RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 NBPF1Q3BBV0 1214 aa22.11■■□□□ 1.13
SHISA2-201ENST00000319420 CCER2I3L3R5 266 aa22.11■■□□□ 1.13
SHISA2-201ENST00000319420 CCDC184Q52MB2 194 aa22.09■■□□□ 1.13
SHISA2-201ENST00000319420 RAPGEF3O95398 923 aa22.08■■□□□ 1.13
SHISA2-201ENST00000319420 DUOX2Q9NRD8 1548 aa22.08■■□□□ 1.13
SHISA2-201ENST00000319420 ROCK2O75116 1388 aaKnown RBP22.07■■□□□ 1.12
SHISA2-201ENST00000319420 PLA2R1Q13018 1463 aa22.07■■□□□ 1.12
SHISA2-201ENST00000319420 SENP3-EIF4A1A0A087X0R7 540 aa22.06■■□□□ 1.12
SHISA2-201ENST00000319420 GGT6Q6P531 493 aa22.06■■□□□ 1.12
SHISA2-201ENST00000319420 KDM5DQ9BY66 1539 aa22.06■■□□□ 1.12
SHISA2-201ENST00000319420 CD109Q6YHK3 1445 aa22.05■■□□□ 1.12
SHISA2-201ENST00000319420 SPATA31E1Q6ZUB1 1445 aa22.05■■□□□ 1.12
SHISA2-201ENST00000319420 MAST1Q9Y2H9 1570 aa22.04■■□□□ 1.12
SHISA2-201ENST00000319420 FAM9BQ8IZU0 186 aa22.03■■□□□ 1.12
SHISA2-201ENST00000319420 ERBINQ96RT1 1412 aa22.03■■□□□ 1.12
SHISA2-201ENST00000319420 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
SHISA2-201ENST00000319420 SUPT16HQ9Y5B9 1047 aaKnown RBP22.01■■□□□ 1.11
SHISA2-201ENST00000319420 CNTLNQ9NXG0 1405 aa22.01■■□□□ 1.11
SHISA2-201ENST00000319420 HNRNPUQ00839 825 aaKnown RBP eCLIP22.01■■□□□ 1.11
SHISA2-201ENST00000319420 PLXNC1O60486 1568 aa22.01■■□□□ 1.11
SHISA2-201ENST00000319420 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
SHISA2-201ENST00000319420 ZFYVE16Q7Z3T8 1539 aa21.99■■□□□ 1.11
SHISA2-201ENST00000319420 PRKRIP1Q9H875 184 aaPredicted RBP21.98■■□□□ 1.11
SHISA2-201ENST00000319420 MRS2Q9HD23 443 aa21.98■■□□□ 1.11
SHISA2-201ENST00000319420 ATP7AQ04656 1500 aa21.96■■□□□ 1.11
SHISA2-201ENST00000319420 ABCA9Q8IUA7 1624 aa21.96■■□□□ 1.11
SHISA2-201ENST00000319420 UNC13BO14795 1591 aa21.96■■□□□ 1.11
SHISA2-201ENST00000319420 KANK1Q14678 1352 aa21.94■■□□□ 1.1
SHISA2-201ENST00000319420 BCANQ96GW7 911 aa21.94■■□□□ 1.1
SHISA2-201ENST00000319420 A2MP01023 1474 aa21.94■■□□□ 1.1
SHISA2-201ENST00000319420 RTEL1-TNFRSF6BF6WH68 1400 aa21.93■■□□□ 1.1
SHISA2-201ENST00000319420 RALGAPBQ86X10 1494 aa21.92■■□□□ 1.1
SHISA2-201ENST00000319420 UHRF1BP1Q6BDS2 1440 aa21.92■■□□□ 1.1
SHISA2-201ENST00000319420 DHX29Q7Z478 1369 aaKnown RBP21.91■■□□□ 1.1
SHISA2-201ENST00000319420 FAM69CQ0P6D2 419 aa21.91■■□□□ 1.1
SHISA2-201ENST00000319420 IQGAP3Q86VI3 1631 aa21.91■■□□□ 1.1
SHISA2-201ENST00000319420 PRAG1Q86YV5 1406 aa21.91■■□□□ 1.1
SHISA2-201ENST00000319420 BCORL1Q5H9F3 1711 aa21.9■■□□□ 1.1
SHISA2-201ENST00000319420 ARAP3Q8WWN8 1544 aa21.89■■□□□ 1.09
SHISA2-201ENST00000319420 KDM5CP41229 1560 aa21.86■■□□□ 1.09
SHISA2-201ENST00000319420 ZNF518AQ6AHZ1 1483 aa21.86■■□□□ 1.09
SHISA2-201ENST00000319420 NUTM2DQ5VT03 806 aaPredicted RBP21.85■■□□□ 1.09
SHISA2-201ENST00000319420 WASHC2CQ9Y4E1 1318 aa21.85■■□□□ 1.09
SHISA2-201ENST00000319420 MAGI2Q86UL8 1455 aa21.85■■□□□ 1.09
SHISA2-201ENST00000319420 ATP10AO60312 1499 aa21.84■■□□□ 1.09
SHISA2-201ENST00000319420 UGGT1Q9NYU2 1555 aa21.83■■□□□ 1.09
SHISA2-201ENST00000319420 INO80Q9ULG1 1556 aaPredicted RBP21.82■■□□□ 1.08
SHISA2-201ENST00000319420 CFAP65Q6ZU64 1925 aaKnown RBP21.82■■□□□ 1.08
SHISA2-201ENST00000319420 FKBP8Q14318 412 aa21.81■■□□□ 1.08
SHISA2-201ENST00000319420 E9PCH4 1651 aa21.81■■□□□ 1.08
SHISA2-201ENST00000319420 POGZQ7Z3K3 1410 aa21.8■■□□□ 1.08
SHISA2-201ENST00000319420 CFAP70Q5T0N1 1121 aa21.78■■□□□ 1.08
SHISA2-201ENST00000319420 POLR1AO95602 1720 aaPredicted RBP21.78■■□□□ 1.08
SHISA2-201ENST00000319420 KIDINS220Q9ULH0 1771 aa21.78■■□□□ 1.08
SHISA2-201ENST00000319420 CC2D1BQ5T0F9 858 aaKnown RBP21.77■■□□□ 1.08
SHISA2-201ENST00000319420 IRX6P78412 446 aaPredicted RBP21.77■■□□□ 1.07
SHISA2-201ENST00000319420 DISP3Q9P2K9 1392 aa21.76■■□□□ 1.07
SHISA2-201ENST00000319420 ADGRF5Q8IZF2 1346 aa21.76■■□□□ 1.07
SHISA2-201ENST00000319420 TESK2Q96S53 571 aa21.75■■□□□ 1.07
SHISA2-201ENST00000319420 MLECQ14165 292 aa21.74■■□□□ 1.07
SHISA2-201ENST00000319420 TMC1Q8TDI8 760 aa21.74■■□□□ 1.07
SHISA2-201ENST00000319420 CLTCL1P53675 1640 aa21.71■■□□□ 1.07
SHISA2-201ENST00000319420 TMF1P82094 1093 aa21.71■■□□□ 1.07
SHISA2-201ENST00000319420 TRPM1Q7Z4N2 1603 aa21.71■■□□□ 1.07
SHISA2-201ENST00000319420 BCL11AQ9H165 835 aa21.71■■□□□ 1.07
SHISA2-201ENST00000319420 YEATS2Q9ULM3 1422 aa21.71■■□□□ 1.07
SHISA2-201ENST00000319420 PANK3Q9H999 370 aa21.71■■□□□ 1.07
SHISA2-201ENST00000319420 SALL2Q9Y467 1007 aaPredicted RBP21.7■■□□□ 1.06
SHISA2-201ENST00000319420 PTPRTO14522 1441 aa21.7■■□□□ 1.06
SHISA2-201ENST00000319420 NEFLP07196 543 aa21.7■■□□□ 1.06
SHISA2-201ENST00000319420 TRPM2O94759 1503 aa21.69■■□□□ 1.06
SHISA2-201ENST00000319420 ARID4BQ4LE39 1312 aaPredicted RBP21.69■■□□□ 1.06
SHISA2-201ENST00000319420 PRDM15P57071 1507 aaPredicted RBP21.69■■□□□ 1.06
SHISA2-201ENST00000319420 RIMBP3CA6NJZ7 1639 aa21.68■■□□□ 1.06
SHISA2-201ENST00000319420 RIMBP3BA6NNM3 1639 aa21.68■■□□□ 1.06
SHISA2-201ENST00000319420 RIMBP3Q9UFD9 1639 aa21.68■■□□□ 1.06
SHISA2-201ENST00000319420 MROH1Q8NDA8 1641 aa21.67■■□□□ 1.06
SHISA2-201ENST00000319420 TMEM132EQ6IEE7 984 aa21.67■■□□□ 1.06
SHISA2-201ENST00000319420 GPRASP1Q5JY77 1395 aa21.66■■□□□ 1.06
SHISA2-201ENST00000319420 TET3O43151 1660 aa21.66■■□□□ 1.06
SHISA2-201ENST00000319420 NPATQ14207 1427 aa21.66■■□□□ 1.06
SHISA2-201ENST00000319420 DEPDC5O75140 1603 aa21.66■■□□□ 1.06
SHISA2-201ENST00000319420 SPHKAPQ2M3C7 1700 aa21.66■■□□□ 1.06
SHISA2-201ENST00000319420 MLH3Q9UHC1 1453 aa21.65■■□□□ 1.06
SHISA2-201ENST00000319420 HECW2Q9P2P5 1572 aa21.64■■□□□ 1.06
SHISA2-201ENST00000319420 TSPOAP1O95153 1857 aa21.64■■□□□ 1.06
SHISA2-201ENST00000319420 TRAK1Q9UPV9 953 aa21.64■■□□□ 1.06
SHISA2-201ENST00000319420 FRMPD1Q5SYB0 1578 aa21.64■■□□□ 1.05
SHISA2-201ENST00000319420 CEP152O94986 1710 aa21.63■■□□□ 1.05
SHISA2-201ENST00000319420 PRKCSHP14314 528 aaPredicted RBP21.63■■□□□ 1.05
SHISA2-201ENST00000319420 ABCA6Q8N139 1617 aa21.62■■□□□ 1.05
SHISA2-201ENST00000319420 NEO1Q92859 1461 aa21.62■■□□□ 1.05
SHISA2-201ENST00000319420 PPRC1Q5VV67 1664 aaKnown RBP21.62■■□□□ 1.05
SHISA2-201ENST00000319420 FBXO31Q5XUX0 539 aaPredicted RBP21.62■■□□□ 1.05
SHISA2-201ENST00000319420 NOS1P29475 1434 aa21.61■■□□□ 1.05
SHISA2-201ENST00000319420 VWDEQ8N2E2 1590 aa21.61■■□□□ 1.05
SHISA2-201ENST00000319420 EFCAB6Q5THR3 1501 aa21.61■■□□□ 1.05
SHISA2-201ENST00000319420 SAFB2Q14151 953 aaKnown RBP eCLIP21.6■■□□□ 1.05
SHISA2-201ENST00000319420 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
SHISA2-201ENST00000319420 IDI1Q13907 227 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms