RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 MORC1Q86VD1 984 aa7.06□□□□□ -1.28
VCAN-201ENST00000265077 SENP3-EIF4A1A0A087X0R7 540 aa7.06□□□□□ -1.28
VCAN-201ENST00000265077 ESPNB1AK53 854 aa7.06□□□□□ -1.28
VCAN-201ENST00000265077 TPRNQ4KMQ1 711 aa7.06□□□□□ -1.28
VCAN-201ENST00000265077 KIF15Q9NS87 1388 aa7.05□□□□□ -1.28
VCAN-201ENST00000265077 CCDC34Q96HJ3 373 aa7.05□□□□□ -1.28
VCAN-201ENST00000265077 KCNH8Q96L42 1107 aa7.05□□□□□ -1.28
VCAN-201ENST00000265077 ISY1Q9ULR0 285 aaKnown RBP7.05□□□□□ -1.28
VCAN-201ENST00000265077 GPATCH3Q96I76 525 aa7.05□□□□□ -1.28
VCAN-201ENST00000265077 ANKRD30AQ9BXX3 1397 aa7.05□□□□□ -1.28
VCAN-201ENST00000265077 TPM4P67936 248 aa7.05□□□□□ -1.28
VCAN-201ENST00000265077 MROH2BQ7Z745 1585 aa7.04□□□□□ -1.28
VCAN-201ENST00000265077 PLCD3Q8N3E9 789 aa7.04□□□□□ -1.28
VCAN-201ENST00000265077 PRDM10Q9NQV6 1147 aa7.04□□□□□ -1.28
VCAN-201ENST00000265077 IPO4Q8TEX9 1081 aaKnown RBP7.04□□□□□ -1.28
VCAN-201ENST00000265077 UQCRHLA0A096LP55 91 aa7.04□□□□□ -1.28
VCAN-201ENST00000265077 UQCRHP07919 91 aa7.04□□□□□ -1.28
VCAN-201ENST00000265077 MPHOSPH9Q99550 1183 aa7.04□□□□□ -1.28
VCAN-201ENST00000265077 CGNQ9P2M7 1197 aaKnown RBP7.04□□□□□ -1.28
VCAN-201ENST00000265077 E9PSI1 815 aa7.03□□□□□ -1.28
VCAN-201ENST00000265077 KLHL34Q8N239 644 aa7.03□□□□□ -1.28
VCAN-201ENST00000265077 AXDND1Q5T1B0 1012 aaPredicted RBP7.03□□□□□ -1.28
VCAN-201ENST00000265077 WWC1Q8IX03 1113 aa7.03□□□□□ -1.28
VCAN-201ENST00000265077 DNAJC2Q99543 621 aaKnown RBP7.03□□□□□ -1.28
VCAN-201ENST00000265077 CECR2Q9BXF3 1484 aa7.03□□□□□ -1.28
VCAN-201ENST00000265077 ST18O60284 1047 aa7.03□□□□□ -1.28
VCAN-201ENST00000265077 CENPQQ7L2Z9 268 aaPredicted RBP7.03□□□□□ -1.28
VCAN-201ENST00000265077 CLGNO14967 610 aa7.03□□□□□ -1.28
VCAN-201ENST00000265077 SLC4A3P48751 1232 aa7.03□□□□□ -1.28
VCAN-201ENST00000265077 DEF6Q9H4E7 631 aa7.03□□□□□ -1.28
VCAN-201ENST00000265077 HDAC5Q9UQL6 1122 aa7.03□□□□□ -1.28
VCAN-201ENST00000265077 ITPRIPQ8IWB1 547 aa7.02□□□□□ -1.29
VCAN-201ENST00000265077 SMARCA4P51532 1647 aa7.02□□□□□ -1.29
VCAN-201ENST00000265077 CCDC18Q5T9S5 1454 aa7.02□□□□□ -1.29
VCAN-201ENST00000265077 HDGFP51858 240 aaKnown RBP7.02□□□□□ -1.29
VCAN-201ENST00000265077 HMMRO75330 724 aa7.02□□□□□ -1.29
VCAN-201ENST00000265077 NASPP49321 788 aaPredicted RBP7.02□□□□□ -1.29
VCAN-201ENST00000265077 CARMIL2Q6F5E8 1435 aa7.02□□□□□ -1.29
VCAN-201ENST00000265077 RTF1Q92541 710 aaKnown RBP7.01□□□□□ -1.29
VCAN-201ENST00000265077 FRAT2O75474 233 aaPredicted RBP7.01□□□□□ -1.29
VCAN-201ENST00000265077 CENPJQ9HC77 1338 aaPredicted RBP7.01□□□□□ -1.29
VCAN-201ENST00000265077 GOLGA2Q08379 1002 aa7.01□□□□□ -1.29
VCAN-201ENST00000265077 CUX1P39880 1505 aa7.01□□□□□ -1.29
VCAN-201ENST00000265077 PLPPR3Q6T4P5 718 aa7.01□□□□□ -1.29
VCAN-201ENST00000265077 SMAP1Q8IYB5 467 aaPredicted RBP7.01□□□□□ -1.29
VCAN-201ENST00000265077 PRDM2Q13029 1718 aa7.01□□□□□ -1.29
VCAN-201ENST00000265077 PKD2Q13563 968 aa7.01□□□□□ -1.29
VCAN-201ENST00000265077 LETM1O95202 739 aaPredicted RBP7.01□□□□□ -1.29
VCAN-201ENST00000265077 CALCOCO1Q9P1Z2 691 aa7.01□□□□□ -1.29
VCAN-201ENST00000265077 KANK4Q5T7N3 995 aaPredicted RBP7□□□□□ -1.29
VCAN-201ENST00000265077 CCDC9Q9Y3X0 531 aaKnown RBP7□□□□□ -1.29
VCAN-201ENST00000265077 KIF3AQ9Y496 699 aa7□□□□□ -1.29
VCAN-201ENST00000265077 CCDC173Q0VFZ6 552 aa7□□□□□ -1.29
VCAN-201ENST00000265077 LMOD3Q0VAK6 560 aa7□□□□□ -1.29
VCAN-201ENST00000265077 GNL2Q13823 731 aaKnown RBP7□□□□□ -1.29
VCAN-201ENST00000265077 MYBBP1AQ9BQG0 1328 aaKnown RBP7□□□□□ -1.29
VCAN-201ENST00000265077 FAM161AQ3B820 660 aa7□□□□□ -1.29
VCAN-201ENST00000265077 GTPBP4Q9BZE4 634 aaKnown RBP7□□□□□ -1.29
VCAN-201ENST00000265077 CCDC39Q9UFE4 941 aa7□□□□□ -1.29
VCAN-201ENST00000265077 NGEFQ8N5V2 710 aa7□□□□□ -1.29
VCAN-201ENST00000265077 HDGFL2Q7Z4V5 671 aaPredicted RBP7□□□□□ -1.29
VCAN-201ENST00000265077 DIAPH3Q9NSV4 1193 aa7□□□□□ -1.29
VCAN-201ENST00000265077 ERCC6Q03468 1493 aa6.99□□□□□ -1.29
VCAN-201ENST00000265077 RAPGEF2Q9Y4G8 1499 aa6.99□□□□□ -1.29
VCAN-201ENST00000265077 U2AF1L5P0DN76 240 aaPredicted RBP6.99□□□□□ -1.29
VCAN-201ENST00000265077 SRPK2P78362 688 aaKnown RBP6.99□□□□□ -1.29
VCAN-201ENST00000265077 U2AF1Q01081 240 aaKnown RBP eCLIP6.99□□□□□ -1.29
VCAN-201ENST00000265077 RSPH4AQ5TD94 716 aa6.99□□□□□ -1.29
VCAN-201ENST00000265077 CLCN1P35523 988 aa6.99□□□□□ -1.29
VCAN-201ENST00000265077 DHX57Q6P158 1386 aaKnown RBP6.99□□□□□ -1.29
VCAN-201ENST00000265077 A0A0G2JS52 829 aa6.99□□□□□ -1.29
VCAN-201ENST00000265077 CGNL1Q0VF96 1302 aa6.99□□□□□ -1.29
VCAN-201ENST00000265077 CHMP4CQ96CF2 233 aa6.99□□□□□ -1.29
VCAN-201ENST00000265077 KIF16BQ96L93 1317 aa6.99□□□□□ -1.29
VCAN-201ENST00000265077 NUP155O75694 1391 aa6.99□□□□□ -1.29
VCAN-201ENST00000265077 MFAP1P55081 439 aaKnown RBP6.98□□□□□ -1.29
VCAN-201ENST00000265077 KIF21BO75037 1637 aa6.98□□□□□ -1.29
VCAN-201ENST00000265077 TIGD1Q96MW7 591 aa6.98□□□□□ -1.29
VCAN-201ENST00000265077 ATP6V1DQ9Y5K8 247 aa6.97□□□□□ -1.29
VCAN-201ENST00000265077 SPAG9O60271 1321 aaKnown RBP6.97□□□□□ -1.29
VCAN-201ENST00000265077 SMC4Q9NTJ3 1288 aa6.97□□□□□ -1.29
VCAN-201ENST00000265077 KIF20AO95235 890 aa6.97□□□□□ -1.29
VCAN-201ENST00000265077 NOC3LQ8WTT2 800 aaKnown RBP6.97□□□□□ -1.29
VCAN-201ENST00000265077 STK31Q9BXU1 1019 aa6.97□□□□□ -1.29
VCAN-201ENST00000265077 RRP1P56182 461 aaKnown RBP6.97□□□□□ -1.29
VCAN-201ENST00000265077 UACAQ9BZF9 1416 aa6.97□□□□□ -1.29
VCAN-201ENST00000265077 DYNC1I1O14576 645 aa6.97□□□□□ -1.29
VCAN-201ENST00000265077 SSR1P43307 286 aaKnown RBP6.96□□□□□ -1.29
VCAN-201ENST00000265077 RDXP35241 583 aaKnown RBP6.96□□□□□ -1.3
VCAN-201ENST00000265077 BCCIPQ9P287 314 aaKnown RBP eCLIP6.96□□□□□ -1.3
VCAN-201ENST00000265077 GRPEL1Q9HAV7 217 aa6.96□□□□□ -1.3
VCAN-201ENST00000265077 DHX37Q8IY37 1157 aaKnown RBP6.96□□□□□ -1.3
VCAN-201ENST00000265077 WASHC2AQ641Q2 1341 aa6.96□□□□□ -1.3
VCAN-201ENST00000265077 PPP4R3BQ5MIZ7 849 aa6.96□□□□□ -1.3
VCAN-201ENST00000265077 ZSCAN30Q86W11 494 aa6.96□□□□□ -1.3
VCAN-201ENST00000265077 FOXD1Q16676 465 aa6.95□□□□□ -1.3
VCAN-201ENST00000265077 ZNF526Q8TF50 670 aaPredicted RBP6.95□□□□□ -1.3
VCAN-201ENST00000265077 VGLL3A8MV65 326 aa6.95□□□□□ -1.3
VCAN-201ENST00000265077 TERF2IPQ9NYB0 399 aa6.95□□□□□ -1.3
VCAN-201ENST00000265077 GTF2A1P52655 376 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms