RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 SPRYD3Q8NCJ5 442 aa20.6■□□□□ 0.89
PDZD8-201ENST00000334464 TPM2P07951 284 aa20.59■□□□□ 0.89
PDZD8-201ENST00000334464 STK26Q9P289 416 aa20.59■□□□□ 0.89
PDZD8-201ENST00000334464 MLECQ14165 292 aa20.59■□□□□ 0.89
PDZD8-201ENST00000334464 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.57■□□□□ 0.88
PDZD8-201ENST00000334464 SETQ01105 290 aaPredicted RBP20.57■□□□□ 0.88
PDZD8-201ENST00000334464 PRM3Q9NNZ6 103 aa20.57■□□□□ 0.88
PDZD8-201ENST00000334464 GGT6Q6P531 493 aa20.57■□□□□ 0.88
PDZD8-201ENST00000334464 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
PDZD8-201ENST00000334464 ZNF330Q9Y3S2 320 aaPredicted RBP20.56■□□□□ 0.88
PDZD8-201ENST00000334464 RAB3GAP2Q9H2M9 1393 aa20.55■□□□□ 0.88
PDZD8-201ENST00000334464 ROCK1Q13464 1354 aa20.55■□□□□ 0.88
PDZD8-201ENST00000334464 SKOR2Q2VWA4 1001 aaPredicted RBP20.54■□□□□ 0.88
PDZD8-201ENST00000334464 GPS2Q13227 327 aa20.53■□□□□ 0.88
PDZD8-201ENST00000334464 CCDC144AA2RUR9 1427 aa20.53■□□□□ 0.88
PDZD8-201ENST00000334464 RBM19Q9Y4C8 960 aaKnown RBP20.53■□□□□ 0.88
PDZD8-201ENST00000334464 SOGA1O94964 1423 aa20.52■□□□□ 0.88
PDZD8-201ENST00000334464 SLKQ9H2G2 1235 aaPredicted RBP20.52■□□□□ 0.88
PDZD8-201ENST00000334464 NGEFQ8N5V2 710 aa20.52■□□□□ 0.88
PDZD8-201ENST00000334464 SF3A1Q15459 793 aaKnown RBP20.52■□□□□ 0.88
PDZD8-201ENST00000334464 MPHOSPH9Q99550 1183 aa20.52■□□□□ 0.88
PDZD8-201ENST00000334464 ANO8Q9HCE9 1232 aaPredicted RBP20.52■□□□□ 0.88
PDZD8-201ENST00000334464 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
PDZD8-201ENST00000334464 AMOTL1Q8IY63 956 aa20.51■□□□□ 0.87
PDZD8-201ENST00000334464 AKAP17AQ02040 695 aaKnown RBP20.51■□□□□ 0.87
PDZD8-201ENST00000334464 MFAP1P55081 439 aaKnown RBP20.5■□□□□ 0.87
PDZD8-201ENST00000334464 HOOK1Q9UJC3 728 aaKnown RBP20.5■□□□□ 0.87
PDZD8-201ENST00000334464 MARCH6O60337 910 aa20.5■□□□□ 0.87
PDZD8-201ENST00000334464 H3BQV1 296 aa20.5■□□□□ 0.87
PDZD8-201ENST00000334464 IFFO2Q5TF58 517 aa20.5■□□□□ 0.87
PDZD8-201ENST00000334464 IPO9Q96P70 1041 aaKnown RBP20.5■□□□□ 0.87
PDZD8-201ENST00000334464 AMPHP49418 695 aa20.49■□□□□ 0.87
PDZD8-201ENST00000334464 TPD52L1Q16890 204 aaPredicted RBP20.49■□□□□ 0.87
PDZD8-201ENST00000334464 WIZO95785 1651 aa20.49■□□□□ 0.87
PDZD8-201ENST00000334464 CCDC88BA6NC98 1476 aa20.48■□□□□ 0.87
PDZD8-201ENST00000334464 NGDNQ8NEJ9 315 aaKnown RBP20.48■□□□□ 0.87
PDZD8-201ENST00000334464 GZF1Q9H116 711 aaPredicted RBP20.48■□□□□ 0.87
PDZD8-201ENST00000334464 GOLGA6L19H0YKK7 550 aa20.48■□□□□ 0.87
PDZD8-201ENST00000334464 RAPGEF2Q9Y4G8 1499 aa20.48■□□□□ 0.87
PDZD8-201ENST00000334464 FRAT2O75474 233 aaPredicted RBP20.48■□□□□ 0.87
PDZD8-201ENST00000334464 ANKRD20A12PQ8NF67 263 aa20.48■□□□□ 0.87
PDZD8-201ENST00000334464 TCEAL9Q9UHQ7 104 aa20.48■□□□□ 0.87
PDZD8-201ENST00000334464 CUX1P39880 1505 aa20.48■□□□□ 0.87
PDZD8-201ENST00000334464 GTF2E1P29083 439 aaPredicted RBP20.48■□□□□ 0.87
PDZD8-201ENST00000334464 CPLX2Q6PUV4 134 aaKnown RBP20.47■□□□□ 0.87
PDZD8-201ENST00000334464 RUFY2Q8WXA3 655 aa20.46■□□□□ 0.87
PDZD8-201ENST00000334464 IPO7O95373 1038 aaKnown RBP20.46■□□□□ 0.87
PDZD8-201ENST00000334464 NOL10Q9BSC4 688 aaKnown RBP20.46■□□□□ 0.87
PDZD8-201ENST00000334464 REC8O95072 547 aa20.45■□□□□ 0.86
PDZD8-201ENST00000334464 VPS53Q5VIR6 699 aa20.45■□□□□ 0.86
PDZD8-201ENST00000334464 CENPQQ7L2Z9 268 aaPredicted RBP20.45■□□□□ 0.86
PDZD8-201ENST00000334464 SYNE3Q6ZMZ3 975 aa20.44■□□□□ 0.86
PDZD8-201ENST00000334464 WASHC2CQ9Y4E1 1318 aa20.44■□□□□ 0.86
PDZD8-201ENST00000334464 MYBBP1AQ9BQG0 1328 aaKnown RBP20.44■□□□□ 0.86
PDZD8-201ENST00000334464 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
PDZD8-201ENST00000334464 NEXNQ0ZGT2 675 aa20.43■□□□□ 0.86
PDZD8-201ENST00000334464 SLC4A10Q6U841 1118 aa20.42■□□□□ 0.86
PDZD8-201ENST00000334464 FAM184AQ8NB25 1140 aa20.41■□□□□ 0.86
PDZD8-201ENST00000334464 CCDC47Q96A33 483 aaKnown RBP20.41■□□□□ 0.86
PDZD8-201ENST00000334464 C1orf141Q5JVX7 400 aa20.41■□□□□ 0.86
PDZD8-201ENST00000334464 TOMM22Q9NS69 142 aa20.41■□□□□ 0.86
PDZD8-201ENST00000334464 EVC2Q86UK5 1308 aa20.41■□□□□ 0.86
PDZD8-201ENST00000334464 CCDC9Q9Y3X0 531 aaKnown RBP20.4■□□□□ 0.86
PDZD8-201ENST00000334464 BECN2A8MW95 431 aa20.39■□□□□ 0.85
PDZD8-201ENST00000334464 TRIM34Q9BYJ4 488 aa20.39■□□□□ 0.85
PDZD8-201ENST00000334464 E9PSI1 815 aa20.38■□□□□ 0.85
PDZD8-201ENST00000334464 AAMPQ13685 434 aa20.38■□□□□ 0.85
PDZD8-201ENST00000334464 ZKSCAN1P17029 563 aaPredicted RBP20.38■□□□□ 0.85
PDZD8-201ENST00000334464 CREBRFQ8IUR6 639 aa20.38■□□□□ 0.85
PDZD8-201ENST00000334464 DIAPH3Q9NSV4 1193 aa20.38■□□□□ 0.85
PDZD8-201ENST00000334464 PES1O00541 588 aaKnown RBP20.38■□□□□ 0.85
PDZD8-201ENST00000334464 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
PDZD8-201ENST00000334464 TRIM29Q14134 588 aa20.37■□□□□ 0.85
PDZD8-201ENST00000334464 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
PDZD8-201ENST00000334464 KIF3BO15066 747 aa20.36■□□□□ 0.85
PDZD8-201ENST00000334464 RNF20Q5VTR2 975 aa20.35■□□□□ 0.85
PDZD8-201ENST00000334464 COG3Q96JB2 828 aa20.35■□□□□ 0.85
PDZD8-201ENST00000334464 CECR2Q9BXF3 1484 aa20.34■□□□□ 0.85
PDZD8-201ENST00000334464 FAM161AQ3B820 660 aa20.33■□□□□ 0.85
PDZD8-201ENST00000334464 ZKSCAN2Q63HK3 967 aa20.33■□□□□ 0.84
PDZD8-201ENST00000334464 TTC5Q8N0Z6 440 aa20.33■□□□□ 0.84
PDZD8-201ENST00000334464 VGFO15240 615 aaPredicted RBP20.32■□□□□ 0.84
PDZD8-201ENST00000334464 MIA2Q96PC5 1412 aa20.32■□□□□ 0.84
PDZD8-201ENST00000334464 MROH2BQ7Z745 1585 aa20.32■□□□□ 0.84
PDZD8-201ENST00000334464 WASHC2AQ641Q2 1341 aa20.32■□□□□ 0.84
PDZD8-201ENST00000334464 ZBED9Q6R2W3 1325 aa20.31■□□□□ 0.84
PDZD8-201ENST00000334464 HSP90AA2PQ14568 343 aaPredicted RBP20.31■□□□□ 0.84
PDZD8-201ENST00000334464 TEX35Q5T0J7 233 aa20.31■□□□□ 0.84
PDZD8-201ENST00000334464 CTDP1Q9Y5B0 961 aaPredicted RBP20.31■□□□□ 0.84
PDZD8-201ENST00000334464 DDX58O95786 925 aaKnown RBP20.3■□□□□ 0.84
PDZD8-201ENST00000334464 CDR1P51861 262 aa20.3■□□□□ 0.84
PDZD8-201ENST00000334464 DDX19BQ9UMR2 479 aa20.3■□□□□ 0.84
PDZD8-201ENST00000334464 FOXD1Q16676 465 aa20.3■□□□□ 0.84
PDZD8-201ENST00000334464 TEFQ10587 303 aa20.29■□□□□ 0.84
PDZD8-201ENST00000334464 C9orf78Q9NZ63 289 aaPredicted RBP20.29■□□□□ 0.84
PDZD8-201ENST00000334464 TRDNQ13061 729 aa20.29■□□□□ 0.84
PDZD8-201ENST00000334464 ARID3AQ99856 593 aa20.28■□□□□ 0.84
PDZD8-201ENST00000334464 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.28■□□□□ 0.84
PDZD8-201ENST00000334464 RDXP35241 583 aaKnown RBP20.28■□□□□ 0.84
PDZD8-201ENST00000334464 CPLX1O14810 134 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms