RNA–Protein interactions for RNA: ENST00000289893.8

MACF1-201, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5 BASIC

Gene MACF1, Length 19,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-201ENST00000289893 CFDP1Q9UEE9 299 aaPredicted RBP4.4□□□□□ -1.71
MACF1-201ENST00000289893 GPS2Q13227 327 aa4.4□□□□□ -1.71
MACF1-201ENST00000289893 NEFHP12036 1026 aa4.4□□□□□ -1.71
MACF1-201ENST00000289893 TSHZ2Q9NRE2 1034 aa4.4□□□□□ -1.71
MACF1-201ENST00000289893 TPD52L1Q16890 204 aaPredicted RBP4.4□□□□□ -1.71
MACF1-201ENST00000289893 CCDC34Q96HJ3 373 aa4.4□□□□□ -1.71
MACF1-201ENST00000289893 RTF1Q92541 710 aaKnown RBP4.39□□□□□ -1.71
MACF1-201ENST00000289893 SPAG9O60271 1321 aaKnown RBP4.39□□□□□ -1.71
MACF1-201ENST00000289893 PHF14O94880 888 aa4.39□□□□□ -1.71
MACF1-201ENST00000289893 PDIA4P13667 645 aaKnown RBP4.39□□□□□ -1.71
MACF1-201ENST00000289893 KIF16BQ96L93 1317 aa4.39□□□□□ -1.71
MACF1-201ENST00000289893 VPS53Q5VIR6 699 aa4.39□□□□□ -1.71
MACF1-201ENST00000289893 RWDD1Q9H446 243 aaPredicted RBP4.39□□□□□ -1.71
MACF1-201ENST00000289893 TPM2P07951 284 aa4.39□□□□□ -1.71
MACF1-201ENST00000289893 IPO9Q96P70 1041 aaKnown RBP4.38□□□□□ -1.71
MACF1-201ENST00000289893 HDGFP51858 240 aaKnown RBP4.38□□□□□ -1.71
MACF1-201ENST00000289893 CARMIL2Q6F5E8 1435 aa4.38□□□□□ -1.71
MACF1-201ENST00000289893 DCAF11Q8TEB1 546 aa4.38□□□□□ -1.71
MACF1-201ENST00000289893 TOMM22Q9NS69 142 aa4.38□□□□□ -1.71
MACF1-201ENST00000289893 RCAN3Q9UKA8 241 aa4.38□□□□□ -1.71
MACF1-201ENST00000289893 SETD5Q9C0A6 1442 aa4.38□□□□□ -1.71
MACF1-201ENST00000289893 CWC15Q9P013 229 aaKnown RBP4.38□□□□□ -1.71
MACF1-201ENST00000289893 GSE1Q14687 1217 aa4.38□□□□□ -1.71
MACF1-201ENST00000289893 FAM13BQ9NYF5 915 aa4.38□□□□□ -1.71
MACF1-201ENST00000289893 IPO8O15397 1037 aaKnown RBP4.38□□□□□ -1.71
MACF1-201ENST00000289893 TMF1P82094 1093 aa4.38□□□□□ -1.71
MACF1-201ENST00000289893 FOXD4L6Q3SYB3 417 aaPredicted RBP4.38□□□□□ -1.71
MACF1-201ENST00000289893 FOXD4L3Q6VB84 417 aaPredicted RBP4.38□□□□□ -1.71
MACF1-201ENST00000289893 SUPT6HQ7KZ85 1726 aaKnown RBP4.38□□□□□ -1.71
MACF1-201ENST00000289893 CCER2I3L3R5 266 aa4.38□□□□□ -1.71
MACF1-201ENST00000289893 CSPP1Q1MSJ5 1256 aa4.38□□□□□ -1.71
MACF1-201ENST00000289893 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.38□□□□□ -1.71
MACF1-201ENST00000289893 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.37□□□□□ -1.71
MACF1-201ENST00000289893 GPATCH3Q96I76 525 aa4.37□□□□□ -1.71
MACF1-201ENST00000289893 MLECQ14165 292 aa4.37□□□□□ -1.71
MACF1-201ENST00000289893 ZNF592Q92610 1267 aa4.37□□□□□ -1.71
MACF1-201ENST00000289893 EIF3AQ14152 1382 aaKnown RBP4.37□□□□□ -1.71
MACF1-201ENST00000289893 SF3A1Q15459 793 aaKnown RBP4.37□□□□□ -1.71
MACF1-201ENST00000289893 EFCAB2Q5VUJ9 269 aa4.37□□□□□ -1.71
MACF1-201ENST00000289893 CUX2O14529 1486 aa4.37□□□□□ -1.71
MACF1-201ENST00000289893 PRXQ9BXM0 1461 aa4.37□□□□□ -1.71
MACF1-201ENST00000289893 GOLGA6L19H0YKK7 550 aa4.37□□□□□ -1.71
MACF1-201ENST00000289893 TSR1Q2NL82 804 aaKnown RBP4.37□□□□□ -1.71
MACF1-201ENST00000289893 ROCK2O75116 1388 aaKnown RBP4.37□□□□□ -1.71
MACF1-201ENST00000289893 TCERG1O14776 1098 aaKnown RBP4.37□□□□□ -1.71
MACF1-201ENST00000289893 BCL11BQ9C0K0 894 aaPredicted RBP4.37□□□□□ -1.71
MACF1-201ENST00000289893 SMC4Q9NTJ3 1288 aa4.37□□□□□ -1.71
MACF1-201ENST00000289893 CCDC70Q6NSX1 233 aa4.37□□□□□ -1.71
MACF1-201ENST00000289893 KIF21BO75037 1637 aa4.37□□□□□ -1.71
MACF1-201ENST00000289893 DDX11L8A8MPP1 907 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 NGEFQ8N5V2 710 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 PPP6R1Q9UPN7 881 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 FAM43AQ8N2R8 423 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 CLUAP1Q96AJ1 413 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 PCMTD1Q96MG8 357 aaPredicted RBP4.36□□□□□ -1.71
MACF1-201ENST00000289893 FANCIQ9NVI1 1328 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 STK26Q9P289 416 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 U2AF1L5P0DN76 240 aaPredicted RBP4.36□□□□□ -1.71
MACF1-201ENST00000289893 U2AF1Q01081 240 aaKnown RBP eCLIP4.36□□□□□ -1.718e-7■□□□□ 9.5
MACF1-201ENST00000289893 MARCH6O60337 910 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 CSB-PGBD3P0DP91 1061 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 SLC4A10Q6U841 1118 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 CCDC9Q9Y3X0 531 aaKnown RBP4.36□□□□□ -1.71
MACF1-201ENST00000289893 STK31Q9BXU1 1019 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 CCDC18Q5T9S5 1454 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 PMFBP1Q8TBY8 1022 aa4.36□□□□□ -1.71
MACF1-201ENST00000289893 KIF3AQ9Y496 699 aa4.35□□□□□ -1.71
MACF1-201ENST00000289893 PAK3O75914 559 aaPredicted RBP4.35□□□□□ -1.71
MACF1-201ENST00000289893 TSPYL1Q9H0U9 437 aa4.35□□□□□ -1.71
MACF1-201ENST00000289893 HMMRO75330 724 aa4.35□□□□□ -1.71
MACF1-201ENST00000289893 DDX49Q9Y6V7 483 aaKnown RBP4.35□□□□□ -1.71
MACF1-201ENST00000289893 ST18O60284 1047 aa4.35□□□□□ -1.71
MACF1-201ENST00000289893 TPM1P09493 284 aa4.35□□□□□ -1.71
MACF1-201ENST00000289893 KANK4Q5T7N3 995 aaPredicted RBP4.35□□□□□ -1.71
MACF1-201ENST00000289893 H3BQV1 296 aa4.35□□□□□ -1.71
MACF1-201ENST00000289893 IFFO2Q5TF58 517 aa4.35□□□□□ -1.71
MACF1-201ENST00000289893 RDXP35241 583 aaKnown RBP4.35□□□□□ -1.71
MACF1-201ENST00000289893 RRP12Q5JTH9 1297 aaKnown RBP4.35□□□□□ -1.71
MACF1-201ENST00000289893 MEX3CQ5U5Q3 659 aaKnown RBP4.34□□□□□ -1.71
MACF1-201ENST00000289893 G3V3G9 751 aa4.34□□□□□ -1.71
MACF1-201ENST00000289893 DCAF8Q5TAQ9 597 aa4.34□□□□□ -1.71
MACF1-201ENST00000289893 CUX1P39880 1505 aa4.34□□□□□ -1.71
MACF1-201ENST00000289893 CENPJQ9HC77 1338 aaPredicted RBP4.34□□□□□ -1.71
MACF1-201ENST00000289893 BECN2A8MW95 431 aa4.34□□□□□ -1.71
MACF1-201ENST00000289893 TCEAL9Q9UHQ7 104 aa4.34□□□□□ -1.71
MACF1-201ENST00000289893 HSPA5P11021 654 aaKnown RBP4.34□□□□□ -1.71
MACF1-201ENST00000289893 MCTP1Q6DN14 999 aa4.34□□□□□ -1.71
MACF1-201ENST00000289893 DEF6Q9H4E7 631 aa4.34□□□□□ -1.71
MACF1-201ENST00000289893 HDGFL2Q7Z4V5 671 aaPredicted RBP4.34□□□□□ -1.71
MACF1-201ENST00000289893 CCDC146Q8IYE0 955 aa4.34□□□□□ -1.71
MACF1-201ENST00000289893 ZMYND15Q9H091 742 aa4.34□□□□□ -1.72
MACF1-201ENST00000289893 ANKRD30AQ9BXX3 1397 aa4.34□□□□□ -1.72
MACF1-201ENST00000289893 FANCD2Q9BXW9 1451 aa4.34□□□□□ -1.72
MACF1-201ENST00000289893 RUFY1Q96T51 708 aa4.34□□□□□ -1.72
MACF1-201ENST00000289893 TMX4Q9H1E5 349 aaPredicted RBP4.34□□□□□ -1.72
MACF1-201ENST00000289893 RAB3GAP2Q9H2M9 1393 aa4.33□□□□□ -1.72
MACF1-201ENST00000289893 ZNF526Q8TF50 670 aaPredicted RBP4.33□□□□□ -1.72
MACF1-201ENST00000289893 HOMER1Q86YM7 354 aa4.33□□□□□ -1.72
MACF1-201ENST00000289893 CTTNBP2Q8WZ74 1663 aa4.33□□□□□ -1.72
MACF1-201ENST00000289893 SMARCA4P51532 1647 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms