RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 HMMRO75330 724 aa17.76■□□□□ 0.43
CUX2-201ENST00000261726 KIF16BQ96L93 1317 aa17.76■□□□□ 0.43
CUX2-201ENST00000261726 CCAR2Q8N163 923 aaKnown RBP17.75■□□□□ 0.43
CUX2-201ENST00000261726 GTF2E1P29083 439 aaPredicted RBP17.75■□□□□ 0.43
CUX2-201ENST00000261726 LTV1Q96GA3 475 aaPredicted RBP17.75■□□□□ 0.43
CUX2-201ENST00000261726 PKD2Q13563 968 aa17.74■□□□□ 0.43
CUX2-201ENST00000261726 TCERG1O14776 1098 aaKnown RBP17.74■□□□□ 0.43
CUX2-201ENST00000261726 CCER2I3L3R5 266 aa17.74■□□□□ 0.43
CUX2-201ENST00000261726 FOXD4L6Q3SYB3 417 aaPredicted RBP17.73■□□□□ 0.43
CUX2-201ENST00000261726 FOXD4L3Q6VB84 417 aaPredicted RBP17.73■□□□□ 0.43
CUX2-201ENST00000261726 CADPSQ9ULU8 1353 aa17.72■□□□□ 0.43
CUX2-201ENST00000261726 H3BQV1 296 aa17.72■□□□□ 0.43
CUX2-201ENST00000261726 IFFO2Q5TF58 517 aa17.72■□□□□ 0.43
CUX2-201ENST00000261726 NUTM2DQ5VT03 806 aaPredicted RBP17.72■□□□□ 0.43
CUX2-201ENST00000261726 RUSC2Q8N2Y8 1516 aa17.71■□□□□ 0.43
CUX2-201ENST00000261726 PHF14O94880 888 aa17.71■□□□□ 0.43
CUX2-201ENST00000261726 USP35Q9P2H5 1018 aa17.71■□□□□ 0.43
CUX2-201ENST00000261726 RAD21O60216 631 aa17.7■□□□□ 0.42
CUX2-201ENST00000261726 SETQ01105 290 aaPredicted RBP17.7■□□□□ 0.42
CUX2-201ENST00000261726 ST18O60284 1047 aa17.69■□□□□ 0.42
CUX2-201ENST00000261726 TSR1Q2NL82 804 aaKnown RBP17.69■□□□□ 0.42
CUX2-201ENST00000261726 RILPL2Q969X0 211 aa17.69■□□□□ 0.42
CUX2-201ENST00000261726 NUTM2FA1L443 756 aa17.68■□□□□ 0.42
CUX2-201ENST00000261726 CC2D2AQ9P2K1 1620 aa17.68■□□□□ 0.42
CUX2-201ENST00000261726 AMPHP49418 695 aa17.68■□□□□ 0.42
CUX2-201ENST00000261726 HDAC5Q9UQL6 1122 aa17.68■□□□□ 0.42
CUX2-201ENST00000261726 CHMP4AQ9BY43 222 aa17.67■□□□□ 0.42
CUX2-201ENST00000261726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.67■□□□□ 0.42
CUX2-201ENST00000261726 NGDNQ8NEJ9 315 aaKnown RBP17.67■□□□□ 0.42
CUX2-201ENST00000261726 RALBP1Q15311 655 aa17.67■□□□□ 0.42
CUX2-201ENST00000261726 FAM184AQ8NB25 1140 aa17.66■□□□□ 0.42
CUX2-201ENST00000261726 PDS5BQ9NTI5 1447 aa17.65■□□□□ 0.42
CUX2-201ENST00000261726 KIF3AQ9Y496 699 aa17.65■□□□□ 0.42
CUX2-201ENST00000261726 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
CUX2-201ENST00000261726 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
CUX2-201ENST00000261726 IPO9Q96P70 1041 aaKnown RBP17.65■□□□□ 0.42
CUX2-201ENST00000261726 CENPJQ9HC77 1338 aaPredicted RBP17.65■□□□□ 0.42
CUX2-201ENST00000261726 AKAP17AQ02040 695 aaKnown RBP17.65■□□□□ 0.42
CUX2-201ENST00000261726 TPM2P07951 284 aa17.64■□□□□ 0.42
CUX2-201ENST00000261726 TCEAL9Q9UHQ7 104 aa17.64■□□□□ 0.42
CUX2-201ENST00000261726 GOLGA6L19H0YKK7 550 aa17.64■□□□□ 0.41
CUX2-201ENST00000261726 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
CUX2-201ENST00000261726 PCMTD1Q96MG8 357 aaPredicted RBP17.63■□□□□ 0.41
CUX2-201ENST00000261726 ZNF592Q92610 1267 aa17.63■□□□□ 0.41
CUX2-201ENST00000261726 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.62■□□□□ 0.41
CUX2-201ENST00000261726 MSH5O43196 834 aa17.62■□□□□ 0.41
CUX2-201ENST00000261726 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
CUX2-201ENST00000261726 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
CUX2-201ENST00000261726 RRP7AQ9Y3A4 280 aaKnown RBP17.62■□□□□ 0.41
CUX2-201ENST00000261726 BECN2A8MW95 431 aa17.61■□□□□ 0.41
CUX2-201ENST00000261726 SETD5Q9C0A6 1442 aa17.61■□□□□ 0.41
CUX2-201ENST00000261726 TPM1P09493 284 aa17.61■□□□□ 0.41
CUX2-201ENST00000261726 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
CUX2-201ENST00000261726 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
CUX2-201ENST00000261726 NGEFQ8N5V2 710 aa17.59■□□□□ 0.41
CUX2-201ENST00000261726 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
CUX2-201ENST00000261726 CTDP1Q9Y5B0 961 aaPredicted RBP17.59■□□□□ 0.41
CUX2-201ENST00000261726 ELL2O00472 640 aaPredicted RBP17.59■□□□□ 0.41
CUX2-201ENST00000261726 CCDC70Q6NSX1 233 aa17.59■□□□□ 0.41
CUX2-201ENST00000261726 TRIM34Q9BYJ4 488 aa17.59■□□□□ 0.41
CUX2-201ENST00000261726 HSP90AA2PQ14568 343 aaPredicted RBP17.59■□□□□ 0.41
CUX2-201ENST00000261726 LMOD3Q0VAK6 560 aa17.58■□□□□ 0.41
CUX2-201ENST00000261726 DDX11L8A8MPP1 907 aa17.58■□□□□ 0.4
CUX2-201ENST00000261726 DDX49Q9Y6V7 483 aaKnown RBP17.58■□□□□ 0.4
CUX2-201ENST00000261726 ANKRD45Q5TZF3 282 aa17.58■□□□□ 0.4
CUX2-201ENST00000261726 SYNE3Q6ZMZ3 975 aa17.57■□□□□ 0.4
CUX2-201ENST00000261726 SLC4A3P48751 1232 aa17.57■□□□□ 0.4
CUX2-201ENST00000261726 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
CUX2-201ENST00000261726 EID1Q9Y6B2 187 aa17.56■□□□□ 0.4
CUX2-201ENST00000261726 NUP155O75694 1391 aa17.56■□□□□ 0.4
CUX2-201ENST00000261726 BCL2L13Q9BXK5 485 aa17.56■□□□□ 0.4
CUX2-201ENST00000261726 RAPGEF2Q9Y4G8 1499 aa17.56■□□□□ 0.4
CUX2-201ENST00000261726 FBXW7Q969H0 707 aa17.55■□□□□ 0.4
CUX2-201ENST00000261726 ZNF771Q7L3S4 317 aaPredicted RBP17.55■□□□□ 0.4
CUX2-201ENST00000261726 GPS2Q13227 327 aa17.54■□□□□ 0.4
CUX2-201ENST00000261726 DHX16O60231 1041 aaKnown RBP17.54■□□□□ 0.4
CUX2-201ENST00000261726 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
CUX2-201ENST00000261726 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
CUX2-201ENST00000261726 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
CUX2-201ENST00000261726 NOL10Q9BSC4 688 aaKnown RBP17.54■□□□□ 0.4
CUX2-201ENST00000261726 TIMELESSQ9UNS1 1208 aa17.53■□□□□ 0.4
CUX2-201ENST00000261726 AMOTL1Q8IY63 956 aa17.53■□□□□ 0.4
CUX2-201ENST00000261726 TRIM29Q14134 588 aa17.52■□□□□ 0.4
CUX2-201ENST00000261726 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
CUX2-201ENST00000261726 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
CUX2-201ENST00000261726 APPP05067 770 aa17.52■□□□□ 0.4
CUX2-201ENST00000261726 KIF3BO15066 747 aa17.52■□□□□ 0.39
CUX2-201ENST00000261726 EVA1CP58658 441 aa17.52■□□□□ 0.39
CUX2-201ENST00000261726 DIAPH3Q9NSV4 1193 aa17.51■□□□□ 0.39
CUX2-201ENST00000261726 SAMD1Q6SPF0 538 aaPredicted RBP17.51■□□□□ 0.39
CUX2-201ENST00000261726 ATP6V1DQ9Y5K8 247 aa17.5■□□□□ 0.39
CUX2-201ENST00000261726 ANO2Q9NQ90 1003 aa17.5■□□□□ 0.39
CUX2-201ENST00000261726 TSHZ2Q9NRE2 1034 aa17.5■□□□□ 0.39
CUX2-201ENST00000261726 IPO7O95373 1038 aaKnown RBP17.49■□□□□ 0.39
CUX2-201ENST00000261726 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
CUX2-201ENST00000261726 FOSBP53539 338 aa17.49■□□□□ 0.39
CUX2-201ENST00000261726 TRAK1Q9UPV9 953 aa17.49■□□□□ 0.39
CUX2-201ENST00000261726 NECTIN2Q92692 538 aa17.49■□□□□ 0.39
CUX2-201ENST00000261726 PLIN1O60240 522 aa17.48■□□□□ 0.39
CUX2-201ENST00000261726 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms