RNA–Protein interactions for RNA: ENST00000298784.5

FAM35A-201, Transcript of Protein FAM35A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM35A, Length 3,402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM35A-201ENST00000298784 PLXNC1O60486 1568 aa9.79□□□□□ -0.84
FAM35A-201ENST00000298784 ROBO1Q9Y6N7 1651 aa9.78□□□□□ -0.84
FAM35A-201ENST00000298784 CDK11AQ9UQ88 783 aaPredicted RBP9.78□□□□□ -0.84
FAM35A-201ENST00000298784 PHLPP1O60346 1717 aa9.78□□□□□ -0.84
FAM35A-201ENST00000298784 NWD1Q149M9 1564 aa9.78□□□□□ -0.84
FAM35A-201ENST00000298784 MEX3CQ5U5Q3 659 aaKnown RBP9.78□□□□□ -0.84
FAM35A-201ENST00000298784 TRIM52Q96A61 297 aa9.78□□□□□ -0.84
FAM35A-201ENST00000298784 STRCP1A6NGW2 1772 aa9.77□□□□□ -0.85
FAM35A-201ENST00000298784 SETBP1Q9Y6X0 1596 aa9.76□□□□□ -0.85
FAM35A-201ENST00000298784 PZPP20742 1482 aa9.76□□□□□ -0.85
FAM35A-201ENST00000298784 PRXQ9BXM0 1461 aa9.76□□□□□ -0.85
FAM35A-201ENST00000298784 CLIP1P30622 1438 aa9.76□□□□□ -0.85
FAM35A-201ENST00000298784 ZC3H13Q5T200 1668 aaKnown RBP9.75□□□□□ -0.85
FAM35A-201ENST00000298784 ARID3CA6NKF2 412 aa9.75□□□□□ -0.85
FAM35A-201ENST00000298784 UGGT1Q9NYU2 1555 aa9.75□□□□□ -0.85
FAM35A-201ENST00000298784 RBM6P78332 1123 aaKnown RBP9.75□□□□□ -0.85
FAM35A-201ENST00000298784 AFAP1Q8N556 730 aa9.74□□□□□ -0.85
FAM35A-201ENST00000298784 NGLY1Q96IV0 654 aa9.74□□□□□ -0.85
FAM35A-201ENST00000298784 XIRP1Q702N8 1843 aaKnown RBP9.73□□□□□ -0.85
FAM35A-201ENST00000298784 COL16A1Q07092 1604 aaPredicted RBP9.73□□□□□ -0.85
FAM35A-201ENST00000298784 A2MP01023 1474 aa9.72□□□□□ -0.85
FAM35A-201ENST00000298784 ADGBQ8N7X0 1667 aa9.72□□□□□ -0.85
FAM35A-201ENST00000298784 AHDC1Q5TGY3 1603 aaPredicted RBP9.72□□□□□ -0.85
FAM35A-201ENST00000298784 NCOA3Q9Y6Q9 1424 aa9.72□□□□□ -0.85
FAM35A-201ENST00000298784 NKTRP30414 1462 aaKnown RBP9.71□□□□□ -0.85
FAM35A-201ENST00000298784 PLEKHH2Q8IVE3 1493 aa9.71□□□□□ -0.85
FAM35A-201ENST00000298784 PREX2Q70Z35 1606 aa9.71□□□□□ -0.85
FAM35A-201ENST00000298784 RGS12O14924 1447 aa9.71□□□□□ -0.85
FAM35A-201ENST00000298784 SAMD9LQ8IVG5 1584 aa9.71□□□□□ -0.86
FAM35A-201ENST00000298784 MIA2Q96PC5 1412 aa9.7□□□□□ -0.86
FAM35A-201ENST00000298784 LRP6O75581 1613 aa9.7□□□□□ -0.86
FAM35A-201ENST00000298784 TROQ12816 1431 aaPredicted RBP9.7□□□□□ -0.86
FAM35A-201ENST00000298784 INO80Q9ULG1 1556 aaPredicted RBP9.68□□□□□ -0.86
FAM35A-201ENST00000298784 SCAF11Q99590 1463 aaKnown RBP9.68□□□□□ -0.86
FAM35A-201ENST00000298784 YY1P25490 414 aa9.68□□□□□ -0.86
FAM35A-201ENST00000298784 MSH6P52701 1360 aa9.67□□□□□ -0.86
FAM35A-201ENST00000298784 TIAM1Q13009 1591 aa9.66□□□□□ -0.86
FAM35A-201ENST00000298784 DCAF8L1A6NGE4 600 aa9.66□□□□□ -0.86
FAM35A-201ENST00000298784 NUTM2BA6NNL0 878 aaPredicted RBP9.66□□□□□ -0.86
FAM35A-201ENST00000298784 NUTM2EB1AL46 878 aaPredicted RBP9.66□□□□□ -0.86
FAM35A-201ENST00000298784 NUTM2DQ5VT03 806 aaPredicted RBP9.66□□□□□ -0.86
FAM35A-201ENST00000298784 NUTM2AQ8IVF1 878 aaPredicted RBP9.66□□□□□ -0.86
FAM35A-201ENST00000298784 SLIT1O75093 1534 aa9.66□□□□□ -0.86
FAM35A-201ENST00000298784 KIAA1107Q9UPP5 1409 aa9.66□□□□□ -0.86
FAM35A-201ENST00000298784 CDC42BPBQ9Y5S2 1711 aa9.66□□□□□ -0.86
FAM35A-201ENST00000298784 MAP3K1Q13233 1512 aa9.66□□□□□ -0.86
FAM35A-201ENST00000298784 ARHGAP23Q9P227 1491 aa9.66□□□□□ -0.86
FAM35A-201ENST00000298784 SPAG9O60271 1321 aaKnown RBP9.65□□□□□ -0.86
FAM35A-201ENST00000298784 SENP3Q9H4L4 574 aaPredicted RBP9.65□□□□□ -0.86
FAM35A-201ENST00000298784 PRDM15P57071 1507 aaPredicted RBP9.65□□□□□ -0.86
FAM35A-201ENST00000298784 KCNA6P17658 529 aa9.64□□□□□ -0.87
FAM35A-201ENST00000298784 RTEL1-TNFRSF6BF6WH68 1400 aa9.64□□□□□ -0.87
FAM35A-201ENST00000298784 UNC13BO14795 1591 aa9.64□□□□□ -0.87
FAM35A-201ENST00000298784 TMEM94Q12767 1356 aa9.63□□□□□ -0.87
FAM35A-201ENST00000298784 AFF2P51816 1311 aa9.63□□□□□ -0.87
FAM35A-201ENST00000298784 P3H3Q8IVL6 736 aa9.63□□□□□ -0.87
FAM35A-201ENST00000298784 BLMP54132 1417 aaPredicted RBP9.63□□□□□ -0.87
FAM35A-201ENST00000298784 CAMSAP2Q08AD1 1489 aa9.62□□□□□ -0.87
FAM35A-201ENST00000298784 KDM5AP29375 1690 aaKnown RBP9.62□□□□□ -0.87
FAM35A-201ENST00000298784 MROH1Q8NDA8 1641 aa9.61□□□□□ -0.87
FAM35A-201ENST00000298784 SLAIN2Q9P270 581 aa9.61□□□□□ -0.87
FAM35A-201ENST00000298784 PCDH10Q9P2E7 1040 aa9.6□□□□□ -0.87
FAM35A-201ENST00000298784 DIP2AQ14689 1571 aa9.6□□□□□ -0.87
FAM35A-201ENST00000298784 FMN1Q68DA7 1419 aa9.6□□□□□ -0.87
FAM35A-201ENST00000298784 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
FAM35A-201ENST00000298784 EID1Q9Y6B2 187 aa9.6□□□□□ -0.87
FAM35A-201ENST00000298784 SPHKAPQ2M3C7 1700 aa9.59□□□□□ -0.87
FAM35A-201ENST00000298784 SETD5Q9C0A6 1442 aa9.59□□□□□ -0.87
FAM35A-201ENST00000298784 GGT6Q6P531 493 aa9.58□□□□□ -0.88
FAM35A-201ENST00000298784 UBR1Q8IWV7 1749 aa9.58□□□□□ -0.88
FAM35A-201ENST00000298784 DHX29Q7Z478 1369 aaKnown RBP9.57□□□□□ -0.88
FAM35A-201ENST00000298784 SENP3-EIF4A1A0A087X0R7 540 aa9.57□□□□□ -0.88
FAM35A-201ENST00000298784 PROSER2Q86WR7 435 aaPredicted RBP9.57□□□□□ -0.88
FAM35A-201ENST00000298784 TRPC5Q9UL62 973 aaPredicted RBP9.57□□□□□ -0.88
FAM35A-201ENST00000298784 SF3B2Q13435 895 aaKnown RBP9.56□□□□□ -0.88
FAM35A-201ENST00000298784 PTCH1Q13635 1447 aa9.55□□□□□ -0.88
FAM35A-201ENST00000298784 GPATCH8Q9UKJ3 1502 aaKnown RBP9.54□□□□□ -0.88
FAM35A-201ENST00000298784 CCDC18Q5T9S5 1454 aa9.54□□□□□ -0.88
FAM35A-201ENST00000298784 ATRNO75882 1429 aa9.54□□□□□ -0.88
FAM35A-201ENST00000298784 ERVK-7P63135 1459 aa9.53□□□□□ -0.88
FAM35A-201ENST00000298784 BCL9LQ86UU0 1499 aa9.53□□□□□ -0.88
FAM35A-201ENST00000298784 SYCP2Q9BX26 1530 aa9.53□□□□□ -0.88
FAM35A-201ENST00000298784 CADPS2Q86UW7 1296 aa9.53□□□□□ -0.88
FAM35A-201ENST00000298784 DCCP43146 1447 aa9.53□□□□□ -0.88
FAM35A-201ENST00000298784 NCOA2Q15596 1464 aa9.52□□□□□ -0.88
FAM35A-201ENST00000298784 CDC42BPAQ5VT25 1732 aa9.52□□□□□ -0.88
FAM35A-201ENST00000298784 TXNDC2Q86VQ3 553 aa9.52□□□□□ -0.89
FAM35A-201ENST00000298784 NINLQ9Y2I6 1382 aa9.52□□□□□ -0.89
FAM35A-201ENST00000298784 HRCP23327 699 aa9.52□□□□□ -0.89
FAM35A-201ENST00000298784 C1QTNF8P60827 252 aa9.51□□□□□ -0.89
FAM35A-201ENST00000298784 LRRC59Q96AG4 307 aaKnown RBP9.51□□□□□ -0.89
FAM35A-201ENST00000298784 WASHC2CQ9Y4E1 1318 aa9.51□□□□□ -0.89
FAM35A-201ENST00000298784 RALGAPBQ86X10 1494 aa9.51□□□□□ -0.89
FAM35A-201ENST00000298784 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
FAM35A-201ENST00000298784 TET3O43151 1660 aa9.49□□□□□ -0.89
FAM35A-201ENST00000298784 SLC34A2O95436 690 aa9.49□□□□□ -0.89
FAM35A-201ENST00000298784 ARHGAP35Q9NRY4 1499 aa9.49□□□□□ -0.89
FAM35A-201ENST00000298784 TMEM2Q9UHN6 1383 aa9.48□□□□□ -0.89
FAM35A-201ENST00000298784 RPRD2Q5VT52 1461 aaKnown RBP9.47□□□□□ -0.89
FAM35A-201ENST00000298784 ARHGAP31Q2M1Z3 1444 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms