RNA–Protein interactions for RNA: ENST00000256646.6

NOTCH2-201, Transcript of notch 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH2, Length 11,389 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-201ENST00000256646 PLIN1O60240 522 aa12.37□□□□□ -0.43
NOTCH2-201ENST00000256646 CNKSR2Q8WXI2 1034 aa12.37□□□□□ -0.43
NOTCH2-201ENST00000256646 SYAP1Q96A49 352 aaPredicted RBP12.37□□□□□ -0.43
NOTCH2-201ENST00000256646 CALD1Q05682 793 aaKnown RBP12.37□□□□□ -0.43
NOTCH2-201ENST00000256646 SYTL4Q96C24 671 aaPredicted RBP12.37□□□□□ -0.43
NOTCH2-201ENST00000256646 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
NOTCH2-201ENST00000256646 TCERG1O14776 1098 aaKnown RBP12.36□□□□□ -0.43
NOTCH2-201ENST00000256646 EVA1CP58658 441 aa12.36□□□□□ -0.43
NOTCH2-201ENST00000256646 KRI1Q8N9T8 703 aaKnown RBP12.36□□□□□ -0.43
NOTCH2-201ENST00000256646 HTATSF1O43719 755 aaKnown RBP12.36□□□□□ -0.43
NOTCH2-201ENST00000256646 WRNQ14191 1432 aaPredicted RBP eCLIP12.36□□□□□ -0.43
NOTCH2-201ENST00000256646 KIF16BQ96L93 1317 aa12.35□□□□□ -0.43
NOTCH2-201ENST00000256646 PCMTD1Q96MG8 357 aaPredicted RBP12.34□□□□□ -0.43
NOTCH2-201ENST00000256646 TCEAL9Q9UHQ7 104 aa12.34□□□□□ -0.43
NOTCH2-201ENST00000256646 TPM3P06753 285 aa12.34□□□□□ -0.43
NOTCH2-201ENST00000256646 EIF2S2P20042 333 aaKnown RBP12.34□□□□□ -0.43
NOTCH2-201ENST00000256646 TRAK1Q9UPV9 953 aa12.34□□□□□ -0.43
NOTCH2-201ENST00000256646 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
NOTCH2-201ENST00000256646 HNRNPMP52272 730 aaKnown RBP eCLIP12.33□□□□□ -0.44
NOTCH2-201ENST00000256646 ANKRD45Q5TZF3 282 aa12.33□□□□□ -0.44
NOTCH2-201ENST00000256646 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
NOTCH2-201ENST00000256646 PMFBP1Q8TBY8 1022 aa12.32□□□□□ -0.44
NOTCH2-201ENST00000256646 TRIM34Q9BYJ4 488 aa12.32□□□□□ -0.44
NOTCH2-201ENST00000256646 FYB1O15117 783 aa12.32□□□□□ -0.44
NOTCH2-201ENST00000256646 FAM184AQ8NB25 1140 aa12.31□□□□□ -0.44
NOTCH2-201ENST00000256646 MEX3CQ5U5Q3 659 aaKnown RBP12.31□□□□□ -0.44
NOTCH2-201ENST00000256646 APPP05067 770 aa12.31□□□□□ -0.44
NOTCH2-201ENST00000256646 CTDP1Q9Y5B0 961 aaPredicted RBP12.31□□□□□ -0.44
NOTCH2-201ENST00000256646 DHX16O60231 1041 aaKnown RBP12.3□□□□□ -0.44
NOTCH2-201ENST00000256646 CEP164Q9UPV0 1460 aa12.3□□□□□ -0.44
NOTCH2-201ENST00000256646 AKAP17AQ02040 695 aaKnown RBP12.3□□□□□ -0.44
NOTCH2-201ENST00000256646 KIF3BO15066 747 aa12.3□□□□□ -0.44
NOTCH2-201ENST00000256646 PTMSP20962 102 aa12.3□□□□□ -0.44
NOTCH2-201ENST00000256646 HMMRO75330 724 aa12.29□□□□□ -0.44
NOTCH2-201ENST00000256646 ARHGAP35Q9NRY4 1499 aa12.29□□□□□ -0.44
NOTCH2-201ENST00000256646 CENPJQ9HC77 1338 aaPredicted RBP12.29□□□□□ -0.44
NOTCH2-201ENST00000256646 NUP155O75694 1391 aa12.29□□□□□ -0.44
NOTCH2-201ENST00000256646 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
NOTCH2-201ENST00000256646 PHF23Q9BUL5 403 aaPredicted RBP12.29□□□□□ -0.44
NOTCH2-201ENST00000256646 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
NOTCH2-201ENST00000256646 RB1CC1Q8TDY2 1594 aa12.28□□□□□ -0.44
NOTCH2-201ENST00000256646 EEA1Q15075 1411 aa12.28□□□□□ -0.44
NOTCH2-201ENST00000256646 SETD5Q9C0A6 1442 aa12.28□□□□□ -0.44
NOTCH2-201ENST00000256646 CSPP1Q1MSJ5 1256 aa12.28□□□□□ -0.44
NOTCH2-201ENST00000256646 CUX2O14529 1486 aa12.28□□□□□ -0.44
NOTCH2-201ENST00000256646 MPHOSPH9Q99550 1183 aa12.28□□□□□ -0.44
NOTCH2-201ENST00000256646 EID1Q9Y6B2 187 aa12.28□□□□□ -0.44
NOTCH2-201ENST00000256646 TSR1Q2NL82 804 aaKnown RBP12.27□□□□□ -0.44
NOTCH2-201ENST00000256646 CWC22Q9HCG8 908 aaKnown RBP12.27□□□□□ -0.45
NOTCH2-201ENST00000256646 ST18O60284 1047 aa12.27□□□□□ -0.45
NOTCH2-201ENST00000256646 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
NOTCH2-201ENST00000256646 CCDC34Q96HJ3 373 aa12.27□□□□□ -0.45
NOTCH2-201ENST00000256646 ANO2Q9NQ90 1003 aa12.26□□□□□ -0.45
NOTCH2-201ENST00000256646 GOLGA6L19H0YKK7 550 aa12.26□□□□□ -0.45
NOTCH2-201ENST00000256646 VPS37DQ86XT2 251 aa12.26□□□□□ -0.45
NOTCH2-201ENST00000256646 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
NOTCH2-201ENST00000256646 SKIDA1Q1XH10 827 aa12.24□□□□□ -0.45
NOTCH2-201ENST00000256646 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
NOTCH2-201ENST00000256646 TIMELESSQ9UNS1 1208 aa12.24□□□□□ -0.45
NOTCH2-201ENST00000256646 WASHC2CQ9Y4E1 1318 aa12.24□□□□□ -0.45
NOTCH2-201ENST00000256646 PHF14O94880 888 aa12.24□□□□□ -0.45
NOTCH2-201ENST00000256646 IPO9Q96P70 1041 aaKnown RBP12.24□□□□□ -0.45
NOTCH2-201ENST00000256646 NUTM2GQ5VZR2 741 aa12.24□□□□□ -0.45
NOTCH2-201ENST00000256646 NOL10Q9BSC4 688 aaKnown RBP12.23□□□□□ -0.45
NOTCH2-201ENST00000256646 NFXL1Q6ZNB6 911 aa12.23□□□□□ -0.45
NOTCH2-201ENST00000256646 CRBNQ96SW2 442 aa12.23□□□□□ -0.45
NOTCH2-201ENST00000256646 CARMIL1Q5VZK9 1371 aa12.23□□□□□ -0.45
NOTCH2-201ENST00000256646 BECN2A8MW95 431 aa12.23□□□□□ -0.45
NOTCH2-201ENST00000256646 NAP1L1P55209 391 aaKnown RBP12.23□□□□□ -0.45
NOTCH2-201ENST00000256646 TNIKQ9UKE5 1360 aa12.23□□□□□ -0.45
NOTCH2-201ENST00000256646 SOGA1O94964 1423 aa12.23□□□□□ -0.45
NOTCH2-201ENST00000256646 RALBP1Q15311 655 aa12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 TPM2P07951 284 aa12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 ZNF771Q7L3S4 317 aaPredicted RBP12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 CCER2I3L3R5 266 aa12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 TTLL5Q6EMB2 1281 aa12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 SYNE3Q6ZMZ3 975 aa12.22□□□□□ -0.45
NOTCH2-201ENST00000256646 TSHZ2Q9NRE2 1034 aa12.21□□□□□ -0.45
NOTCH2-201ENST00000256646 SETQ01105 290 aaPredicted RBP12.21□□□□□ -0.46
NOTCH2-201ENST00000256646 PANK3Q9H999 370 aa12.21□□□□□ -0.46
NOTCH2-201ENST00000256646 DIAPH3Q9NSV4 1193 aa12.21□□□□□ -0.46
NOTCH2-201ENST00000256646 RAB3GAP2Q9H2M9 1393 aa12.2□□□□□ -0.46
NOTCH2-201ENST00000256646 EIF3AQ14152 1382 aaKnown RBP12.2□□□□□ -0.46
NOTCH2-201ENST00000256646 COG6Q9Y2V7 657 aa12.2□□□□□ -0.46
NOTCH2-201ENST00000256646 CCDC27Q2M243 656 aa12.2□□□□□ -0.46
NOTCH2-201ENST00000256646 STK11IPQ8N1F8 1099 aa12.2□□□□□ -0.46
NOTCH2-201ENST00000256646 DHX37Q8IY37 1157 aaKnown RBP12.2□□□□□ -0.46
NOTCH2-201ENST00000256646 AIMP1Q12904 312 aaKnown RBP12.19□□□□□ -0.46
NOTCH2-201ENST00000256646 FHAD1B1AJZ9 1412 aa12.19□□□□□ -0.46
NOTCH2-201ENST00000256646 HSP90AA2PQ14568 343 aaPredicted RBP12.19□□□□□ -0.46
NOTCH2-201ENST00000256646 TRIM29Q14134 588 aa12.19□□□□□ -0.46
NOTCH2-201ENST00000256646 KAT6BQ8WYB5 2073 aa12.19□□□□□ -0.46
NOTCH2-201ENST00000256646 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
NOTCH2-201ENST00000256646 EXOC6Q8TAG9 804 aa12.18□□□□□ -0.46
NOTCH2-201ENST00000256646 TPM1P09493 284 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms