RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 CD109Q6YHK3 1445 aa25.57■■□□□ 1.68
SMARCC2-201ENST00000267064 TMC1Q8TDI8 760 aa25.57■■□□□ 1.68
SMARCC2-201ENST00000267064 CCDC7Q96M83 1385 aa25.57■■□□□ 1.68
SMARCC2-201ENST00000267064 SAMD9LQ8IVG5 1584 aa25.57■■□□□ 1.68
SMARCC2-201ENST00000267064 PELP1Q8IZL8 1130 aaKnown RBP25.56■■□□□ 1.68
SMARCC2-201ENST00000267064 KDM5BQ9UGL1 1544 aa25.54■■□□□ 1.68
SMARCC2-201ENST00000267064 SHANK2Q9UPX8 1470 aa25.54■■□□□ 1.68
SMARCC2-201ENST00000267064 CLASP1Q7Z460 1538 aa25.54■■□□□ 1.68
SMARCC2-201ENST00000267064 ESF1Q9H501 851 aaKnown RBP25.54■■□□□ 1.68
SMARCC2-201ENST00000267064 FKBP8Q14318 412 aa25.53■■□□□ 1.68
SMARCC2-201ENST00000267064 ADCY10Q96PN6 1610 aa25.52■■□□□ 1.68
SMARCC2-201ENST00000267064 ZCCHC11Q5TAX3 1644 aaKnown RBP25.51■■□□□ 1.67
SMARCC2-201ENST00000267064 CC2D1BQ5T0F9 858 aaKnown RBP25.49■■□□□ 1.67
SMARCC2-201ENST00000267064 ARHGEF12Q9NZN5 1544 aa25.48■■□□□ 1.67
SMARCC2-201ENST00000267064 PRKRIP1Q9H875 184 aaPredicted RBP25.48■■□□□ 1.67
SMARCC2-201ENST00000267064 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
SMARCC2-201ENST00000267064 ARID4BQ4LE39 1312 aaPredicted RBP25.47■■□□□ 1.67
SMARCC2-201ENST00000267064 UHRF1BP1LA0JNW5 1464 aa25.46■■□□□ 1.67
SMARCC2-201ENST00000267064 IRX6P78412 446 aaPredicted RBP25.46■■□□□ 1.67
SMARCC2-201ENST00000267064 FAM135AQ9P2D6 1515 aa25.46■■□□□ 1.67
SMARCC2-201ENST00000267064 CCDC184Q52MB2 194 aa25.45■■□□□ 1.66
SMARCC2-201ENST00000267064 PREX2Q70Z35 1606 aa25.44■■□□□ 1.66
SMARCC2-201ENST00000267064 TMF1P82094 1093 aa25.43■■□□□ 1.66
SMARCC2-201ENST00000267064 ADGBQ8N7X0 1667 aa25.43■■□□□ 1.66
SMARCC2-201ENST00000267064 CDC42BPBQ9Y5S2 1711 aa25.41■■□□□ 1.66
SMARCC2-201ENST00000267064 TEX14Q8IWB6 1497 aa25.41■■□□□ 1.66
SMARCC2-201ENST00000267064 MYO5CQ9NQX4 1742 aa25.4■■□□□ 1.66
SMARCC2-201ENST00000267064 SAFB2Q14151 953 aaKnown RBP eCLIP25.4■■□□□ 1.66
SMARCC2-201ENST00000267064 ARHGEF5Q12774 1597 aa25.39■■□□□ 1.66
SMARCC2-201ENST00000267064 CNTLNQ9NXG0 1405 aa25.39■■□□□ 1.65
SMARCC2-201ENST00000267064 DUOX2Q9NRD8 1548 aa25.37■■□□□ 1.65
SMARCC2-201ENST00000267064 TRHP20396 242 aaPredicted RBP25.37■■□□□ 1.65
SMARCC2-201ENST00000267064 CFAP70Q5T0N1 1121 aa25.35■■□□□ 1.65
SMARCC2-201ENST00000267064 STK26Q9P289 416 aa25.34■■□□□ 1.65
SMARCC2-201ENST00000267064 DHX29Q7Z478 1369 aaKnown RBP25.33■■□□□ 1.65
SMARCC2-201ENST00000267064 TRAK1Q9UPV9 953 aa25.33■■□□□ 1.65
SMARCC2-201ENST00000267064 SUPT16HQ9Y5B9 1047 aaKnown RBP25.32■■□□□ 1.64
SMARCC2-201ENST00000267064 KNSTRNQ9Y448 316 aa25.31■■□□□ 1.64
SMARCC2-201ENST00000267064 ERBINQ96RT1 1412 aa25.31■■□□□ 1.64
SMARCC2-201ENST00000267064 PANK3Q9H999 370 aa25.3■■□□□ 1.64
SMARCC2-201ENST00000267064 TMEM132EQ6IEE7 984 aa25.27■■□□□ 1.64
SMARCC2-201ENST00000267064 CROCC2H7BZ55 1655 aa25.26■■□□□ 1.63
SMARCC2-201ENST00000267064 ABCC1P33527 1531 aa25.26■■□□□ 1.63
SMARCC2-201ENST00000267064 TNNT2P45379 298 aaPredicted RBP25.23■■□□□ 1.63
SMARCC2-201ENST00000267064 CDCA8Q53HL2 280 aa25.23■■□□□ 1.63
SMARCC2-201ENST00000267064 RTEL1-TNFRSF6BF6WH68 1400 aa25.21■■□□□ 1.63
SMARCC2-201ENST00000267064 ATP7AQ04656 1500 aa25.2■■□□□ 1.63
SMARCC2-201ENST00000267064 ZNF518AQ6AHZ1 1483 aa25.2■■□□□ 1.63
SMARCC2-201ENST00000267064 ADGRF5Q8IZF2 1346 aa25.19■■□□□ 1.62
SMARCC2-201ENST00000267064 A2MP01023 1474 aa25.18■■□□□ 1.62
SMARCC2-201ENST00000267064 KTN1Q86UP2 1357 aaKnown RBP25.17■■□□□ 1.62
SMARCC2-201ENST00000267064 PLA2R1Q13018 1463 aa25.17■■□□□ 1.62
SMARCC2-201ENST00000267064 PRAG1Q86YV5 1406 aa25.16■■□□□ 1.62
SMARCC2-201ENST00000267064 POGKQ9P215 609 aa25.14■■□□□ 1.62
SMARCC2-201ENST00000267064 FBXO31Q5XUX0 539 aaPredicted RBP25.14■■□□□ 1.61
SMARCC2-201ENST00000267064 RALGAPBQ86X10 1494 aa25.13■■□□□ 1.61
SMARCC2-201ENST00000267064 WDR43Q15061 677 aaKnown RBP eCLIP25.12■■□□□ 1.619e-6■■■□□ 15.6
SMARCC2-201ENST00000267064 RALBP1Q15311 655 aa25.11■■□□□ 1.61
SMARCC2-201ENST00000267064 SPATA31E1Q6ZUB1 1445 aa25.11■■□□□ 1.61
SMARCC2-201ENST00000267064 VGFO15240 615 aaPredicted RBP25.08■■□□□ 1.61
SMARCC2-201ENST00000267064 CFAP65Q6ZU64 1925 aaKnown RBP25.08■■□□□ 1.61
SMARCC2-201ENST00000267064 SRPK2P78362 688 aaKnown RBP25.08■■□□□ 1.61
SMARCC2-201ENST00000267064 EIF3AQ14152 1382 aaKnown RBP25.08■■□□□ 1.6
SMARCC2-201ENST00000267064 IDI1Q13907 227 aa25.07■■□□□ 1.6
SMARCC2-201ENST00000267064 ZFYVE16Q7Z3T8 1539 aa25.07■■□□□ 1.6
SMARCC2-201ENST00000267064 DISP3Q9P2K9 1392 aa25.07■■□□□ 1.6
SMARCC2-201ENST00000267064 MAST1Q9Y2H9 1570 aa25.07■■□□□ 1.6
SMARCC2-201ENST00000267064 UHRF1BP1Q6BDS2 1440 aa25.06■■□□□ 1.6
SMARCC2-201ENST00000267064 MYBBP1AQ9BQG0 1328 aaKnown RBP25.06■■□□□ 1.6
SMARCC2-201ENST00000267064 NLRP13Q86W25 1043 aa25.06■■□□□ 1.6
SMARCC2-201ENST00000267064 POGZQ7Z3K3 1410 aa25.06■■□□□ 1.6
SMARCC2-201ENST00000267064 KDM5DQ9BY66 1539 aa25.05■■□□□ 1.6
SMARCC2-201ENST00000267064 STAC3Q96MF2 364 aa25.02■■□□□ 1.6
SMARCC2-201ENST00000267064 TESK2Q96S53 571 aa25.02■■□□□ 1.6
SMARCC2-201ENST00000267064 PLXNC1O60486 1568 aa25.02■■□□□ 1.6
SMARCC2-201ENST00000267064 CENPJQ9HC77 1338 aaPredicted RBP25.01■■□□□ 1.59
SMARCC2-201ENST00000267064 NOS1P29475 1434 aa25■■□□□ 1.59
SMARCC2-201ENST00000267064 YEATS2Q9ULM3 1422 aa25■■□□□ 1.59
SMARCC2-201ENST00000267064 ATP10AO60312 1499 aa25■■□□□ 1.59
SMARCC2-201ENST00000267064 UGGT1Q9NYU2 1555 aa24.99■■□□□ 1.59
SMARCC2-201ENST00000267064 ABCA9Q8IUA7 1624 aa24.99■■□□□ 1.59
SMARCC2-201ENST00000267064 MINK1Q8N4C8 1332 aaPredicted RBP24.98■■□□□ 1.59
SMARCC2-201ENST00000267064 ARAP3Q8WWN8 1544 aa24.95■■□□□ 1.58
SMARCC2-201ENST00000267064 NEUROD2Q15784 382 aa24.94■■□□□ 1.58
SMARCC2-201ENST00000267064 MORC1Q86VD1 984 aa24.93■■□□□ 1.58
SMARCC2-201ENST00000267064 PNISRQ8TF01 805 aaKnown RBP24.93■■□□□ 1.58
SMARCC2-201ENST00000267064 SLC12A5Q9H2X9 1139 aa24.93■■□□□ 1.58
SMARCC2-201ENST00000267064 SLC52A1Q9NWF4 448 aa24.93■■□□□ 1.58
SMARCC2-201ENST00000267064 CABP2Q9NPB3 220 aa24.92■■□□□ 1.58
SMARCC2-201ENST00000267064 UNC13BO14795 1591 aa24.92■■□□□ 1.58
SMARCC2-201ENST00000267064 SLC24A1O60721 1099 aa24.92■■□□□ 1.58
SMARCC2-201ENST00000267064 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
SMARCC2-201ENST00000267064 ZBED9Q6R2W3 1325 aa24.9■■□□□ 1.58
SMARCC2-201ENST00000267064 NPATQ14207 1427 aa24.9■■□□□ 1.58
SMARCC2-201ENST00000267064 PPM1GO15355 546 aaPredicted RBP24.9■■□□□ 1.58
SMARCC2-201ENST00000267064 CCDC146Q8IYE0 955 aa24.9■■□□□ 1.58
SMARCC2-201ENST00000267064 NEO1Q92859 1461 aa24.88■■□□□ 1.57
SMARCC2-201ENST00000267064 NUTM2FA1L443 756 aa24.87■■□□□ 1.57
SMARCC2-201ENST00000267064 TSPOAP1O95153 1857 aa24.86■■□□□ 1.57
SMARCC2-201ENST00000267064 KDM5CP41229 1560 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms