RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ASXL2Q76L83 1435 aa20.17■□□□□ 0.82
SMG8-201ENST00000300917 SCAPERQ9BY12 1400 aa20.16■□□□□ 0.82
SMG8-201ENST00000300917 SPATA31E1Q6ZUB1 1445 aa20.16■□□□□ 0.82
SMG8-201ENST00000300917 CNTLNQ9NXG0 1405 aa20.16■□□□□ 0.82
SMG8-201ENST00000300917 FANCAO15360 1455 aa20.15■□□□□ 0.82
SMG8-201ENST00000300917 ROCK2O75116 1388 aaKnown RBP20.14■□□□□ 0.81
SMG8-201ENST00000300917 PRKRIP1Q9H875 184 aaPredicted RBP20.14■□□□□ 0.81
SMG8-201ENST00000300917 MRS2Q9HD23 443 aa20.14■□□□□ 0.81
SMG8-201ENST00000300917 SUPT16HQ9Y5B9 1047 aaKnown RBP20.13■□□□□ 0.81
SMG8-201ENST00000300917 PLA2R1Q13018 1463 aa20.12■□□□□ 0.81
SMG8-201ENST00000300917 ABCC1P33527 1531 aa20.12■□□□□ 0.81
SMG8-201ENST00000300917 KDM5DQ9BY66 1539 aa20.11■□□□□ 0.81
SMG8-201ENST00000300917 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
SMG8-201ENST00000300917 DUOX2Q9NRD8 1548 aa20.09■□□□□ 0.81
SMG8-201ENST00000300917 ADGRL1O94910 1474 aa20.08■□□□□ 0.81
SMG8-201ENST00000300917 FKBP8Q14318 412 aa20.07■□□□□ 0.8
SMG8-201ENST00000300917 MAST1Q9Y2H9 1570 aa20.05■□□□□ 0.8
SMG8-201ENST00000300917 GGT6Q6P531 493 aa20.04■□□□□ 0.8
SMG8-201ENST00000300917 ERBINQ96RT1 1412 aa20.04■□□□□ 0.8
SMG8-201ENST00000300917 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
SMG8-201ENST00000300917 RAPGEF3O95398 923 aa20.03■□□□□ 0.8
SMG8-201ENST00000300917 BCORL1Q5H9F3 1711 aa20.02■□□□□ 0.8
SMG8-201ENST00000300917 CHGAP10645 457 aaKnown RBP20.02■□□□□ 0.8
SMG8-201ENST00000300917 PLXNC1O60486 1568 aa20.02■□□□□ 0.8
SMG8-201ENST00000300917 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.8
SMG8-201ENST00000300917 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.79
SMG8-201ENST00000300917 A2MP01023 1474 aa20.01■□□□□ 0.79
SMG8-201ENST00000300917 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
SMG8-201ENST00000300917 UNC13BO14795 1591 aa20■□□□□ 0.79
SMG8-201ENST00000300917 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
SMG8-201ENST00000300917 ZFYVE16Q7Z3T8 1539 aa19.99■□□□□ 0.79
SMG8-201ENST00000300917 PRAG1Q86YV5 1406 aa19.99■□□□□ 0.79
SMG8-201ENST00000300917 KDM5CP41229 1560 aa19.98■□□□□ 0.79
SMG8-201ENST00000300917 ATP7AQ04656 1500 aa19.96■□□□□ 0.79
SMG8-201ENST00000300917 KANK1Q14678 1352 aa19.96■□□□□ 0.79
SMG8-201ENST00000300917 IQGAP3Q86VI3 1631 aa19.95■□□□□ 0.78
SMG8-201ENST00000300917 NEFLP07196 543 aa19.94■□□□□ 0.78
SMG8-201ENST00000300917 DHX29Q7Z478 1369 aaKnown RBP19.94■□□□□ 0.78
SMG8-201ENST00000300917 RTEL1-TNFRSF6BF6WH68 1400 aa19.94■□□□□ 0.78
SMG8-201ENST00000300917 ABCA9Q8IUA7 1624 aa19.93■□□□□ 0.78
SMG8-201ENST00000300917 CC2D1BQ5T0F9 858 aaKnown RBP19.89■□□□□ 0.78
SMG8-201ENST00000300917 TMC1Q8TDI8 760 aa19.89■□□□□ 0.78
SMG8-201ENST00000300917 NUTM2DQ5VT03 806 aaPredicted RBP19.89■□□□□ 0.77
SMG8-201ENST00000300917 ATP10AO60312 1499 aa19.89■□□□□ 0.77
SMG8-201ENST00000300917 MAGI2Q86UL8 1455 aa19.89■□□□□ 0.77
SMG8-201ENST00000300917 MYT1Q01538 1121 aa19.88■□□□□ 0.77
SMG8-201ENST00000300917 ARAP3Q8WWN8 1544 aa19.88■□□□□ 0.77
SMG8-201ENST00000300917 UGGT1Q9NYU2 1555 aa19.88■□□□□ 0.77
SMG8-201ENST00000300917 SALL2Q9Y467 1007 aaPredicted RBP19.87■□□□□ 0.77
SMG8-201ENST00000300917 DISP3Q9P2K9 1392 aa19.87■□□□□ 0.77
SMG8-201ENST00000300917 E9PCH4 1651 aa19.86■□□□□ 0.77
SMG8-201ENST00000300917 TESK2Q96S53 571 aa19.86■□□□□ 0.77
SMG8-201ENST00000300917 CFAP70Q5T0N1 1121 aa19.85■□□□□ 0.77
SMG8-201ENST00000300917 WASHC2CQ9Y4E1 1318 aa19.85■□□□□ 0.77
SMG8-201ENST00000300917 PANK3Q9H999 370 aa19.84■□□□□ 0.77
SMG8-201ENST00000300917 ZNF518AQ6AHZ1 1483 aa19.83■□□□□ 0.77
SMG8-201ENST00000300917 FAM69CQ0P6D2 419 aa19.83■□□□□ 0.76
SMG8-201ENST00000300917 INO80Q9ULG1 1556 aaPredicted RBP19.83■□□□□ 0.76
SMG8-201ENST00000300917 ARID4BQ4LE39 1312 aaPredicted RBP19.82■□□□□ 0.76
SMG8-201ENST00000300917 ADGRF5Q8IZF2 1346 aa19.82■□□□□ 0.76
SMG8-201ENST00000300917 TMF1P82094 1093 aa19.82■□□□□ 0.76
SMG8-201ENST00000300917 CFAP65Q6ZU64 1925 aaKnown RBP19.82■□□□□ 0.76
SMG8-201ENST00000300917 TRPM1Q7Z4N2 1603 aa19.82■□□□□ 0.76
SMG8-201ENST00000300917 POGZQ7Z3K3 1410 aa19.79■□□□□ 0.76
SMG8-201ENST00000300917 KIDINS220Q9ULH0 1771 aa19.79■□□□□ 0.76
SMG8-201ENST00000300917 CLTCL1P53675 1640 aa19.78■□□□□ 0.76
SMG8-201ENST00000300917 GPRASP1Q5JY77 1395 aa19.77■□□□□ 0.76
SMG8-201ENST00000300917 POLR1AO95602 1720 aaPredicted RBP19.76■□□□□ 0.75
SMG8-201ENST00000300917 PTPRTO14522 1441 aa19.76■□□□□ 0.75
SMG8-201ENST00000300917 TRPM2O94759 1503 aa19.75■□□□□ 0.75
SMG8-201ENST00000300917 PNISRQ8TF01 805 aaKnown RBP19.74■□□□□ 0.75
SMG8-201ENST00000300917 TMEM132EQ6IEE7 984 aa19.74■□□□□ 0.75
SMG8-201ENST00000300917 PRDM15P57071 1507 aaPredicted RBP19.74■□□□□ 0.75
SMG8-201ENST00000300917 MYBBP1AQ9BQG0 1328 aaKnown RBP19.72■□□□□ 0.75
SMG8-201ENST00000300917 PER1O15534 1290 aaPredicted RBP19.72■□□□□ 0.75
SMG8-201ENST00000300917 MLECQ14165 292 aa19.72■□□□□ 0.75
SMG8-201ENST00000300917 TRAK1Q9UPV9 953 aa19.72■□□□□ 0.75
SMG8-201ENST00000300917 KTN1Q86UP2 1357 aaKnown RBP19.72■□□□□ 0.75
SMG8-201ENST00000300917 MROH1Q8NDA8 1641 aa19.72■□□□□ 0.75
SMG8-201ENST00000300917 SPHKAPQ2M3C7 1700 aa19.72■□□□□ 0.75
SMG8-201ENST00000300917 ZBED9Q6R2W3 1325 aa19.72■□□□□ 0.75
SMG8-201ENST00000300917 TET3O43151 1660 aa19.71■□□□□ 0.75
SMG8-201ENST00000300917 YEATS2Q9ULM3 1422 aa19.71■□□□□ 0.75
SMG8-201ENST00000300917 RALBP1Q15311 655 aa19.7■□□□□ 0.74
SMG8-201ENST00000300917 DEPDC5O75140 1603 aa19.7■□□□□ 0.74
SMG8-201ENST00000300917 COL17A1Q9UMD9 1497 aaPredicted RBP19.69■□□□□ 0.74
SMG8-201ENST00000300917 NPATQ14207 1427 aa19.69■□□□□ 0.74
SMG8-201ENST00000300917 NOS1P29475 1434 aa19.68■□□□□ 0.74
SMG8-201ENST00000300917 SAFB2Q14151 953 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMG8-201ENST00000300917 CEP152O94986 1710 aa19.67■□□□□ 0.74
SMG8-201ENST00000300917 KNSTRNQ9Y448 316 aa19.66■□□□□ 0.74
SMG8-201ENST00000300917 VWDEQ8N2E2 1590 aa19.66■□□□□ 0.74
SMG8-201ENST00000300917 EIF2AK4Q9P2K8 1649 aaKnown RBP19.66■□□□□ 0.74
SMG8-201ENST00000300917 PPRC1Q5VV67 1664 aaKnown RBP19.66■□□□□ 0.74
SMG8-201ENST00000300917 MLH3Q9UHC1 1453 aa19.66■□□□□ 0.74
SMG8-201ENST00000300917 FRMPD1Q5SYB0 1578 aa19.66■□□□□ 0.74
SMG8-201ENST00000300917 MADDQ8WXG6 1647 aa19.66■□□□□ 0.74
SMG8-201ENST00000300917 NLRP13Q86W25 1043 aa19.65■□□□□ 0.74
SMG8-201ENST00000300917 EFCAB6Q5THR3 1501 aa19.65■□□□□ 0.74
SMG8-201ENST00000300917 HECW2Q9P2P5 1572 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 346.5 ms