RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 STK31Q9BXU1 1019 aa17.84■□□□□ 0.45
CDH1-201ENST00000261769 HDAC5Q9UQL6 1122 aa17.84■□□□□ 0.45
CDH1-201ENST00000261769 PSME1Q06323 249 aa17.84■□□□□ 0.45
CDH1-201ENST00000261769 BECN1Q14457 450 aa17.84■□□□□ 0.45
CDH1-201ENST00000261769 THEMISQ8N1K5 641 aaPredicted RBP17.84■□□□□ 0.45
CDH1-201ENST00000261769 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
CDH1-201ENST00000261769 NLRP13Q86W25 1043 aa17.83■□□□□ 0.45
CDH1-201ENST00000261769 CGNL1Q0VF96 1302 aa17.83■□□□□ 0.44
CDH1-201ENST00000261769 PHLDB1Q86UU1 1377 aa17.81■□□□□ 0.44
CDH1-201ENST00000261769 TXNDC2Q86VQ3 553 aa17.8■□□□□ 0.44
CDH1-201ENST00000261769 SCAPERQ9BY12 1400 aa17.8■□□□□ 0.44
CDH1-201ENST00000261769 CENPJQ9HC77 1338 aaPredicted RBP17.78■□□□□ 0.44
CDH1-201ENST00000261769 RAPGEF3O95398 923 aa17.77■□□□□ 0.44
CDH1-201ENST00000261769 MEX3CQ5U5Q3 659 aaKnown RBP17.77■□□□□ 0.44
CDH1-201ENST00000261769 SLC52A1Q9NWF4 448 aa17.77■□□□□ 0.44
CDH1-201ENST00000261769 MIA2Q96PC5 1412 aa17.76■□□□□ 0.43
CDH1-201ENST00000261769 KCNJ4P48050 445 aa17.76■□□□□ 0.43
CDH1-201ENST00000261769 PANK3Q9H999 370 aa17.76■□□□□ 0.43
CDH1-201ENST00000261769 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
CDH1-201ENST00000261769 NCLP19338 710 aaKnown RBP17.75■□□□□ 0.43
CDH1-201ENST00000261769 DDRGK1Q96HY6 314 aa17.75■□□□□ 0.43
CDH1-201ENST00000261769 C1orf141Q5JVX7 400 aa17.75■□□□□ 0.43
CDH1-201ENST00000261769 FGD1P98174 961 aa17.74■□□□□ 0.43
CDH1-201ENST00000261769 USP47Q96K76 1375 aa17.74■□□□□ 0.43
CDH1-201ENST00000261769 HECW1Q76N89 1606 aa17.73■□□□□ 0.43
CDH1-201ENST00000261769 EHBP1L1Q8N3D4 1523 aa17.73■□□□□ 0.43
CDH1-201ENST00000261769 GRIN2AQ12879 1464 aa17.73■□□□□ 0.43
CDH1-201ENST00000261769 PPP4R2Q9NY27 417 aa17.73■□□□□ 0.43
CDH1-201ENST00000261769 PROSER2Q86WR7 435 aaPredicted RBP17.73■□□□□ 0.43
CDH1-201ENST00000261769 PEG3Q9GZU2 1588 aa17.73■□□□□ 0.43
CDH1-201ENST00000261769 CFAP44Q96MT7 982 aa17.72■□□□□ 0.43
CDH1-201ENST00000261769 C9orf84Q5VXU9 1444 aa17.72■□□□□ 0.43
CDH1-201ENST00000261769 IQGAP2Q13576 1575 aa17.71■□□□□ 0.43
CDH1-201ENST00000261769 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.43
CDH1-201ENST00000261769 RGS3P49796 1198 aa17.71■□□□□ 0.43
CDH1-201ENST00000261769 ANKLE2Q86XL3 938 aa17.7■□□□□ 0.42
CDH1-201ENST00000261769 CD109Q6YHK3 1445 aa17.7■□□□□ 0.42
CDH1-201ENST00000261769 GTF2E1P29083 439 aaPredicted RBP17.7■□□□□ 0.42
CDH1-201ENST00000261769 GOLGA6L22H0YM25 854 aa17.7■□□□□ 0.42
CDH1-201ENST00000261769 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
CDH1-201ENST00000261769 TEFQ10587 303 aa17.69■□□□□ 0.42
CDH1-201ENST00000261769 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
CDH1-201ENST00000261769 TAF7LQ5H9L4 462 aa17.68■□□□□ 0.42
CDH1-201ENST00000261769 CDK11BP21127 795 aaKnown RBP17.67■□□□□ 0.42
CDH1-201ENST00000261769 MYBBP1AQ9BQG0 1328 aaKnown RBP17.67■□□□□ 0.42
CDH1-201ENST00000261769 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
CDH1-201ENST00000261769 CUL7Q14999 1698 aa17.65■□□□□ 0.42
CDH1-201ENST00000261769 PDE3BQ13370 1112 aa17.65■□□□□ 0.42
CDH1-201ENST00000261769 SMC4Q9NTJ3 1288 aa17.65■□□□□ 0.42
CDH1-201ENST00000261769 HMMRO75330 724 aa17.63■□□□□ 0.41
CDH1-201ENST00000261769 ZRSR1Q15695 479 aaKnown RBP17.63■□□□□ 0.41
CDH1-201ENST00000261769 GORABQ5T7V8 394 aa17.63■□□□□ 0.41
CDH1-201ENST00000261769 TTC5Q8N0Z6 440 aa17.63■□□□□ 0.41
CDH1-201ENST00000261769 RCAN3Q9UKA8 241 aa17.63■□□□□ 0.41
CDH1-201ENST00000261769 ITPRIPQ8IWB1 547 aa17.63■□□□□ 0.41
CDH1-201ENST00000261769 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
CDH1-201ENST00000261769 CCDC146Q8IYE0 955 aa17.63■□□□□ 0.41
CDH1-201ENST00000261769 DIAPH1O60610 1272 aaKnown RBP17.62■□□□□ 0.41
CDH1-201ENST00000261769 CHMP3Q9Y3E7 222 aa17.62■□□□□ 0.41
CDH1-201ENST00000261769 MCCP23508 829 aa17.62■□□□□ 0.41
CDH1-201ENST00000261769 EPRSP07814 1512 aaKnown RBP17.62■□□□□ 0.41
CDH1-201ENST00000261769 RAPGEF4Q8WZA2 1011 aa17.62■□□□□ 0.41
CDH1-201ENST00000261769 G3V3G9 751 aa17.61■□□□□ 0.41
CDH1-201ENST00000261769 DCAF8Q5TAQ9 597 aa17.61■□□□□ 0.41
CDH1-201ENST00000261769 RWDD1Q9H446 243 aaPredicted RBP17.61■□□□□ 0.41
CDH1-201ENST00000261769 ZNF608Q9ULD9 1512 aaPredicted RBP17.6■□□□□ 0.41
CDH1-201ENST00000261769 RPGRIP1LQ68CZ1 1315 aa17.6■□□□□ 0.41
CDH1-201ENST00000261769 NLRP6P59044 892 aa17.6■□□□□ 0.41
CDH1-201ENST00000261769 CFAP70Q5T0N1 1121 aa17.6■□□□□ 0.41
CDH1-201ENST00000261769 ANP32EQ9BTT0 268 aa17.6■□□□□ 0.41
CDH1-201ENST00000261769 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
CDH1-201ENST00000261769 ESCO1Q5FWF5 840 aa17.58■□□□□ 0.41
CDH1-201ENST00000261769 SLC4A10Q6U841 1118 aa17.58■□□□□ 0.41
CDH1-201ENST00000261769 NGEFQ8N5V2 710 aa17.58■□□□□ 0.4
CDH1-201ENST00000261769 APBB1O00213 710 aa17.58■□□□□ 0.4
CDH1-201ENST00000261769 KIAA1211Q6ZU35 1233 aa17.58■□□□□ 0.4
CDH1-201ENST00000261769 GPATCH3Q96I76 525 aa17.57■□□□□ 0.4
CDH1-201ENST00000261769 MSH5O43196 834 aa17.56■□□□□ 0.4
CDH1-201ENST00000261769 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
CDH1-201ENST00000261769 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
CDH1-201ENST00000261769 CABP2Q9NPB3 220 aa17.55■□□□□ 0.4
CDH1-201ENST00000261769 ISY1Q9ULR0 285 aaKnown RBP17.55■□□□□ 0.4
CDH1-201ENST00000261769 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
CDH1-201ENST00000261769 PRAM1Q96QH2 718 aa17.53■□□□□ 0.4
CDH1-201ENST00000261769 ADGRL1O94910 1474 aa17.53■□□□□ 0.4
CDH1-201ENST00000261769 KIAA1107Q9UPP5 1409 aa17.53■□□□□ 0.4
CDH1-201ENST00000261769 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
CDH1-201ENST00000261769 CDK13Q14004 1512 aaKnown RBP17.53■□□□□ 0.4
CDH1-201ENST00000261769 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
CDH1-201ENST00000261769 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
CDH1-201ENST00000261769 NEXNQ0ZGT2 675 aa17.53■□□□□ 0.4
CDH1-201ENST00000261769 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
CDH1-201ENST00000261769 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
CDH1-201ENST00000261769 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
CDH1-201ENST00000261769 DAPK1P53355 1430 aa17.52■□□□□ 0.4
CDH1-201ENST00000261769 ARHGEF11O15085 1522 aa17.52■□□□□ 0.4
CDH1-201ENST00000261769 SLC26A8Q96RN1 970 aa17.52■□□□□ 0.39
CDH1-201ENST00000261769 TIAM1Q13009 1591 aa17.51■□□□□ 0.39
CDH1-201ENST00000261769 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
CDH1-201ENST00000261769 PRKRIP1Q9H875 184 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms