RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 ZBED9Q6R2W3 1325 aa18.36■□□□□ 0.53
AFF4-201ENST00000265343 DHX8Q14562 1220 aaKnown RBP18.36■□□□□ 0.53
AFF4-201ENST00000265343 CENPJQ9HC77 1338 aaPredicted RBP18.36■□□□□ 0.53
AFF4-201ENST00000265343 REC8O95072 547 aa18.35■□□□□ 0.53
AFF4-201ENST00000265343 HOMER1Q86YM7 354 aa18.35■□□□□ 0.53
AFF4-201ENST00000265343 H0YHG0 523 aa18.34■□□□□ 0.53
AFF4-201ENST00000265343 CCP110O43303 1012 aa18.34■□□□□ 0.53
AFF4-201ENST00000265343 RRP9O43818 475 aaKnown RBP18.34■□□□□ 0.53
AFF4-201ENST00000265343 SENP3-EIF4A1A0A087X0R7 540 aa18.34■□□□□ 0.53
AFF4-201ENST00000265343 MYO6Q9UM54 1294 aa18.34■□□□□ 0.53
AFF4-201ENST00000265343 VPS8Q8N3P4 1428 aa18.34■□□□□ 0.53
AFF4-201ENST00000265343 KAT6BQ8WYB5 2073 aa18.33■□□□□ 0.53
AFF4-201ENST00000265343 KIF15Q9NS87 1388 aa18.33■□□□□ 0.53
AFF4-201ENST00000265343 PDE4AP27815 886 aa18.33■□□□□ 0.52
AFF4-201ENST00000265343 LMOD3Q0VAK6 560 aa18.33■□□□□ 0.52
AFF4-201ENST00000265343 ZNF592Q92610 1267 aa18.33■□□□□ 0.52
AFF4-201ENST00000265343 NAT10Q9H0A0 1025 aaKnown RBP18.33■□□□□ 0.52
AFF4-201ENST00000265343 MRE11P49959 708 aa18.32■□□□□ 0.52
AFF4-201ENST00000265343 USP8P40818 1118 aa18.32■□□□□ 0.52
AFF4-201ENST00000265343 PRM3Q9NNZ6 103 aa18.32■□□□□ 0.52
AFF4-201ENST00000265343 SMC4Q9NTJ3 1288 aa18.31■□□□□ 0.52
AFF4-201ENST00000265343 LRRFIP1Q32MZ4 808 aaKnown RBP18.31■□□□□ 0.52
AFF4-201ENST00000265343 STK31Q9BXU1 1019 aa18.31■□□□□ 0.52
AFF4-201ENST00000265343 AAMPQ13685 434 aa18.31■□□□□ 0.52
AFF4-201ENST00000265343 LEKR1Q6ZMV7 388 aa18.31■□□□□ 0.52
AFF4-201ENST00000265343 ISY1Q9ULR0 285 aaKnown RBP18.31■□□□□ 0.52
AFF4-201ENST00000265343 NUCB2P80303 420 aa18.31■□□□□ 0.52
AFF4-201ENST00000265343 PODXL2Q9NZ53 605 aa18.31■□□□□ 0.52
AFF4-201ENST00000265343 NLRP13Q86W25 1043 aa18.3■□□□□ 0.52
AFF4-201ENST00000265343 MNS1Q8NEH6 495 aa18.3■□□□□ 0.52
AFF4-201ENST00000265343 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
AFF4-201ENST00000265343 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
AFF4-201ENST00000265343 SIN3AQ96ST3 1273 aa18.29■□□□□ 0.52
AFF4-201ENST00000265343 NASPP49321 788 aaPredicted RBP18.29■□□□□ 0.52
AFF4-201ENST00000265343 CHMP5Q9NZZ3 219 aa18.29■□□□□ 0.52
AFF4-201ENST00000265343 PATL2C9JE40 543 aaKnown RBP18.28■□□□□ 0.52
AFF4-201ENST00000265343 PES1O00541 588 aaKnown RBP18.28■□□□□ 0.52
AFF4-201ENST00000265343 LETM1O95202 739 aaPredicted RBP18.28■□□□□ 0.52
AFF4-201ENST00000265343 DCAF11Q8TEB1 546 aa18.28■□□□□ 0.52
AFF4-201ENST00000265343 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
AFF4-201ENST00000265343 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
AFF4-201ENST00000265343 CREBRFQ8IUR6 639 aa18.27■□□□□ 0.52
AFF4-201ENST00000265343 ROCK1Q13464 1354 aa18.27■□□□□ 0.51
AFF4-201ENST00000265343 FAM184AQ8NB25 1140 aa18.26■□□□□ 0.51
AFF4-201ENST00000265343 TSPYL1Q9H0U9 437 aa18.26■□□□□ 0.51
AFF4-201ENST00000265343 HSPA5P11021 654 aaKnown RBP18.26■□□□□ 0.51
AFF4-201ENST00000265343 NGEFQ8N5V2 710 aa18.26■□□□□ 0.51
AFF4-201ENST00000265343 CAVIN1Q6NZI2 390 aaKnown RBP18.25■□□□□ 0.51
AFF4-201ENST00000265343 CAGE1Q8TC20 777 aa18.25■□□□□ 0.51
AFF4-201ENST00000265343 IFT57Q9NWB7 429 aa18.25■□□□□ 0.51
AFF4-201ENST00000265343 APBB1O00213 710 aa18.25■□□□□ 0.51
AFF4-201ENST00000265343 GORABQ5T7V8 394 aa18.25■□□□□ 0.51
AFF4-201ENST00000265343 INCENPQ9NQS7 918 aa18.25■□□□□ 0.51
AFF4-201ENST00000265343 HDGFL2Q7Z4V5 671 aaPredicted RBP18.25■□□□□ 0.51
AFF4-201ENST00000265343 GOLGA6L7A0A1B0GV03 622 aa18.24■□□□□ 0.51
AFF4-201ENST00000265343 CCDC173Q0VFZ6 552 aa18.23■□□□□ 0.51
AFF4-201ENST00000265343 ZRSR2Q15696 482 aaKnown RBP18.23■□□□□ 0.51
AFF4-201ENST00000265343 CCDC47Q96A33 483 aaKnown RBP18.22■□□□□ 0.51
AFF4-201ENST00000265343 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
AFF4-201ENST00000265343 RUFY2Q8WXA3 655 aa18.22■□□□□ 0.51
AFF4-201ENST00000265343 SASS6Q6UVJ0 657 aa18.21■□□□□ 0.51
AFF4-201ENST00000265343 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
AFF4-201ENST00000265343 BAZ1BQ9UIG0 1483 aaKnown RBP18.21■□□□□ 0.51
AFF4-201ENST00000265343 CPLX2Q6PUV4 134 aaKnown RBP18.21■□□□□ 0.51
AFF4-201ENST00000265343 SRPK2P78362 688 aaKnown RBP18.21■□□□□ 0.5
AFF4-201ENST00000265343 FMN1Q68DA7 1419 aa18.2■□□□□ 0.5
AFF4-201ENST00000265343 U2AF1L5P0DN76 240 aaPredicted RBP18.2■□□□□ 0.5
AFF4-201ENST00000265343 U2AF1Q01081 240 aaKnown RBP eCLIP18.2■□□□□ 0.5
AFF4-201ENST00000265343 DEF6Q9H4E7 631 aa18.19■□□□□ 0.5
AFF4-201ENST00000265343 NACADO15069 1562 aa18.19■□□□□ 0.5
AFF4-201ENST00000265343 AKAP17AQ02040 695 aaKnown RBP18.19■□□□□ 0.5
AFF4-201ENST00000265343 MYBBP1AQ9BQG0 1328 aaKnown RBP18.19■□□□□ 0.5
AFF4-201ENST00000265343 RRP1P56182 461 aaKnown RBP18.18■□□□□ 0.5
AFF4-201ENST00000265343 NEXNQ0ZGT2 675 aa18.18■□□□□ 0.5
AFF4-201ENST00000265343 ZKSCAN1P17029 563 aaPredicted RBP18.18■□□□□ 0.5
AFF4-201ENST00000265343 KIAA0754O94854 1291 aa18.17■□□□□ 0.5
AFF4-201ENST00000265343 MBD3O95983 291 aa18.17■□□□□ 0.5
AFF4-201ENST00000265343 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
AFF4-201ENST00000265343 FOXD4L1Q9NU39 408 aa18.16■□□□□ 0.5
AFF4-201ENST00000265343 E9PSI1 815 aa18.15■□□□□ 0.5
AFF4-201ENST00000265343 TRIM29Q14134 588 aa18.15■□□□□ 0.5
AFF4-201ENST00000265343 RNF20Q5VTR2 975 aa18.15■□□□□ 0.5
AFF4-201ENST00000265343 STK11IPQ8N1F8 1099 aa18.15■□□□□ 0.5
AFF4-201ENST00000265343 EIF3JO75822 258 aaKnown RBP18.14■□□□□ 0.49
AFF4-201ENST00000265343 GOLGA6L10A6NI86 522 aa18.13■□□□□ 0.49
AFF4-201ENST00000265343 TMX4Q9H1E5 349 aaPredicted RBP18.13■□□□□ 0.49
AFF4-201ENST00000265343 SYNE3Q6ZMZ3 975 aa18.12■□□□□ 0.49
AFF4-201ENST00000265343 PDCL2Q8N4E4 241 aa18.12■□□□□ 0.49
AFF4-201ENST00000265343 MARCH6O60337 910 aa18.12■□□□□ 0.49
AFF4-201ENST00000265343 NOL8Q76FK4 1167 aaKnown RBP18.12■□□□□ 0.49
AFF4-201ENST00000265343 PCMTD1Q96MG8 357 aaPredicted RBP18.12■□□□□ 0.49
AFF4-201ENST00000265343 BICD2Q8TD16 824 aa18.11■□□□□ 0.49
AFF4-201ENST00000265343 TERF2IPQ9NYB0 399 aa18.11■□□□□ 0.49
AFF4-201ENST00000265343 DDX19BQ9UMR2 479 aa18.11■□□□□ 0.49
AFF4-201ENST00000265343 R3HCC1Q9Y3T6 440 aaKnown RBP18.11■□□□□ 0.49
AFF4-201ENST00000265343 NFKBIBQ15653 356 aa18.11■□□□□ 0.49
AFF4-201ENST00000265343 CCDC73Q6ZRK6 1079 aa18.11■□□□□ 0.49
AFF4-201ENST00000265343 DYDC1Q8WWB3 177 aa18.11■□□□□ 0.49
AFF4-201ENST00000265343 PDE4CQ08493 712 aa18.1■□□□□ 0.49
AFF4-201ENST00000265343 TAF7LQ5H9L4 462 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms