RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
SPAST-201ENST00000315285 GOLGA6L4A6NEF3 574 aa17.36■□□□□ 0.37
SPAST-201ENST00000315285 GZF1Q9H116 711 aaPredicted RBP17.36■□□□□ 0.37
SPAST-201ENST00000315285 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
SPAST-201ENST00000315285 ZNF644Q9H582 1327 aaPredicted RBP17.36■□□□□ 0.37
SPAST-201ENST00000315285 CASKIN1Q8WXD9 1431 aa17.36■□□□□ 0.37
SPAST-201ENST00000315285 RRP7AQ9Y3A4 280 aaKnown RBP17.35■□□□□ 0.37
SPAST-201ENST00000315285 NAP1L2Q9ULW6 460 aaPredicted RBP17.34■□□□□ 0.37
SPAST-201ENST00000315285 MSNP26038 577 aaKnown RBP17.34■□□□□ 0.37
SPAST-201ENST00000315285 CDK11BP21127 795 aaKnown RBP17.33■□□□□ 0.37
SPAST-201ENST00000315285 CRBNQ96SW2 442 aa17.33■□□□□ 0.37
SPAST-201ENST00000315285 CNTLNQ9NXG0 1405 aa17.33■□□□□ 0.36
SPAST-201ENST00000315285 PTMSP20962 102 aa17.33■□□□□ 0.36
SPAST-201ENST00000315285 TAOK2Q9UL54 1235 aa17.33■□□□□ 0.36
SPAST-201ENST00000315285 NCOA2Q15596 1464 aa17.33■□□□□ 0.36
SPAST-201ENST00000315285 FANCIQ9NVI1 1328 aa17.32■□□□□ 0.36
SPAST-201ENST00000315285 E9PSI1 815 aa17.32■□□□□ 0.36
SPAST-201ENST00000315285 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
SPAST-201ENST00000315285 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
SPAST-201ENST00000315285 WASHC2AQ641Q2 1341 aa17.3■□□□□ 0.36
SPAST-201ENST00000315285 FYCO1Q9BQS8 1478 aa17.3■□□□□ 0.36
SPAST-201ENST00000315285 STK31Q9BXU1 1019 aa17.3■□□□□ 0.36
SPAST-201ENST00000315285 BCL2L13Q9BXK5 485 aa17.29■□□□□ 0.36
SPAST-201ENST00000315285 APAF1O14727 1248 aa17.29■□□□□ 0.36
SPAST-201ENST00000315285 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
SPAST-201ENST00000315285 GOLGA6L6A8MZA4 724 aa17.29■□□□□ 0.36
SPAST-201ENST00000315285 LMOD3Q0VAK6 560 aa17.29■□□□□ 0.36
SPAST-201ENST00000315285 USP35Q9P2H5 1018 aa17.28■□□□□ 0.36
SPAST-201ENST00000315285 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.28■□□□□ 0.36
SPAST-201ENST00000315285 CGNL1Q0VF96 1302 aa17.28■□□□□ 0.36
SPAST-201ENST00000315285 HMMRO75330 724 aa17.28■□□□□ 0.36
SPAST-201ENST00000315285 PRXQ9BXM0 1461 aa17.26■□□□□ 0.35
SPAST-201ENST00000315285 GOLGA6L3A6NEY3 463 aa17.26■□□□□ 0.35
SPAST-201ENST00000315285 NRDCO43847 1150 aa17.26■□□□□ 0.35
SPAST-201ENST00000315285 ANKRD50Q9ULJ7 1429 aa17.25■□□□□ 0.35
SPAST-201ENST00000315285 COG6Q9Y2V7 657 aa17.25■□□□□ 0.35
SPAST-201ENST00000315285 EVC2Q86UK5 1308 aa17.24■□□□□ 0.35
SPAST-201ENST00000315285 ZKSCAN2Q63HK3 967 aa17.24■□□□□ 0.35
SPAST-201ENST00000315285 VGFO15240 615 aaPredicted RBP17.24■□□□□ 0.35
SPAST-201ENST00000315285 SLC4A3P48751 1232 aa17.24■□□□□ 0.35
SPAST-201ENST00000315285 CHMP4AQ9BY43 222 aa17.24■□□□□ 0.35
SPAST-201ENST00000315285 CHAF1AQ13111 956 aaPredicted RBP17.24■□□□□ 0.35
SPAST-201ENST00000315285 SLC4A10Q6U841 1118 aa17.24■□□□□ 0.35
SPAST-201ENST00000315285 CFTRP13569 1480 aa17.23■□□□□ 0.35
SPAST-201ENST00000315285 NGEFQ8N5V2 710 aa17.22■□□□□ 0.35
SPAST-201ENST00000315285 MIA2Q96PC5 1412 aa17.22■□□□□ 0.35
SPAST-201ENST00000315285 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
SPAST-201ENST00000315285 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
SPAST-201ENST00000315285 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
SPAST-201ENST00000315285 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
SPAST-201ENST00000315285 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
SPAST-201ENST00000315285 DRC7Q8IY82 874 aa17.19■□□□□ 0.34
SPAST-201ENST00000315285 NGDNQ8NEJ9 315 aaKnown RBP17.19■□□□□ 0.34
SPAST-201ENST00000315285 SYAP1Q96A49 352 aaPredicted RBP17.19■□□□□ 0.34
SPAST-201ENST00000315285 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
SPAST-201ENST00000315285 AMPHP49418 695 aa17.18■□□□□ 0.34
SPAST-201ENST00000315285 BRD4O60885 1362 aaPredicted RBP17.17■□□□□ 0.34
SPAST-201ENST00000315285 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
SPAST-201ENST00000315285 NPHP1O15259 732 aa17.17■□□□□ 0.34
SPAST-201ENST00000315285 NUTM2FA1L443 756 aa17.17■□□□□ 0.34
SPAST-201ENST00000315285 STAC3Q96MF2 364 aa17.17■□□□□ 0.34
SPAST-201ENST00000315285 ANKRD45Q5TZF3 282 aa17.16■□□□□ 0.34
SPAST-201ENST00000315285 HDAC5Q9UQL6 1122 aa17.16■□□□□ 0.34
SPAST-201ENST00000315285 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
SPAST-201ENST00000315285 MINK1Q8N4C8 1332 aaPredicted RBP17.15■□□□□ 0.34
SPAST-201ENST00000315285 EFCAB5A4FU69 1503 aa17.15■□□□□ 0.34
SPAST-201ENST00000315285 ST18O60284 1047 aa17.15■□□□□ 0.34
SPAST-201ENST00000315285 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
SPAST-201ENST00000315285 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.33
SPAST-201ENST00000315285 GSE1Q14687 1217 aa17.14■□□□□ 0.33
SPAST-201ENST00000315285 GPATCH3Q96I76 525 aa17.14■□□□□ 0.33
SPAST-201ENST00000315285 HFM1A2PYH4 1435 aa17.14■□□□□ 0.33
SPAST-201ENST00000315285 COG3Q96JB2 828 aa17.14■□□□□ 0.33
SPAST-201ENST00000315285 TIAM1Q13009 1591 aa17.13■□□□□ 0.33
SPAST-201ENST00000315285 DDX11L8A8MPP1 907 aa17.13■□□□□ 0.33
SPAST-201ENST00000315285 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
SPAST-201ENST00000315285 NOL8Q76FK4 1167 aaKnown RBP17.13■□□□□ 0.33
SPAST-201ENST00000315285 RUNDC1Q96C34 613 aa17.12■□□□□ 0.33
SPAST-201ENST00000315285 DZIP1LQ8IYY4 767 aaKnown RBP17.12■□□□□ 0.33
SPAST-201ENST00000315285 LTV1Q96GA3 475 aaPredicted RBP17.12■□□□□ 0.33
SPAST-201ENST00000315285 DIAPH1O60610 1272 aaKnown RBP17.11■□□□□ 0.33
SPAST-201ENST00000315285 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
SPAST-201ENST00000315285 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
SPAST-201ENST00000315285 GRIN2BQ13224 1484 aa17.1■□□□□ 0.33
SPAST-201ENST00000315285 EHBP1L1Q8N3D4 1523 aa17.1■□□□□ 0.33
SPAST-201ENST00000315285 GNL2Q13823 731 aaKnown RBP17.1■□□□□ 0.33
SPAST-201ENST00000315285 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
SPAST-201ENST00000315285 RIPK4P57078 832 aa17.09■□□□□ 0.33
SPAST-201ENST00000315285 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.09■□□□□ 0.33
SPAST-201ENST00000315285 ZNF330Q9Y3S2 320 aaPredicted RBP17.09■□□□□ 0.33
SPAST-201ENST00000315285 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.32
SPAST-201ENST00000315285 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
SPAST-201ENST00000315285 CHMP3Q9Y3E7 222 aa17.06■□□□□ 0.32
SPAST-201ENST00000315285 KIAA1107Q9UPP5 1409 aa17.06■□□□□ 0.32
SPAST-201ENST00000315285 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
SPAST-201ENST00000315285 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
SPAST-201ENST00000315285 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
SPAST-201ENST00000315285 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
SPAST-201ENST00000315285 DDX49Q9Y6V7 483 aaKnown RBP17.04■□□□□ 0.32
SPAST-201ENST00000315285 RILPL2Q969X0 211 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms