RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 WASLO00401 505 aaPredicted RBP1.9□□□□□ -2.1
CEP290-201ENST00000309041 PRR16Q569H4 304 aa1.9□□□□□ -2.1
CEP290-201ENST00000309041 RSPH4AQ5TD94 716 aa1.9□□□□□ -2.11
CEP290-201ENST00000309041 TRPM4Q8TD43 1214 aa1.9□□□□□ -2.11
CEP290-201ENST00000309041 CITED4Q96RK1 184 aa1.9□□□□□ -2.11
CEP290-201ENST00000309041 TYRP1P17643 537 aa1.9□□□□□ -2.11
CEP290-201ENST00000309041 CACTIN-AS1Q8N1I8 211 aa1.9□□□□□ -2.11
CEP290-201ENST00000309041 SPATA32Q96LK8 384 aa1.9□□□□□ -2.11
CEP290-201ENST00000309041 RNF135Q8IUD6 432 aa1.89□□□□□ -2.11
CEP290-201ENST00000309041 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP1.89□□□□□ -2.118e-7■■■■■ 29.5
CEP290-201ENST00000309041 AMHR2Q16671 573 aa1.89□□□□□ -2.11
CEP290-201ENST00000309041 ZBTB10Q96DT7 871 aa1.89□□□□□ -2.11
CEP290-201ENST00000309041 SRRTQ9BXP5 876 aaKnown RBP1.89□□□□□ -2.11
CEP290-201ENST00000309041 MTMR7Q9Y216 660 aa1.89□□□□□ -2.11
CEP290-201ENST00000309041 CTCFP49711 727 aaPredicted RBP1.89□□□□□ -2.11
CEP290-201ENST00000309041 BANK1Q8NDB2 785 aa1.89□□□□□ -2.11
CEP290-201ENST00000309041 BCCIPQ9P287 314 aaKnown RBP eCLIP1.89□□□□□ -2.11
CEP290-201ENST00000309041 PAXBP1Q9Y5B6 917 aa1.89□□□□□ -2.11
CEP290-201ENST00000309041 MORC1Q86VD1 984 aa1.89□□□□□ -2.11
CEP290-201ENST00000309041 CERKQ8TCT0 537 aa1.89□□□□□ -2.11
CEP290-201ENST00000309041 PKNOX2Q96KN3 472 aa1.89□□□□□ -2.11
CEP290-201ENST00000309041 KMT2BQ9UMN6 2715 aaPredicted RBP1.89□□□□□ -2.11
CEP290-201ENST00000309041 RPLP1P05386 114 aaKnown RBP1.89□□□□□ -2.11
CEP290-201ENST00000309041 PANK1Q8TE04 598 aa1.89□□□□□ -2.11
CEP290-201ENST00000309041 SLC51AQ86UW1 340 aa1.88□□□□□ -2.11
CEP290-201ENST00000309041 ZC3H10Q96K80 434 aaKnown RBP1.88□□□□□ -2.11
CEP290-201ENST00000309041 GZF1Q9H116 711 aaPredicted RBP1.88□□□□□ -2.11
CEP290-201ENST00000309041 ZNF608Q9ULD9 1512 aaPredicted RBP1.88□□□□□ -2.11
CEP290-201ENST00000309041 RSRC2Q7L4I2 434 aaKnown RBP1.88□□□□□ -2.11
CEP290-201ENST00000309041 UTP3Q9NQZ2 479 aaKnown RBP eCLIP1.88□□□□□ -2.116e-9■■■■■ 134.6
CEP290-201ENST00000309041 ZC3H12BQ5HYM0 836 aaKnown RBP1.88□□□□□ -2.11
CEP290-201ENST00000309041 GPC6Q9Y625 555 aaPredicted RBP1.88□□□□□ -2.11
CEP290-201ENST00000309041 PUS7Q96PZ0 661 aaKnown RBP1.88□□□□□ -2.11
CEP290-201ENST00000309041 CHIC2Q9UKJ5 165 aa1.88□□□□□ -2.11
CEP290-201ENST00000309041 SLC34A2O95436 690 aa1.88□□□□□ -2.11
CEP290-201ENST00000309041 U2AF1L5P0DN76 240 aaPredicted RBP1.88□□□□□ -2.11
CEP290-201ENST00000309041 U2AF1Q01081 240 aaKnown RBP eCLIP1.88□□□□□ -2.11
CEP290-201ENST00000309041 WASHC4Q2M389 1173 aa1.87□□□□□ -2.11
CEP290-201ENST00000309041 GPCPD1Q9NPB8 672 aa1.87□□□□□ -2.11
CEP290-201ENST00000309041 BCORL1Q5H9F3 1711 aa1.87□□□□□ -2.11
CEP290-201ENST00000309041 POTECB2RU33 542 aa1.87□□□□□ -2.11
CEP290-201ENST00000309041 NCLP19338 710 aaKnown RBP1.87□□□□□ -2.11
CEP290-201ENST00000309041 RBM27Q9P2N5 1060 aaKnown RBP1.87□□□□□ -2.11
CEP290-201ENST00000309041 DKK1O94907 266 aa1.87□□□□□ -2.11
CEP290-201ENST00000309041 NOC3LQ8WTT2 800 aaKnown RBP1.87□□□□□ -2.11
CEP290-201ENST00000309041 TMEM121BQ9BXQ6 578 aaPredicted RBP1.87□□□□□ -2.11
CEP290-201ENST00000309041 NEFLP07196 543 aa1.87□□□□□ -2.11
CEP290-201ENST00000309041 NSMCE3Q96MG7 304 aa1.87□□□□□ -2.11
CEP290-201ENST00000309041 FBXO22Q8NEZ5 403 aa1.87□□□□□ -2.11
CEP290-201ENST00000309041 DNAJC2Q99543 621 aaKnown RBP1.86□□□□□ -2.11
CEP290-201ENST00000309041 LAS1LQ9Y4W2 734 aaKnown RBP1.86□□□□□ -2.11
CEP290-201ENST00000309041 CHGAP10645 457 aaKnown RBP1.86□□□□□ -2.11
CEP290-201ENST00000309041 PCMTD1Q96MG8 357 aaPredicted RBP1.86□□□□□ -2.11
CEP290-201ENST00000309041 SOX12O15370 315 aa1.86□□□□□ -2.11
CEP290-201ENST00000309041 HSP90AB1P08238 724 aaKnown RBP1.86□□□□□ -2.11
CEP290-201ENST00000309041 POTEIP0CG38 1075 aa1.86□□□□□ -2.11
CEP290-201ENST00000309041 NUBP1P53384 320 aa1.86□□□□□ -2.11
CEP290-201ENST00000309041 BRINP3Q76B58 766 aa1.86□□□□□ -2.11
CEP290-201ENST00000309041 BCL11BQ9C0K0 894 aaPredicted RBP1.86□□□□□ -2.11
CEP290-201ENST00000309041 LMOD2Q6P5Q4 547 aa1.86□□□□□ -2.11
CEP290-201ENST00000309041 RETREG2Q8NC44 543 aa1.86□□□□□ -2.11
CEP290-201ENST00000309041 ZCCHC8Q6NZY4 707 aaKnown RBP1.86□□□□□ -2.11
CEP290-201ENST00000309041 CADPSQ9ULU8 1353 aa1.86□□□□□ -2.11
CEP290-201ENST00000309041 ZNF467Q7Z7K2 595 aaPredicted RBP1.85□□□□□ -2.11
CEP290-201ENST00000309041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP1.85□□□□□ -2.11
CEP290-201ENST00000309041 KDM6BO15054 1643 aa1.85□□□□□ -2.11
CEP290-201ENST00000309041 GAS2L2Q8NHY3 880 aa1.85□□□□□ -2.11
CEP290-201ENST00000309041 KCNV2Q8TDN2 545 aa1.85□□□□□ -2.11
CEP290-201ENST00000309041 PNMA2Q9UL42 364 aa1.85□□□□□ -2.11
CEP290-201ENST00000309041 U3KPZ7 1027 aaPredicted RBP1.85□□□□□ -2.11
CEP290-201ENST00000309041 CCDC163A0A0D9SF12 145 aa1.85□□□□□ -2.11
CEP290-201ENST00000309041 POTEFA5A3E0 1075 aa1.85□□□□□ -2.11
CEP290-201ENST00000309041 CAPNS1P04632 268 aa1.85□□□□□ -2.11
CEP290-201ENST00000309041 TBC1D10BQ4KMP7 808 aaPredicted RBP1.85□□□□□ -2.11
CEP290-201ENST00000309041 HP1BP3Q5SSJ5 553 aaPredicted RBP1.85□□□□□ -2.11
CEP290-201ENST00000309041 MPP4Q96JB8 637 aa1.85□□□□□ -2.11
CEP290-201ENST00000309041 NOVA2Q9UNW9 492 aaKnown RBP1.85□□□□□ -2.11
CEP290-201ENST00000309041 PTGER2P43116 358 aa1.85□□□□□ -2.11
CEP290-201ENST00000309041 RGS22Q8NE09 1264 aa1.85□□□□□ -2.11
CEP290-201ENST00000309041 HIRIP3Q9BW71 556 aaPredicted RBP1.84□□□□□ -2.11
CEP290-201ENST00000309041 RSPH6AQ9H0K4 717 aa1.84□□□□□ -2.11
CEP290-201ENST00000309041 SPOCK2Q92563 424 aa1.84□□□□□ -2.11
CEP290-201ENST00000309041 PRR14Q9BWN1 585 aa1.84□□□□□ -2.11
CEP290-201ENST00000309041 DNAI1Q9UI46 699 aa1.84□□□□□ -2.11
CEP290-201ENST00000309041 POTEB3A0JP26 581 aa1.84□□□□□ -2.11
CEP290-201ENST00000309041 RGS3P49796 1198 aa1.84□□□□□ -2.11
CEP290-201ENST00000309041 LCE2DQ5TA82 110 aaPredicted RBP1.84□□□□□ -2.11
CEP290-201ENST00000309041 POTEBQ6S5H4 581 aa1.84□□□□□ -2.11
CEP290-201ENST00000309041 ARHGEF1Q92888 912 aaKnown RBP1.84□□□□□ -2.11
CEP290-201ENST00000309041 TXNDC2Q86VQ3 553 aa1.84□□□□□ -2.11
CEP290-201ENST00000309041 DCAF8L1A6NGE4 600 aa1.84□□□□□ -2.12
CEP290-201ENST00000309041 EGR1P18146 543 aa1.84□□□□□ -2.12
CEP290-201ENST00000309041 PURAQ00577 322 aaKnown RBP1.84□□□□□ -2.12
CEP290-201ENST00000309041 A0A0U1RQG5 324 aaPredicted RBP1.84□□□□□ -2.12
CEP290-201ENST00000309041 PLEKHG3A1L390 1219 aa1.84□□□□□ -2.12
CEP290-201ENST00000309041 SUZ12Q15022 739 aaKnown RBP1.84□□□□□ -2.12
CEP290-201ENST00000309041 GPKOWQ92917 476 aaPredicted RBP eCLIP1.84□□□□□ -2.122e-6■■■■□ 25.2
CEP290-201ENST00000309041 CCDC194A0A1B0GVG4 234 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 PIK3R2O00459 728 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 PLIN1O60240 522 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms