RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 HSCBQ8IWL3 235 aa23.09■■□□□ 1.29
EFR3A-201ENST00000254624 PANK3Q9H999 370 aa23.09■■□□□ 1.29
EFR3A-201ENST00000254624 NCOA2Q15596 1464 aa23.09■■□□□ 1.29
EFR3A-201ENST00000254624 PRG4Q92954 1404 aaPredicted RBP23.08■■□□□ 1.29
EFR3A-201ENST00000254624 TOP2BQ02880 1626 aa23.08■■□□□ 1.28
EFR3A-201ENST00000254624 PMFBP1Q8TBY8 1022 aa23.07■■□□□ 1.28
EFR3A-201ENST00000254624 COG3Q96JB2 828 aa23.06■■□□□ 1.28
EFR3A-201ENST00000254624 SMC4Q9NTJ3 1288 aa23.06■■□□□ 1.28
EFR3A-201ENST00000254624 ANKRD50Q9ULJ7 1429 aa23.05■■□□□ 1.28
EFR3A-201ENST00000254624 ARHGAP5Q13017 1502 aa23.04■■□□□ 1.28
EFR3A-201ENST00000254624 CCDC9Q9Y3X0 531 aaKnown RBP23.04■■□□□ 1.28
EFR3A-201ENST00000254624 ZNF644Q9H582 1327 aaPredicted RBP23.03■■□□□ 1.28
EFR3A-201ENST00000254624 NAP1L2Q9ULW6 460 aaPredicted RBP23.03■■□□□ 1.28
EFR3A-201ENST00000254624 CCDC146Q8IYE0 955 aa23.02■■□□□ 1.28
EFR3A-201ENST00000254624 NOP58Q9Y2X3 529 aaKnown RBP23.02■■□□□ 1.28
EFR3A-201ENST00000254624 HMMRO75330 724 aa23.02■■□□□ 1.28
EFR3A-201ENST00000254624 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.27
EFR3A-201ENST00000254624 NUTM2FA1L443 756 aa23.01■■□□□ 1.27
EFR3A-201ENST00000254624 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
EFR3A-201ENST00000254624 POLA1P09884 1462 aaPredicted RBP23.01■■□□□ 1.27
EFR3A-201ENST00000254624 KIAA1211Q6ZU35 1233 aa23.01■■□□□ 1.27
EFR3A-201ENST00000254624 PTMAP06454 111 aaKnown RBP23■■□□□ 1.27
EFR3A-201ENST00000254624 ZNF330Q9Y3S2 320 aaPredicted RBP23■■□□□ 1.27
EFR3A-201ENST00000254624 MINK1Q8N4C8 1332 aaPredicted RBP22.98■■□□□ 1.27
EFR3A-201ENST00000254624 PLEKHH2Q8IVE3 1493 aa22.97■■□□□ 1.27
EFR3A-201ENST00000254624 LTV1Q96GA3 475 aaPredicted RBP22.97■■□□□ 1.27
EFR3A-201ENST00000254624 APBB1O00213 710 aa22.96■■□□□ 1.27
EFR3A-201ENST00000254624 PRXQ9BXM0 1461 aa22.96■■□□□ 1.27
EFR3A-201ENST00000254624 GPATCH3Q96I76 525 aa22.95■■□□□ 1.27
EFR3A-201ENST00000254624 EHBP1L1Q8N3D4 1523 aa22.95■■□□□ 1.27
EFR3A-201ENST00000254624 TCERG1O14776 1098 aaKnown RBP22.95■■□□□ 1.26
EFR3A-201ENST00000254624 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
EFR3A-201ENST00000254624 TMX4Q9H1E5 349 aaPredicted RBP22.94■■□□□ 1.26
EFR3A-201ENST00000254624 ARAP1Q96P48 1450 aa22.94■■□□□ 1.26
EFR3A-201ENST00000254624 TPRNQ4KMQ1 711 aa22.93■■□□□ 1.26
EFR3A-201ENST00000254624 MIA2Q96PC5 1412 aa22.93■■□□□ 1.26
EFR3A-201ENST00000254624 GOLGA6L4A6NEF3 574 aa22.93■■□□□ 1.26
EFR3A-201ENST00000254624 PRKRIP1Q9H875 184 aaPredicted RBP22.93■■□□□ 1.26
EFR3A-201ENST00000254624 NGEFQ8N5V2 710 aa22.91■■□□□ 1.26
EFR3A-201ENST00000254624 HECW1Q76N89 1606 aa22.9■■□□□ 1.26
EFR3A-201ENST00000254624 GOLGA6L6A8MZA4 724 aa22.9■■□□□ 1.26
EFR3A-201ENST00000254624 C1orf141Q5JVX7 400 aa22.9■■□□□ 1.26
EFR3A-201ENST00000254624 TAF7LQ5H9L4 462 aa22.89■■□□□ 1.26
EFR3A-201ENST00000254624 TAOK2Q9UL54 1235 aa22.89■■□□□ 1.26
EFR3A-201ENST00000254624 GORABQ5T7V8 394 aa22.88■■□□□ 1.25
EFR3A-201ENST00000254624 E9PSI1 815 aa22.88■■□□□ 1.25
EFR3A-201ENST00000254624 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
EFR3A-201ENST00000254624 LAMC3Q9Y6N6 1575 aa22.87■■□□□ 1.25
EFR3A-201ENST00000254624 SLC4A10Q6U841 1118 aa22.87■■□□□ 1.25
EFR3A-201ENST00000254624 TROQ12816 1431 aaPredicted RBP22.86■■□□□ 1.25
EFR3A-201ENST00000254624 CHMP3Q9Y3E7 222 aa22.86■■□□□ 1.25
EFR3A-201ENST00000254624 AFAP1Q8N556 730 aa22.85■■□□□ 1.25
EFR3A-201ENST00000254624 DIAPH1O60610 1272 aaKnown RBP22.84■■□□□ 1.25
EFR3A-201ENST00000254624 GLIPR1L2Q4G1C9 344 aa22.83■■□□□ 1.25
EFR3A-201ENST00000254624 EVA1CP58658 441 aa22.83■■□□□ 1.25
EFR3A-201ENST00000254624 RRP7AQ9Y3A4 280 aaKnown RBP22.83■■□□□ 1.25
EFR3A-201ENST00000254624 CLUAP1Q96AJ1 413 aa22.83■■□□□ 1.24
EFR3A-201ENST00000254624 PSME1Q06323 249 aa22.82■■□□□ 1.24
EFR3A-201ENST00000254624 HFM1A2PYH4 1435 aa22.82■■□□□ 1.24
EFR3A-201ENST00000254624 NRDCO43847 1150 aa22.81■■□□□ 1.24
EFR3A-201ENST00000254624 PTMSP20962 102 aa22.81■■□□□ 1.24
EFR3A-201ENST00000254624 KIAA0586Q9BVV6 1533 aa22.81■■□□□ 1.24
EFR3A-201ENST00000254624 ABCA10Q8WWZ4 1543 aa22.8■■□□□ 1.24
EFR3A-201ENST00000254624 C9orf84Q5VXU9 1444 aa22.8■■□□□ 1.24
EFR3A-201ENST00000254624 TEFQ10587 303 aa22.8■■□□□ 1.24
EFR3A-201ENST00000254624 GNL2Q13823 731 aaKnown RBP22.79■■□□□ 1.24
EFR3A-201ENST00000254624 ZBED9Q6R2W3 1325 aa22.79■■□□□ 1.24
EFR3A-201ENST00000254624 CCDC7Q96M83 1385 aa22.78■■□□□ 1.24
EFR3A-201ENST00000254624 BICRAQ9NZM4 1560 aa22.78■■□□□ 1.24
EFR3A-201ENST00000254624 PLCB2Q00722 1185 aa22.77■■□□□ 1.24
EFR3A-201ENST00000254624 ZKSCAN2Q63HK3 967 aa22.77■■□□□ 1.24
EFR3A-201ENST00000254624 TRIM6-TRIM34B2RNG4 842 aa22.76■■□□□ 1.23
EFR3A-201ENST00000254624 DNTTIP2Q5QJE6 756 aaKnown RBP22.76■■□□□ 1.23
EFR3A-201ENST00000254624 ISY1Q9ULR0 285 aaKnown RBP22.76■■□□□ 1.23
EFR3A-201ENST00000254624 ATF3P18847 181 aa22.74■■□□□ 1.23
EFR3A-201ENST00000254624 TULP1O00294 542 aaPredicted RBP22.74■■□□□ 1.23
EFR3A-201ENST00000254624 HTATSF1O43719 755 aaKnown RBP22.74■■□□□ 1.23
EFR3A-201ENST00000254624 TTC5Q8N0Z6 440 aa22.74■■□□□ 1.23
EFR3A-201ENST00000254624 GBP4Q96PP9 640 aa22.74■■□□□ 1.23
EFR3A-201ENST00000254624 TIAM1Q13009 1591 aa22.73■■□□□ 1.23
EFR3A-201ENST00000254624 GTF2E1P29083 439 aaPredicted RBP22.73■■□□□ 1.23
EFR3A-201ENST00000254624 KIF7Q2M1P5 1343 aa22.73■■□□□ 1.23
EFR3A-201ENST00000254624 RBM19Q9Y4C8 960 aaKnown RBP22.72■■□□□ 1.23
EFR3A-201ENST00000254624 SPRYD3Q8NCJ5 442 aa22.71■■□□□ 1.23
EFR3A-201ENST00000254624 RUNDC1Q96C34 613 aa22.71■■□□□ 1.23
EFR3A-201ENST00000254624 APAF1O14727 1248 aa22.71■■□□□ 1.23
EFR3A-201ENST00000254624 SUPT6HQ7KZ85 1726 aaKnown RBP22.7■■□□□ 1.22
EFR3A-201ENST00000254624 KIAA1107Q9UPP5 1409 aa22.7■■□□□ 1.22
EFR3A-201ENST00000254624 CUL7Q14999 1698 aa22.7■■□□□ 1.22
EFR3A-201ENST00000254624 MFAP1P55081 439 aaKnown RBP22.7■■□□□ 1.22
EFR3A-201ENST00000254624 CNTLNQ9NXG0 1405 aa22.69■■□□□ 1.22
EFR3A-201ENST00000254624 CENPQQ7L2Z9 268 aaPredicted RBP22.69■■□□□ 1.22
EFR3A-201ENST00000254624 L1TD1Q5T7N2 865 aaKnown RBP22.69■■□□□ 1.22
EFR3A-201ENST00000254624 IQGAP2Q13576 1575 aa22.68■■□□□ 1.22
EFR3A-201ENST00000254624 SCAPERQ9BY12 1400 aa22.68■■□□□ 1.22
EFR3A-201ENST00000254624 NEXNQ0ZGT2 675 aa22.68■■□□□ 1.22
EFR3A-201ENST00000254624 RIPK4P57078 832 aa22.68■■□□□ 1.22
EFR3A-201ENST00000254624 G3V3G9 751 aa22.68■■□□□ 1.22
EFR3A-201ENST00000254624 DCAF8Q5TAQ9 597 aa22.68■■□□□ 1.22
EFR3A-201ENST00000254624 ELL2O00472 640 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms