RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 WASHC2AQ641Q2 1341 aa12.01□□□□□ -0.49
CALCOCO2-201ENST00000258947 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
CALCOCO2-201ENST00000258947 ESF1Q9H501 851 aaKnown RBP12□□□□□ -0.49
CALCOCO2-201ENST00000258947 DUOX2Q9NRD8 1548 aa12□□□□□ -0.49
CALCOCO2-201ENST00000258947 ST20-MTHFSA0A0A6YYL1 179 aa12□□□□□ -0.49
CALCOCO2-201ENST00000258947 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
CALCOCO2-201ENST00000258947 ABCC1P33527 1531 aa11.99□□□□□ -0.49
CALCOCO2-201ENST00000258947 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
CALCOCO2-201ENST00000258947 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
CALCOCO2-201ENST00000258947 ARID4BQ4LE39 1312 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO2-201ENST00000258947 ERBINQ96RT1 1412 aa11.98□□□□□ -0.49
CALCOCO2-201ENST00000258947 NBPF1Q3BBV0 1214 aa11.97□□□□□ -0.49
CALCOCO2-201ENST00000258947 FAM9BQ8IZU0 186 aa11.97□□□□□ -0.49
CALCOCO2-201ENST00000258947 C11orf95C9JLR9 678 aaPredicted RBP11.97□□□□□ -0.49
CALCOCO2-201ENST00000258947 NUTM2DQ5VT03 806 aaPredicted RBP11.97□□□□□ -0.49
CALCOCO2-201ENST00000258947 DHX29Q7Z478 1369 aaKnown RBP11.96□□□□□ -0.49
CALCOCO2-201ENST00000258947 ZNF518AQ6AHZ1 1483 aa11.95□□□□□ -0.5
CALCOCO2-201ENST00000258947 TEX14Q8IWB6 1497 aa11.95□□□□□ -0.5
CALCOCO2-201ENST00000258947 MRS2Q9HD23 443 aa11.95□□□□□ -0.5
CALCOCO2-201ENST00000258947 KIF7Q2M1P5 1343 aa11.95□□□□□ -0.5
CALCOCO2-201ENST00000258947 ATP7AQ04656 1500 aa11.94□□□□□ -0.5
CALCOCO2-201ENST00000258947 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
CALCOCO2-201ENST00000258947 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
CALCOCO2-201ENST00000258947 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
CALCOCO2-201ENST00000258947 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
CALCOCO2-201ENST00000258947 BCANQ96GW7 911 aa11.91□□□□□ -0.5
CALCOCO2-201ENST00000258947 ABCA9Q8IUA7 1624 aa11.91□□□□□ -0.5
CALCOCO2-201ENST00000258947 A2MP01023 1474 aa11.91□□□□□ -0.5
CALCOCO2-201ENST00000258947 ZFYVE16Q7Z3T8 1539 aa11.9□□□□□ -0.5
CALCOCO2-201ENST00000258947 CCER2I3L3R5 266 aa11.89□□□□□ -0.51
CALCOCO2-201ENST00000258947 MAST1Q9Y2H9 1570 aa11.89□□□□□ -0.51
CALCOCO2-201ENST00000258947 ARAP3Q8WWN8 1544 aa11.89□□□□□ -0.51
CALCOCO2-201ENST00000258947 TMF1P82094 1093 aa11.89□□□□□ -0.51
CALCOCO2-201ENST00000258947 POGZQ7Z3K3 1410 aa11.89□□□□□ -0.51
CALCOCO2-201ENST00000258947 PLXNC1O60486 1568 aa11.88□□□□□ -0.51
CALCOCO2-201ENST00000258947 NEFLP07196 543 aa11.88□□□□□ -0.51
CALCOCO2-201ENST00000258947 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
CALCOCO2-201ENST00000258947 CFAP70Q5T0N1 1121 aa11.87□□□□□ -0.51
CALCOCO2-201ENST00000258947 KDM5DQ9BY66 1539 aa11.86□□□□□ -0.51
CALCOCO2-201ENST00000258947 PRKRIP1Q9H875 184 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO2-201ENST00000258947 CNTLNQ9NXG0 1405 aa11.86□□□□□ -0.51
CALCOCO2-201ENST00000258947 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
CALCOCO2-201ENST00000258947 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
CALCOCO2-201ENST00000258947 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
CALCOCO2-201ENST00000258947 PLA2R1Q13018 1463 aa11.85□□□□□ -0.51
CALCOCO2-201ENST00000258947 SAFB2Q14151 953 aaKnown RBP eCLIP11.85□□□□□ -0.51
CALCOCO2-201ENST00000258947 CC2D1BQ5T0F9 858 aaKnown RBP11.85□□□□□ -0.51
CALCOCO2-201ENST00000258947 TRAK1Q9UPV9 953 aa11.84□□□□□ -0.51
CALCOCO2-201ENST00000258947 STK26Q9P289 416 aa11.84□□□□□ -0.51
CALCOCO2-201ENST00000258947 CFAP65Q6ZU64 1925 aaKnown RBP11.84□□□□□ -0.51
CALCOCO2-201ENST00000258947 NEO1Q92859 1461 aa11.83□□□□□ -0.52
CALCOCO2-201ENST00000258947 PRAG1Q86YV5 1406 aa11.83□□□□□ -0.52
CALCOCO2-201ENST00000258947 TSPOAP1O95153 1857 aa11.83□□□□□ -0.52
CALCOCO2-201ENST00000258947 YEATS2Q9ULM3 1422 aa11.83□□□□□ -0.52
CALCOCO2-201ENST00000258947 TMEM132EQ6IEE7 984 aa11.82□□□□□ -0.52
CALCOCO2-201ENST00000258947 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
CALCOCO2-201ENST00000258947 RALGAPBQ86X10 1494 aa11.82□□□□□ -0.52
CALCOCO2-201ENST00000258947 UNC13BO14795 1591 aa11.82□□□□□ -0.52
CALCOCO2-201ENST00000258947 ADGRF5Q8IZF2 1346 aa11.81□□□□□ -0.52
CALCOCO2-201ENST00000258947 FBXO31Q5XUX0 539 aaPredicted RBP11.81□□□□□ -0.52
CALCOCO2-201ENST00000258947 CDCA8Q53HL2 280 aa11.81□□□□□ -0.52
CALCOCO2-201ENST00000258947 CCDC184Q52MB2 194 aa11.81□□□□□ -0.52
CALCOCO2-201ENST00000258947 KNSTRNQ9Y448 316 aa11.81□□□□□ -0.52
CALCOCO2-201ENST00000258947 IQGAP3Q86VI3 1631 aa11.81□□□□□ -0.52
CALCOCO2-201ENST00000258947 ATP10AO60312 1499 aa11.8□□□□□ -0.52
CALCOCO2-201ENST00000258947 CFAP74Q9C0B2 1584 aa11.8□□□□□ -0.52
CALCOCO2-201ENST00000258947 UHRF1BP1Q6BDS2 1440 aa11.8□□□□□ -0.52
CALCOCO2-201ENST00000258947 PANK3Q9H999 370 aa11.8□□□□□ -0.52
CALCOCO2-201ENST00000258947 MLH3Q9UHC1 1453 aa11.79□□□□□ -0.52
CALCOCO2-201ENST00000258947 IDI1Q13907 227 aa11.79□□□□□ -0.52
CALCOCO2-201ENST00000258947 VGFO15240 615 aaPredicted RBP11.78□□□□□ -0.52
CALCOCO2-201ENST00000258947 UGGT1Q9NYU2 1555 aa11.78□□□□□ -0.52
CALCOCO2-201ENST00000258947 INO80Q9ULG1 1556 aaPredicted RBP11.78□□□□□ -0.52
CALCOCO2-201ENST00000258947 EIF3AQ14152 1382 aaKnown RBP11.78□□□□□ -0.52
CALCOCO2-201ENST00000258947 SPATA31E1Q6ZUB1 1445 aa11.78□□□□□ -0.52
CALCOCO2-201ENST00000258947 HECW2Q9P2P5 1572 aa11.78□□□□□ -0.52
CALCOCO2-201ENST00000258947 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
CALCOCO2-201ENST00000258947 POGKQ9P215 609 aa11.76□□□□□ -0.53
CALCOCO2-201ENST00000258947 NOS1P29475 1434 aa11.76□□□□□ -0.53
CALCOCO2-201ENST00000258947 KIDINS220Q9ULH0 1771 aa11.76□□□□□ -0.53
CALCOCO2-201ENST00000258947 NPATQ14207 1427 aa11.76□□□□□ -0.53
CALCOCO2-201ENST00000258947 FKBP8Q14318 412 aa11.75□□□□□ -0.53
CALCOCO2-201ENST00000258947 MAGI2Q86UL8 1455 aa11.75□□□□□ -0.53
CALCOCO2-201ENST00000258947 KTN1Q86UP2 1357 aaKnown RBP11.75□□□□□ -0.53
CALCOCO2-201ENST00000258947 SLC52A1Q9NWF4 448 aa11.75□□□□□ -0.53
CALCOCO2-201ENST00000258947 DISP3Q9P2K9 1392 aa11.74□□□□□ -0.53
CALCOCO2-201ENST00000258947 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
CALCOCO2-201ENST00000258947 TNNT2P45379 298 aaPredicted RBP11.73□□□□□ -0.53
CALCOCO2-201ENST00000258947 E9PCH4 1651 aa11.73□□□□□ -0.53
CALCOCO2-201ENST00000258947 PRDM15P57071 1507 aaPredicted RBP11.73□□□□□ -0.53
CALCOCO2-201ENST00000258947 SRPK2P78362 688 aaKnown RBP11.73□□□□□ -0.53
CALCOCO2-201ENST00000258947 CENPJQ9HC77 1338 aaPredicted RBP11.72□□□□□ -0.53
CALCOCO2-201ENST00000258947 TRPM2O94759 1503 aa11.72□□□□□ -0.53
CALCOCO2-201ENST00000258947 IRX6P78412 446 aaPredicted RBP11.72□□□□□ -0.53
CALCOCO2-201ENST00000258947 PTPRTO14522 1441 aa11.72□□□□□ -0.53
CALCOCO2-201ENST00000258947 RALBP1Q15311 655 aa11.72□□□□□ -0.53
CALCOCO2-201ENST00000258947 TESK2Q96S53 571 aa11.72□□□□□ -0.53
CALCOCO2-201ENST00000258947 TET3O43151 1660 aa11.72□□□□□ -0.53
CALCOCO2-201ENST00000258947 KDM5CP41229 1560 aa11.7□□□□□ -0.54
CALCOCO2-201ENST00000258947 ABCA6Q8N139 1617 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms