RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 TAF7LQ5H9L4 462 aa19.36■□□□□ 0.69
FNDC1-201ENST00000297267 FHAD1B1AJZ9 1412 aa19.36■□□□□ 0.69
FNDC1-201ENST00000297267 COG6Q9Y2V7 657 aa19.35■□□□□ 0.69
FNDC1-201ENST00000297267 FBXO3Q9UK99 471 aa19.35■□□□□ 0.69
FNDC1-201ENST00000297267 CENPJQ9HC77 1338 aaPredicted RBP19.34■□□□□ 0.69
FNDC1-201ENST00000297267 IPO8O15397 1037 aaKnown RBP19.33■□□□□ 0.69
FNDC1-201ENST00000297267 NOC3LQ8WTT2 800 aaKnown RBP19.33■□□□□ 0.68
FNDC1-201ENST00000297267 EIF2S2P20042 333 aaKnown RBP19.31■□□□□ 0.68
FNDC1-201ENST00000297267 CHMP4BQ9H444 224 aaKnown RBP19.31■□□□□ 0.68
FNDC1-201ENST00000297267 VPS53Q5VIR6 699 aa19.3■□□□□ 0.68
FNDC1-201ENST00000297267 NGDNQ8NEJ9 315 aaKnown RBP19.3■□□□□ 0.68
FNDC1-201ENST00000297267 PMFBP1Q8TBY8 1022 aa19.3■□□□□ 0.68
FNDC1-201ENST00000297267 AMPHP49418 695 aa19.3■□□□□ 0.68
FNDC1-201ENST00000297267 PES1O00541 588 aaKnown RBP19.29■□□□□ 0.68
FNDC1-201ENST00000297267 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
FNDC1-201ENST00000297267 RALBP1Q15311 655 aa19.29■□□□□ 0.68
FNDC1-201ENST00000297267 RAD21O60216 631 aa19.29■□□□□ 0.68
FNDC1-201ENST00000297267 PDE4AP27815 886 aa19.28■□□□□ 0.68
FNDC1-201ENST00000297267 RASSF8Q8NHQ8 419 aa19.28■□□□□ 0.68
FNDC1-201ENST00000297267 STK31Q9BXU1 1019 aa19.28■□□□□ 0.68
FNDC1-201ENST00000297267 KIAA2012Q0VF49 1180 aa19.27■□□□□ 0.68
FNDC1-201ENST00000297267 NUTM2GQ5VZR2 741 aa19.27■□□□□ 0.67
FNDC1-201ENST00000297267 NRDCO43847 1150 aa19.26■□□□□ 0.67
FNDC1-201ENST00000297267 MINK1Q8N4C8 1332 aaPredicted RBP19.26■□□□□ 0.67
FNDC1-201ENST00000297267 CALD1Q05682 793 aaKnown RBP19.26■□□□□ 0.67
FNDC1-201ENST00000297267 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
FNDC1-201ENST00000297267 ZNF592Q92610 1267 aa19.25■□□□□ 0.67
FNDC1-201ENST00000297267 PRM3Q9NNZ6 103 aa19.25■□□□□ 0.67
FNDC1-201ENST00000297267 CCAR2Q8N163 923 aaKnown RBP19.23■□□□□ 0.67
FNDC1-201ENST00000297267 SPAG9O60271 1321 aaKnown RBP19.23■□□□□ 0.67
FNDC1-201ENST00000297267 WASHC2CQ9Y4E1 1318 aa19.22■□□□□ 0.67
FNDC1-201ENST00000297267 APAF1O14727 1248 aa19.22■□□□□ 0.67
FNDC1-201ENST00000297267 FRAT2O75474 233 aaPredicted RBP19.22■□□□□ 0.67
FNDC1-201ENST00000297267 RRP1P56182 461 aaKnown RBP19.21■□□□□ 0.67
FNDC1-201ENST00000297267 HMOX1P09601 288 aa19.21■□□□□ 0.67
FNDC1-201ENST00000297267 MCTP1Q6DN14 999 aa19.21■□□□□ 0.67
FNDC1-201ENST00000297267 PATL2C9JE40 543 aaKnown RBP19.2■□□□□ 0.66
FNDC1-201ENST00000297267 NACADO15069 1562 aa19.19■□□□□ 0.66
FNDC1-201ENST00000297267 DHX57Q6P158 1386 aaKnown RBP19.18■□□□□ 0.66
FNDC1-201ENST00000297267 G3V3G9 751 aa19.17■□□□□ 0.66
FNDC1-201ENST00000297267 DCAF8Q5TAQ9 597 aa19.17■□□□□ 0.66
FNDC1-201ENST00000297267 SAMD1Q6SPF0 538 aaPredicted RBP19.17■□□□□ 0.66
FNDC1-201ENST00000297267 A0A0U1RQG5 324 aaPredicted RBP19.16■□□□□ 0.66
FNDC1-201ENST00000297267 H3BQV1 296 aa19.16■□□□□ 0.66
FNDC1-201ENST00000297267 IFFO2Q5TF58 517 aa19.16■□□□□ 0.66
FNDC1-201ENST00000297267 PRDM2Q13029 1718 aa19.16■□□□□ 0.66
FNDC1-201ENST00000297267 ANKRD30AQ9BXX3 1397 aa19.16■□□□□ 0.66
FNDC1-201ENST00000297267 C11orf95C9JLR9 678 aaPredicted RBP19.16■□□□□ 0.66
FNDC1-201ENST00000297267 GPATCH3Q96I76 525 aa19.16■□□□□ 0.66
FNDC1-201ENST00000297267 SYTL4Q96C24 671 aaPredicted RBP19.16■□□□□ 0.66
FNDC1-201ENST00000297267 PANK1Q8TE04 598 aa19.16■□□□□ 0.66
FNDC1-201ENST00000297267 DDX49Q9Y6V7 483 aaKnown RBP19.16■□□□□ 0.66
FNDC1-201ENST00000297267 MYBBP1AQ9BQG0 1328 aaKnown RBP19.15■□□□□ 0.66
FNDC1-201ENST00000297267 MSH5O43196 834 aa19.13■□□□□ 0.65
FNDC1-201ENST00000297267 MTMR7Q9Y216 660 aa19.13■□□□□ 0.65
FNDC1-201ENST00000297267 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
FNDC1-201ENST00000297267 KIF16BQ96L93 1317 aa19.13■□□□□ 0.65
FNDC1-201ENST00000297267 SF3A1Q15459 793 aaKnown RBP19.13■□□□□ 0.65
FNDC1-201ENST00000297267 ZNF644Q9H582 1327 aaPredicted RBP19.13■□□□□ 0.65
FNDC1-201ENST00000297267 KIF15Q9NS87 1388 aa19.13■□□□□ 0.65
FNDC1-201ENST00000297267 HDGFP51858 240 aaKnown RBP19.13■□□□□ 0.65
FNDC1-201ENST00000297267 NLRP13Q86W25 1043 aa19.11■□□□□ 0.65
FNDC1-201ENST00000297267 C1orf115Q9H7X2 142 aa19.11■□□□□ 0.65
FNDC1-201ENST00000297267 FAM161AQ3B820 660 aa19.11■□□□□ 0.65
FNDC1-201ENST00000297267 ANO2Q9NQ90 1003 aa19.11■□□□□ 0.65
FNDC1-201ENST00000297267 VSIG10Q8N0Z9 540 aa19.1■□□□□ 0.65
FNDC1-201ENST00000297267 TERF2IPQ9NYB0 399 aa19.1■□□□□ 0.65
FNDC1-201ENST00000297267 SYAP1Q96A49 352 aaPredicted RBP19.1■□□□□ 0.65
FNDC1-201ENST00000297267 FYB1O15117 783 aa19.1■□□□□ 0.65
FNDC1-201ENST00000297267 GSE1Q14687 1217 aa19.1■□□□□ 0.65
FNDC1-201ENST00000297267 EIF3AQ14152 1382 aaKnown RBP19.09■□□□□ 0.65
FNDC1-201ENST00000297267 TNNT3P45378 269 aaPredicted RBP19.09■□□□□ 0.65
FNDC1-201ENST00000297267 STK11IPQ8N1F8 1099 aa19.09■□□□□ 0.65
FNDC1-201ENST00000297267 MPNDQ8N594 471 aa19.09■□□□□ 0.65
FNDC1-201ENST00000297267 PRKRIP1Q9H875 184 aaPredicted RBP19.09■□□□□ 0.65
FNDC1-201ENST00000297267 ST18O60284 1047 aa19.09■□□□□ 0.65
FNDC1-201ENST00000297267 AIMP1Q12904 312 aaKnown RBP19.09■□□□□ 0.65
FNDC1-201ENST00000297267 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
FNDC1-201ENST00000297267 CDCA7LQ96GN5 454 aa19.09■□□□□ 0.65
FNDC1-201ENST00000297267 LNPKQ9C0E8 428 aa19.08■□□□□ 0.65
FNDC1-201ENST00000297267 USP47Q96K76 1375 aa19.08■□□□□ 0.65
FNDC1-201ENST00000297267 MARCH6O60337 910 aa19.08■□□□□ 0.64
FNDC1-201ENST00000297267 TPM4P67936 248 aa19.08■□□□□ 0.64
FNDC1-201ENST00000297267 FAM184AQ8NB25 1140 aa19.07■□□□□ 0.64
FNDC1-201ENST00000297267 RIPK4P57078 832 aa19.07■□□□□ 0.64
FNDC1-201ENST00000297267 HSP90AA2PQ14568 343 aaPredicted RBP19.07■□□□□ 0.64
FNDC1-201ENST00000297267 TPD52L1Q16890 204 aaPredicted RBP19.06■□□□□ 0.64
FNDC1-201ENST00000297267 HMMRO75330 724 aa19.06■□□□□ 0.64
FNDC1-201ENST00000297267 CABP2Q9NPB3 220 aa19.06■□□□□ 0.64
FNDC1-201ENST00000297267 TMEM132EQ6IEE7 984 aa19.06■□□□□ 0.64
FNDC1-201ENST00000297267 CCDC27Q2M243 656 aa19.05■□□□□ 0.64
FNDC1-201ENST00000297267 FAM177BA6PVY3 158 aa19.05■□□□□ 0.64
FNDC1-201ENST00000297267 APPP05067 770 aa19.05■□□□□ 0.64
FNDC1-201ENST00000297267 EFCAB2Q5VUJ9 269 aa19.05■□□□□ 0.64
FNDC1-201ENST00000297267 CENPQQ7L2Z9 268 aaPredicted RBP19.05■□□□□ 0.64
FNDC1-201ENST00000297267 SKAP1Q86WV1 359 aa19.05■□□□□ 0.64
FNDC1-201ENST00000297267 MAP4K4O95819 1239 aaPredicted RBP19.05■□□□□ 0.64
FNDC1-201ENST00000297267 FAM13BQ9NYF5 915 aa19.05■□□□□ 0.64
FNDC1-201ENST00000297267 EVA1CP58658 441 aa19.04■□□□□ 0.64
FNDC1-201ENST00000297267 CARMIL2Q6F5E8 1435 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms