP7.48□□□□□ -1.21
CSMD1-201ENST00000335551 ARHGAP35Q9NRY4 1499 aa7.48□□□□□ -1.21
CSMD1-201ENST00000335551 CT47B1P0C2W7 299 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-201ENST00000335551 AXDND1Q5T1B0 1012 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-201ENST00000335551 CT47A1Q5JQC4 288 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-201ENST00000335551 GIMAP7Q8NHV1 300 aa7.48□□□□□ -1.21
CSMD1-201ENST00000335551 KCNH8Q96L42 1107 aa7.48□□□□□ -1.21
CSMD1-201ENST00000335551 HDGFP51858 240 aaKnown RBP7.48□□□□□ -1.21
CSMD1-201ENST00000335551 SETD5Q9C0A6 1442 aa7.48□□□□□ -1.21
CSMD1-201ENST00000335551 IQCEQ6IPM2 695 aa7.48□□□□□ -1.21
CSMD1-201ENST00000335551 CCDC73Q6ZRK6 1079 aa7.48□□□□□ -1.21
CSMD1-201ENST00000335551 TCEAL9Q9UHQ7 104 aa7.47□□□□□ -1.21
CSMD1-201ENST00000335551 TNIKQ9UKE5 1360 aa7.47□□□□□ -1.21
CSMD1-201ENST00000335551 ANKRD18AQ8IVF6 992 aa7.47□□□□□ -1.21
CSMD1-201ENST00000335551 EZRP15311 586 aaKnown RBP7.47□□□□□ -1.21
CSMD1-201ENST00000335551 TRIM29Q14134 588 aa7.47□□□□□ -1.21
CSMD1-201ENST00000335551 ODF2Q5BJF6 829 aa7.47□□□□□ -1.21
CSMD1-201ENST00000335551 CPLX2Q6PUV4 134 aaKnown RBP7.47□□□□□ -1.21
CSMD1-201ENST00000335551 RUFY2Q8WXA3 655 aa7.47□□□□□ -1.21
CSMD1-201ENST00000335551 BICD2Q8TD16 824 aa7.47□□□□□ -1.21
CSMD1-201ENST00000335551 ZKSCAN1P17029 563 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms