RNA–Protein interactions for RNA: ENST00000325674.11

CAST-202, Transcript of calpastatin, humanhuman

TSL 5 BASIC

Gene CAST, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-202ENST00000325674 HIRIP3Q9BW71 556 aaPredicted RBP9.04□□□□□ -0.96
CAST-202ENST00000325674 HFM1A2PYH4 1435 aa9.04□□□□□ -0.96
CAST-202ENST00000325674 ROCK2O75116 1388 aaKnown RBP9.04□□□□□ -0.96
CAST-202ENST00000325674 SHROOM2Q13796 1616 aa9.04□□□□□ -0.96
CAST-202ENST00000325674 MRS2Q9HD23 443 aa9.04□□□□□ -0.96
CAST-202ENST00000325674 ZSCAN30Q86W11 494 aa9.03□□□□□ -0.96
CAST-202ENST00000325674 TONSLQ96HA7 1378 aa9.03□□□□□ -0.96
CAST-202ENST00000325674 MYH16Q9H6N6 1097 aa9.02□□□□□ -0.97
CAST-202ENST00000325674 BCORL1Q5H9F3 1711 aa9.01□□□□□ -0.97
CAST-202ENST00000325674 CCDC18Q5T9S5 1454 aa9.01□□□□□ -0.97
CAST-202ENST00000325674 MIA2Q96PC5 1412 aa9.01□□□□□ -0.97
CAST-202ENST00000325674 YY1AP1Q9H869 796 aa9.01□□□□□ -0.97
CAST-202ENST00000325674 HSPA5P11021 654 aaKnown RBP9.01□□□□□ -0.97
CAST-202ENST00000325674 MCM4P33991 863 aa9.01□□□□□ -0.97
CAST-202ENST00000325674 GTF2F1P35269 517 aaKnown RBP eCLIP9.01□□□□□ -0.97
CAST-202ENST00000325674 PSEN1P49768 467 aa9.01□□□□□ -0.97
CAST-202ENST00000325674 THOC2Q8NI27 1593 aaKnown RBP9□□□□□ -0.97
CAST-202ENST00000325674 PLEKHH2Q8IVE3 1493 aa9□□□□□ -0.97
CAST-202ENST00000325674 PNISRQ8TF01 805 aaKnown RBP9□□□□□ -0.97
CAST-202ENST00000325674 RTEL1-TNFRSF6BF6WH68 1400 aa9□□□□□ -0.97
CAST-202ENST00000325674 FAM9BQ8IZU0 186 aa9□□□□□ -0.97
CAST-202ENST00000325674 CNKSR2Q8WXI2 1034 aa9□□□□□ -0.97
CAST-202ENST00000325674 DDIT3P35638 169 aa8.99□□□□□ -0.97
CAST-202ENST00000325674 CCDC173Q0VFZ6 552 aa8.99□□□□□ -0.97
CAST-202ENST00000325674 PDE3BQ13370 1112 aa8.99□□□□□ -0.97
CAST-202ENST00000325674 CENPQQ7L2Z9 268 aaPredicted RBP8.99□□□□□ -0.97
CAST-202ENST00000325674 ANP32BQ92688 251 aaKnown RBP8.99□□□□□ -0.97
CAST-202ENST00000325674 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.99□□□□□ -0.97
CAST-202ENST00000325674 TULP2O00295 520 aa8.98□□□□□ -0.97
CAST-202ENST00000325674 TEX14Q8IWB6 1497 aa8.98□□□□□ -0.97
CAST-202ENST00000325674 HOMEZQ8IX15 550 aa8.98□□□□□ -0.97
CAST-202ENST00000325674 BLMP54132 1417 aaPredicted RBP8.97□□□□□ -0.97
CAST-202ENST00000325674 PDLIM2Q96JY6 352 aa8.97□□□□□ -0.97
CAST-202ENST00000325674 RCAN3Q9UKA8 241 aa8.97□□□□□ -0.97
CAST-202ENST00000325674 NOL7Q9UMY1 257 aaKnown RBP8.97□□□□□ -0.97
CAST-202ENST00000325674 DHX37Q8IY37 1157 aaKnown RBP8.96□□□□□ -0.97
CAST-202ENST00000325674 ZNF692Q9BU19 519 aaPredicted RBP8.96□□□□□ -0.97
CAST-202ENST00000325674 CUX1P39880 1505 aa8.96□□□□□ -0.97
CAST-202ENST00000325674 MCM5P33992 734 aa8.96□□□□□ -0.97
CAST-202ENST00000325674 IRX5P78411 483 aaPredicted RBP8.96□□□□□ -0.97
CAST-202ENST00000325674 IRX3P78415 501 aaPredicted RBP8.96□□□□□ -0.97
CAST-202ENST00000325674 CLASP1Q7Z460 1538 aa8.96□□□□□ -0.97
CAST-202ENST00000325674 MBD5Q9P267 1494 aa8.96□□□□□ -0.98
CAST-202ENST00000325674 HSP90AB1P08238 724 aaKnown RBP8.96□□□□□ -0.98
CAST-202ENST00000325674 TNNT2P45379 298 aaPredicted RBP8.96□□□□□ -0.98
CAST-202ENST00000325674 CFAP65Q6ZU64 1925 aaKnown RBP8.96□□□□□ -0.98
CAST-202ENST00000325674 AQRO60306 1485 aaKnown RBP eCLIP8.95□□□□□ -0.983e-6■■■■□ 24.7
CAST-202ENST00000325674 BRD4O60885 1362 aaPredicted RBP8.95□□□□□ -0.98
CAST-202ENST00000325674 NINLQ9Y2I6 1382 aa8.95□□□□□ -0.98
CAST-202ENST00000325674 UQCRHLA0A096LP55 91 aa8.95□□□□□ -0.98
CAST-202ENST00000325674 UQCRHP07919 91 aa8.95□□□□□ -0.98
CAST-202ENST00000325674 KDM5CP41229 1560 aa8.95□□□□□ -0.98
CAST-202ENST00000325674 PRDM10Q9NQV6 1147 aa8.95□□□□□ -0.98
CAST-202ENST00000325674 FAM13BQ9NYF5 915 aa8.95□□□□□ -0.98
CAST-202ENST00000325674 TRAK2O60296 914 aa8.95□□□□□ -0.98
CAST-202ENST00000325674 SASS6Q6UVJ0 657 aa8.95□□□□□ -0.98
CAST-202ENST00000325674 ZNF710Q8N1W2 664 aa8.95□□□□□ -0.98
CAST-202ENST00000325674 DCAF8L2P0C7V8 631 aa8.94□□□□□ -0.98
CAST-202ENST00000325674 GEMIN8Q9NWZ8 242 aaKnown RBP8.94□□□□□ -0.98
CAST-202ENST00000325674 VGLL3A8MV65 326 aa8.94□□□□□ -0.98
CAST-202ENST00000325674 DNAJC2Q99543 621 aaKnown RBP8.94□□□□□ -0.98
CAST-202ENST00000325674 KIF7Q2M1P5 1343 aa8.94□□□□□ -0.98
CAST-202ENST00000325674 GAS2L3Q86XJ1 694 aa8.93□□□□□ -0.98
CAST-202ENST00000325674 EIF4G2P78344 907 aaKnown RBP eCLIP8.93□□□□□ -0.98
CAST-202ENST00000325674 BECN1Q14457 450 aa8.93□□□□□ -0.98
CAST-202ENST00000325674 UHRF1BP1LA0JNW5 1464 aa8.93□□□□□ -0.98
CAST-202ENST00000325674 SOX12O15370 315 aa8.93□□□□□ -0.98
CAST-202ENST00000325674 NAIPQ13075 1403 aa8.93□□□□□ -0.98
CAST-202ENST00000325674 CSPP1Q1MSJ5 1256 aa8.93□□□□□ -0.98
CAST-202ENST00000325674 PLCD3Q8N3E9 789 aa8.92□□□□□ -0.98
CAST-202ENST00000325674 DDX11L8A8MPP1 907 aa8.92□□□□□ -0.98
CAST-202ENST00000325674 RBM25P49756 843 aaKnown RBP8.92□□□□□ -0.98
CAST-202ENST00000325674 MYRIPQ8NFW9 859 aa8.92□□□□□ -0.98
CAST-202ENST00000325674 TRIM44Q96DX7 344 aaPredicted RBP8.92□□□□□ -0.98
CAST-202ENST00000325674 SLC52A1Q9NWF4 448 aa8.92□□□□□ -0.98
CAST-202ENST00000325674 EIF3AQ14152 1382 aaKnown RBP8.92□□□□□ -0.98
CAST-202ENST00000325674 GAPVD1Q14C86 1478 aa8.92□□□□□ -0.98
CAST-202ENST00000325674 YEATS2Q9ULM3 1422 aa8.92□□□□□ -0.98
CAST-202ENST00000325674 KIF14Q15058 1648 aa8.92□□□□□ -0.98
CAST-202ENST00000325674 CLEC17AQ6ZS10 378 aa8.91□□□□□ -0.98
CAST-202ENST00000325674 KCNG1Q9UIX4 513 aa8.91□□□□□ -0.98
CAST-202ENST00000325674 ZNF608Q9ULD9 1512 aaPredicted RBP8.91□□□□□ -0.98
CAST-202ENST00000325674 RAD50Q92878 1312 aa8.91□□□□□ -0.98
CAST-202ENST00000325674 CLGNO14967 610 aa8.9□□□□□ -0.98
CAST-202ENST00000325674 AXDND1Q5T1B0 1012 aaPredicted RBP8.9□□□□□ -0.98
CAST-202ENST00000325674 SKAP1Q86WV1 359 aa8.9□□□□□ -0.98
CAST-202ENST00000325674 ATP2B3Q16720 1220 aa8.9□□□□□ -0.99
CAST-202ENST00000325674 GRIPAP1Q4V328 841 aa8.9□□□□□ -0.99
CAST-202ENST00000325674 TBC1D32Q96NH3 1257 aa8.9□□□□□ -0.99
CAST-202ENST00000325674 PCF11O94913 1555 aaKnown RBP8.9□□□□□ -0.99
CAST-202ENST00000325674 ATAD2BQ9ULI0 1458 aa8.9□□□□□ -0.99
CAST-202ENST00000325674 PLXNC1O60486 1568 aa8.89□□□□□ -0.99
CAST-202ENST00000325674 PTPRKQ15262 1439 aa8.89□□□□□ -0.99
CAST-202ENST00000325674 CRBNQ96SW2 442 aa8.89□□□□□ -0.99
CAST-202ENST00000325674 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
CAST-202ENST00000325674 R3HCC1Q9Y3T6 440 aaKnown RBP8.89□□□□□ -0.99
CAST-202ENST00000325674 RPRD2Q5VT52 1461 aaKnown RBP8.89□□□□□ -0.99
CAST-202ENST00000325674 HSP90B1P14625 803 aaKnown RBP8.89□□□□□ -0.99
CAST-202ENST00000325674 FAM193AP78312 1265 aa8.89□□□□□ -0.99
CAST-202ENST00000325674 GABPB1Q06547 395 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms