RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 RPRD2Q5VT52 1461 aaKnown RBP20.02■□□□□ 0.79
TFE3-201ENST00000315869 NPM1P06748 294 aaKnown RBP eCLIP20.01■□□□□ 0.79
TFE3-201ENST00000315869 CDC42BPBQ9Y5S2 1711 aa20■□□□□ 0.79
TFE3-201ENST00000315869 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
TFE3-201ENST00000315869 ST20-MTHFSA0A0A6YYL1 179 aa19.99■□□□□ 0.79
TFE3-201ENST00000315869 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
TFE3-201ENST00000315869 CCDC141Q6ZP82 1450 aa19.98■□□□□ 0.79
TFE3-201ENST00000315869 ZCCHC11Q5TAX3 1644 aaKnown RBP19.98■□□□□ 0.79
TFE3-201ENST00000315869 ARHGEF12Q9NZN5 1544 aa19.98■□□□□ 0.79
TFE3-201ENST00000315869 TRAPPC8Q9Y2L5 1435 aa19.96■□□□□ 0.79
TFE3-201ENST00000315869 PAK3O75914 559 aaPredicted RBP19.95■□□□□ 0.78
TFE3-201ENST00000315869 KIAA1107Q9UPP5 1409 aa19.95■□□□□ 0.78
TFE3-201ENST00000315869 PLEKHH2Q8IVE3 1493 aa19.95■□□□□ 0.78
TFE3-201ENST00000315869 DEKP35659 375 aaKnown RBP19.94■□□□□ 0.78
TFE3-201ENST00000315869 SPAG9O60271 1321 aaKnown RBP19.94■□□□□ 0.78
TFE3-201ENST00000315869 ADGRL2O95490 1459 aa19.94■□□□□ 0.78
TFE3-201ENST00000315869 RTL5Q5HYW3 569 aaPredicted RBP19.93■□□□□ 0.78
TFE3-201ENST00000315869 ZBTB47Q9UFB7 747 aaPredicted RBP19.92■□□□□ 0.78
TFE3-201ENST00000315869 PREX2Q70Z35 1606 aa19.91■□□□□ 0.78
TFE3-201ENST00000315869 TEX14Q8IWB6 1497 aa19.91■□□□□ 0.78
TFE3-201ENST00000315869 PNISRQ8TF01 805 aaKnown RBP19.91■□□□□ 0.78
TFE3-201ENST00000315869 ADGBQ8N7X0 1667 aa19.91■□□□□ 0.78
TFE3-201ENST00000315869 PLCH2O75038 1416 aa19.9■□□□□ 0.78
TFE3-201ENST00000315869 CROCC2H7BZ55 1655 aa19.9■□□□□ 0.78
TFE3-201ENST00000315869 CC2D1BQ5T0F9 858 aaKnown RBP19.89■□□□□ 0.77
TFE3-201ENST00000315869 SPATA31E1Q6ZUB1 1445 aa19.88■□□□□ 0.77
TFE3-201ENST00000315869 RSPH4AQ5TD94 716 aa19.88■□□□□ 0.77
TFE3-201ENST00000315869 ASXL2Q76L83 1435 aa19.88■□□□□ 0.77
TFE3-201ENST00000315869 KIF3BO15066 747 aa19.87■□□□□ 0.77
TFE3-201ENST00000315869 SMG6Q86US8 1419 aaKnown RBP19.86■□□□□ 0.77
TFE3-201ENST00000315869 EXOC6Q8TAG9 804 aa19.86■□□□□ 0.77
TFE3-201ENST00000315869 DHX29Q7Z478 1369 aaKnown RBP19.86■□□□□ 0.77
TFE3-201ENST00000315869 SCAPERQ9BY12 1400 aa19.85■□□□□ 0.77
TFE3-201ENST00000315869 SHANK2Q9UPX8 1470 aa19.84■□□□□ 0.77
TFE3-201ENST00000315869 MYO5CQ9NQX4 1742 aa19.84■□□□□ 0.77
TFE3-201ENST00000315869 WDR7Q9Y4E6 1490 aa19.84■□□□□ 0.77
TFE3-201ENST00000315869 ROCK2O75116 1388 aaKnown RBP19.83■□□□□ 0.77
TFE3-201ENST00000315869 RCAN3Q9UKA8 241 aa19.83■□□□□ 0.76
TFE3-201ENST00000315869 UHRF1BP1LA0JNW5 1464 aa19.81■□□□□ 0.76
TFE3-201ENST00000315869 RAPGEF3O95398 923 aa19.81■□□□□ 0.76
TFE3-201ENST00000315869 FANCAO15360 1455 aa19.81■□□□□ 0.76
TFE3-201ENST00000315869 NBPF1Q3BBV0 1214 aa19.81■□□□□ 0.76
TFE3-201ENST00000315869 IPO9Q96P70 1041 aaKnown RBP19.8■□□□□ 0.76
TFE3-201ENST00000315869 MYBBP1AQ9BQG0 1328 aaKnown RBP19.8■□□□□ 0.76
TFE3-201ENST00000315869 PLIN1O60240 522 aa19.8■□□□□ 0.76
TFE3-201ENST00000315869 ARHGEF5Q12774 1597 aa19.8■□□□□ 0.76
TFE3-201ENST00000315869 FAM135AQ9P2D6 1515 aa19.79■□□□□ 0.76
TFE3-201ENST00000315869 GGT6Q6P531 493 aa19.79■□□□□ 0.76
TFE3-201ENST00000315869 CDCA7LQ96GN5 454 aa19.79■□□□□ 0.76
TFE3-201ENST00000315869 LAS1LQ9Y4W2 734 aaKnown RBP19.79■□□□□ 0.76
TFE3-201ENST00000315869 RRP1P56182 461 aaKnown RBP19.78■□□□□ 0.76
TFE3-201ENST00000315869 RALBP1Q15311 655 aa19.78■□□□□ 0.76
TFE3-201ENST00000315869 CCDC144AA2RUR9 1427 aa19.77■□□□□ 0.76
TFE3-201ENST00000315869 CHGAP10645 457 aaKnown RBP19.76■□□□□ 0.75
TFE3-201ENST00000315869 NLRP13Q86W25 1043 aa19.75■□□□□ 0.75
TFE3-201ENST00000315869 ADGRL1O94910 1474 aa19.75■□□□□ 0.75
TFE3-201ENST00000315869 KTN1Q86UP2 1357 aaKnown RBP19.73■□□□□ 0.75
TFE3-201ENST00000315869 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
TFE3-201ENST00000315869 ARID4BQ4LE39 1312 aaPredicted RBP19.73■□□□□ 0.75
TFE3-201ENST00000315869 SKAP1Q86WV1 359 aa19.73■□□□□ 0.75
TFE3-201ENST00000315869 ABCC1P33527 1531 aa19.72■□□□□ 0.75
TFE3-201ENST00000315869 PLA2R1Q13018 1463 aa19.7■□□□□ 0.74
TFE3-201ENST00000315869 CD109Q6YHK3 1445 aa19.69■□□□□ 0.74
TFE3-201ENST00000315869 BRD4O60885 1362 aaPredicted RBP19.69■□□□□ 0.74
TFE3-201ENST00000315869 PANK3Q9H999 370 aa19.69■□□□□ 0.74
TFE3-201ENST00000315869 BCORL1Q5H9F3 1711 aa19.68■□□□□ 0.74
TFE3-201ENST00000315869 PDE4AP27815 886 aa19.67■□□□□ 0.74
TFE3-201ENST00000315869 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
TFE3-201ENST00000315869 RNF123Q5XPI4 1314 aa19.67■□□□□ 0.74
TFE3-201ENST00000315869 DUOX2Q9NRD8 1548 aa19.65■□□□□ 0.74
TFE3-201ENST00000315869 DAXXQ9UER7 740 aaPredicted RBP19.65■□□□□ 0.74
TFE3-201ENST00000315869 TCERG1O14776 1098 aaKnown RBP19.64■□□□□ 0.73
TFE3-201ENST00000315869 FAM69CQ0P6D2 419 aa19.64■□□□□ 0.73
TFE3-201ENST00000315869 NEFMP07197 916 aa19.64■□□□□ 0.73
TFE3-201ENST00000315869 CRBNQ96SW2 442 aa19.63■□□□□ 0.73
TFE3-201ENST00000315869 WDR43Q15061 677 aaKnown RBP eCLIP19.62■□□□□ 0.73
TFE3-201ENST00000315869 TMF1P82094 1093 aa19.61■□□□□ 0.73
TFE3-201ENST00000315869 RALGAPBQ86X10 1494 aa19.6■□□□□ 0.73
TFE3-201ENST00000315869 ZFYVE16Q7Z3T8 1539 aa19.59■□□□□ 0.73
TFE3-201ENST00000315869 PDE3BQ13370 1112 aa19.59■□□□□ 0.73
TFE3-201ENST00000315869 CFAP65Q6ZU64 1925 aaKnown RBP19.59■□□□□ 0.73
TFE3-201ENST00000315869 KNSTRNQ9Y448 316 aa19.59■□□□□ 0.73
TFE3-201ENST00000315869 KDM5DQ9BY66 1539 aa19.59■□□□□ 0.73
TFE3-201ENST00000315869 ERBINQ96RT1 1412 aa19.58■□□□□ 0.73
TFE3-201ENST00000315869 RTN4Q9NQC3 1192 aaKnown RBP19.58■□□□□ 0.73
TFE3-201ENST00000315869 ATP7AQ04656 1500 aa19.58■□□□□ 0.72
TFE3-201ENST00000315869 MAST1Q9Y2H9 1570 aa19.57■□□□□ 0.72
TFE3-201ENST00000315869 A2MP01023 1474 aa19.57■□□□□ 0.72
TFE3-201ENST00000315869 KDM5CP41229 1560 aa19.57■□□□□ 0.72
TFE3-201ENST00000315869 LRPPRCP42704 1394 aaKnown RBP19.57■□□□□ 0.72
TFE3-201ENST00000315869 SLC4A3P48751 1232 aa19.56■□□□□ 0.72
TFE3-201ENST00000315869 MLECQ14165 292 aa19.56■□□□□ 0.72
TFE3-201ENST00000315869 KANK1Q14678 1352 aa19.56■□□□□ 0.72
TFE3-201ENST00000315869 PLXNC1O60486 1568 aa19.56■□□□□ 0.72
TFE3-201ENST00000315869 ADAMTS8Q9UP79 889 aa19.56■□□□□ 0.72
TFE3-201ENST00000315869 ABCA9Q8IUA7 1624 aa19.55■□□□□ 0.72
TFE3-201ENST00000315869 RGS3P49796 1198 aa19.55■□□□□ 0.72
TFE3-201ENST00000315869 UGGT1Q9NYU2 1555 aa19.55■□□□□ 0.72
TFE3-201ENST00000315869 WASHC2CQ9Y4E1 1318 aa19.54■□□□□ 0.72
TFE3-201ENST00000315869 C20orf194Q5TEA3 1177 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms