RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 TPM2P07951 284 aa7.81□□□□□ -1.16
SSH1-202ENST00000326495 MYO6Q9UM54 1294 aa7.8□□□□□ -1.16
SSH1-202ENST00000326495 IPO7O95373 1038 aaKnown RBP7.8□□□□□ -1.16
SSH1-202ENST00000326495 MORC1Q86VD1 984 aa7.8□□□□□ -1.16
SSH1-202ENST00000326495 ANKRD20A12PQ8NF67 263 aa7.8□□□□□ -1.16
SSH1-202ENST00000326495 RAB3GAP2Q9H2M9 1393 aa7.8□□□□□ -1.16
SSH1-202ENST00000326495 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.8□□□□□ -1.16
SSH1-202ENST00000326495 RTF1Q92541 710 aaKnown RBP7.8□□□□□ -1.16
SSH1-202ENST00000326495 U2SURPO15042 1029 aaKnown RBP7.8□□□□□ -1.16
SSH1-202ENST00000326495 KCNH8Q96L42 1107 aa7.8□□□□□ -1.16
SSH1-202ENST00000326495 GSE1Q14687 1217 aa7.8□□□□□ -1.16
SSH1-202ENST00000326495 APPP05067 770 aa7.8□□□□□ -1.16
SSH1-202ENST00000326495 SLKQ9H2G2 1235 aaPredicted RBP7.8□□□□□ -1.16
SSH1-202ENST00000326495 NLRP13Q86W25 1043 aa7.79□□□□□ -1.16
SSH1-202ENST00000326495 TMX4Q9H1E5 349 aaPredicted RBP7.79□□□□□ -1.16
SSH1-202ENST00000326495 CCP110O43303 1012 aa7.79□□□□□ -1.16
SSH1-202ENST00000326495 TAF3Q5VWG9 929 aa7.79□□□□□ -1.16
SSH1-202ENST00000326495 CPLX2Q6PUV4 134 aaKnown RBP7.79□□□□□ -1.16
SSH1-202ENST00000326495 DCAF11Q8TEB1 546 aa7.79□□□□□ -1.16
SSH1-202ENST00000326495 NINLQ9Y2I6 1382 aa7.78□□□□□ -1.16
SSH1-202ENST00000326495 CGNL1Q0VF96 1302 aa7.78□□□□□ -1.16
SSH1-202ENST00000326495 KIF7Q2M1P5 1343 aa7.78□□□□□ -1.16
SSH1-202ENST00000326495 PDS5BQ9NTI5 1447 aa7.78□□□□□ -1.16
SSH1-202ENST00000326495 SIN3AQ96ST3 1273 aa7.78□□□□□ -1.16
SSH1-202ENST00000326495 TXLNBQ8N3L3 684 aa7.78□□□□□ -1.16
SSH1-202ENST00000326495 GZF1Q9H116 711 aaPredicted RBP7.78□□□□□ -1.16
SSH1-202ENST00000326495 HDGFL2Q7Z4V5 671 aaPredicted RBP7.78□□□□□ -1.16
SSH1-202ENST00000326495 ITPRIPQ8IWB1 547 aa7.78□□□□□ -1.16
SSH1-202ENST00000326495 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.78□□□□□ -1.16
SSH1-202ENST00000326495 EIF3DO15371 548 aaKnown RBP eCLIP7.78□□□□□ -1.16
SSH1-202ENST00000326495 DCTN1Q14203 1278 aa7.78□□□□□ -1.16
SSH1-202ENST00000326495 TERF2IPQ9NYB0 399 aa7.78□□□□□ -1.16
SSH1-202ENST00000326495 CWC15Q9P013 229 aaKnown RBP7.78□□□□□ -1.16
SSH1-202ENST00000326495 CARMIL1Q5VZK9 1371 aa7.77□□□□□ -1.16
SSH1-202ENST00000326495 SPRYD3Q8NCJ5 442 aa7.77□□□□□ -1.16
SSH1-202ENST00000326495 FAM161AQ3B820 660 aa7.77□□□□□ -1.17
SSH1-202ENST00000326495 REC8O95072 547 aa7.77□□□□□ -1.17
SSH1-202ENST00000326495 HSPA5P11021 654 aaKnown RBP7.77□□□□□ -1.17
SSH1-202ENST00000326495 HMGN5P82970 282 aaKnown RBP7.77□□□□□ -1.17
SSH1-202ENST00000326495 ARGLU1Q9NWB6 273 aaPredicted RBP7.76□□□□□ -1.17
SSH1-202ENST00000326495 CENPJQ9HC77 1338 aaPredicted RBP7.76□□□□□ -1.17
SSH1-202ENST00000326495 NPHP1O15259 732 aa7.76□□□□□ -1.17
SSH1-202ENST00000326495 SMC4Q9NTJ3 1288 aa7.76□□□□□ -1.17
SSH1-202ENST00000326495 HSP90B1P14625 803 aaKnown RBP7.76□□□□□ -1.17
SSH1-202ENST00000326495 RUFY2Q8WXA3 655 aa7.76□□□□□ -1.17
SSH1-202ENST00000326495 GOLGA6L19H0YKK7 550 aa7.75□□□□□ -1.17
SSH1-202ENST00000326495 CCDC7Q96M83 1385 aa7.75□□□□□ -1.17
SSH1-202ENST00000326495 WASHC2AQ641Q2 1341 aa7.75□□□□□ -1.17
SSH1-202ENST00000326495 CCDC47Q96A33 483 aaKnown RBP7.75□□□□□ -1.17
SSH1-202ENST00000326495 ERCC4Q92889 916 aaPredicted RBP7.75□□□□□ -1.17
SSH1-202ENST00000326495 MCM2P49736 904 aa7.75□□□□□ -1.17
SSH1-202ENST00000326495 STK31Q9BXU1 1019 aa7.75□□□□□ -1.17
SSH1-202ENST00000326495 DIAPH3Q9NSV4 1193 aa7.74□□□□□ -1.17
SSH1-202ENST00000326495 CCDC66A2RUB6 948 aa7.74□□□□□ -1.17
SSH1-202ENST00000326495 WASHC2CQ9Y4E1 1318 aa7.74□□□□□ -1.17
SSH1-202ENST00000326495 LETM1O95202 739 aaPredicted RBP7.74□□□□□ -1.17
SSH1-202ENST00000326495 SMARCA4P51532 1647 aa7.74□□□□□ -1.17
SSH1-202ENST00000326495 MYBBP1AQ9BQG0 1328 aaKnown RBP7.74□□□□□ -1.17
SSH1-202ENST00000326495 MFAP1P55081 439 aaKnown RBP7.74□□□□□ -1.17
SSH1-202ENST00000326495 KIF21BO75037 1637 aa7.73□□□□□ -1.17
SSH1-202ENST00000326495 PODXL2Q9NZ53 605 aa7.73□□□□□ -1.17
SSH1-202ENST00000326495 SUPT6HQ7KZ85 1726 aaKnown RBP7.73□□□□□ -1.17
SSH1-202ENST00000326495 NAT10Q9H0A0 1025 aaKnown RBP7.73□□□□□ -1.17
SSH1-202ENST00000326495 SRPK2P78362 688 aaKnown RBP7.73□□□□□ -1.17
SSH1-202ENST00000326495 NUCB2P80303 420 aa7.73□□□□□ -1.17
SSH1-202ENST00000326495 MIA2Q96PC5 1412 aa7.72□□□□□ -1.17
SSH1-202ENST00000326495 TRIM6-TRIM34B2RNG4 842 aa7.72□□□□□ -1.17
SSH1-202ENST00000326495 ZRSR2Q15696 482 aaKnown RBP7.72□□□□□ -1.17
SSH1-202ENST00000326495 PRKCSHP14314 528 aaPredicted RBP7.72□□□□□ -1.17
SSH1-202ENST00000326495 PIP4K2AP48426 406 aaPredicted RBP7.72□□□□□ -1.17
SSH1-202ENST00000326495 RNF20Q5VTR2 975 aa7.72□□□□□ -1.17
SSH1-202ENST00000326495 SOGA1O94964 1423 aa7.72□□□□□ -1.17
SSH1-202ENST00000326495 CCDC88BA6NC98 1476 aa7.72□□□□□ -1.17
SSH1-202ENST00000326495 AK7Q96M32 723 aa7.71□□□□□ -1.17
SSH1-202ENST00000326495 PDCP20941 246 aa7.71□□□□□ -1.17
SSH1-202ENST00000326495 LUC7LQ9NQ29 371 aaKnown RBP7.71□□□□□ -1.17
SSH1-202ENST00000326495 MEX3CQ5U5Q3 659 aaKnown RBP7.71□□□□□ -1.18
SSH1-202ENST00000326495 USP8P40818 1118 aa7.71□□□□□ -1.18
SSH1-202ENST00000326495 CCDC173Q0VFZ6 552 aa7.71□□□□□ -1.18
SSH1-202ENST00000326495 ZNF771Q7L3S4 317 aaPredicted RBP7.71□□□□□ -1.18
SSH1-202ENST00000326495 U2AF1L5P0DN76 240 aaPredicted RBP7.71□□□□□ -1.18
SSH1-202ENST00000326495 U2AF1Q01081 240 aaKnown RBP eCLIP7.71□□□□□ -1.18
SSH1-202ENST00000326495 HSP90AB4PQ58FF6 505 aa7.71□□□□□ -1.18
SSH1-202ENST00000326495 FAM43AQ8N2R8 423 aa7.71□□□□□ -1.18
SSH1-202ENST00000326495 SENP3Q9H4L4 574 aaPredicted RBP7.71□□□□□ -1.18
SSH1-202ENST00000326495 CNTLNQ9NXG0 1405 aa7.71□□□□□ -1.18
SSH1-202ENST00000326495 CT47B1P0C2W7 299 aaPredicted RBP7.7□□□□□ -1.18
SSH1-202ENST00000326495 MPHOSPH9Q99550 1183 aa7.7□□□□□ -1.18
SSH1-202ENST00000326495 E9PSI1 815 aa7.7□□□□□ -1.18
SSH1-202ENST00000326495 CLSTN1O94985 981 aa7.7□□□□□ -1.18
SSH1-202ENST00000326495 H3BQV1 296 aa7.7□□□□□ -1.18
SSH1-202ENST00000326495 IFFO2Q5TF58 517 aa7.7□□□□□ -1.18
SSH1-202ENST00000326495 BECN2A8MW95 431 aa7.7□□□□□ -1.18
SSH1-202ENST00000326495 DDX49Q9Y6V7 483 aaKnown RBP7.7□□□□□ -1.18
SSH1-202ENST00000326495 HSP90B2PQ58FF3 399 aa7.7□□□□□ -1.18
SSH1-202ENST00000326495 CECR2Q9BXF3 1484 aa7.69□□□□□ -1.18
SSH1-202ENST00000326495 RRP1P56182 461 aaKnown RBP7.69□□□□□ -1.18
SSH1-202ENST00000326495 MROH2BQ7Z745 1585 aa7.69□□□□□ -1.18
SSH1-202ENST00000326495 PDE4AP27815 886 aa7.69□□□□□ -1.18
SSH1-202ENST00000326495 RRP12Q5JTH9 1297 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms