RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 ADCY10Q96PN6 1610 aa21.06■□□□□ 0.96
RFX1-201ENST00000254325 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
RFX1-201ENST00000254325 PLCH2O75038 1416 aa21.04■□□□□ 0.96
RFX1-201ENST00000254325 ZBED9Q6R2W3 1325 aa21.04■□□□□ 0.96
RFX1-201ENST00000254325 WDR43Q15061 677 aaKnown RBP eCLIP21.04■□□□□ 0.96
RFX1-201ENST00000254325 CDC42BPAQ5VT25 1732 aa21.03■□□□□ 0.96
RFX1-201ENST00000254325 MBD5Q9P267 1494 aa21.03■□□□□ 0.96
RFX1-201ENST00000254325 SCAPERQ9BY12 1400 aa21.02■□□□□ 0.96
RFX1-201ENST00000254325 FAM135AQ9P2D6 1515 aa21.02■□□□□ 0.96
RFX1-201ENST00000254325 PPP4R2Q9NY27 417 aa21.01■□□□□ 0.95
RFX1-201ENST00000254325 MYBBP1AQ9BQG0 1328 aaKnown RBP21.01■□□□□ 0.95
RFX1-201ENST00000254325 PANK3Q9H999 370 aa21■□□□□ 0.95
RFX1-201ENST00000254325 CCDC136Q96JN2 1154 aa21■□□□□ 0.95
RFX1-201ENST00000254325 TSHZ2Q9NRE2 1034 aa21■□□□□ 0.95
RFX1-201ENST00000254325 NLRP13Q86W25 1043 aa20.99■□□□□ 0.95
RFX1-201ENST00000254325 KDM5BQ9UGL1 1544 aa20.99■□□□□ 0.95
RFX1-201ENST00000254325 STAG3Q9UJ98 1225 aa20.99■□□□□ 0.95
RFX1-201ENST00000254325 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
RFX1-201ENST00000254325 ARHGEF5Q12774 1597 aa20.98■□□□□ 0.95
RFX1-201ENST00000254325 SAMD9LQ8IVG5 1584 aa20.97■□□□□ 0.95
RFX1-201ENST00000254325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.97■□□□□ 0.95
RFX1-201ENST00000254325 TRAPPC8Q9Y2L5 1435 aa20.96■□□□□ 0.95
RFX1-201ENST00000254325 B4GALNT3Q6L9W6 998 aa20.96■□□□□ 0.95
RFX1-201ENST00000254325 RALGAPBQ86X10 1494 aa20.96■□□□□ 0.95
RFX1-201ENST00000254325 WASHC2CQ9Y4E1 1318 aa20.94■□□□□ 0.94
RFX1-201ENST00000254325 DUOX2Q9NRD8 1548 aa20.94■□□□□ 0.94
RFX1-201ENST00000254325 NUDCQ9Y266 331 aa20.93■□□□□ 0.94
RFX1-201ENST00000254325 TTC37Q6PGP7 1564 aa20.93■□□□□ 0.94
RFX1-201ENST00000254325 FANCAO15360 1455 aa20.92■□□□□ 0.94
RFX1-201ENST00000254325 PREX2Q70Z35 1606 aa20.92■□□□□ 0.94
RFX1-201ENST00000254325 SPATA31E1Q6ZUB1 1445 aa20.91■□□□□ 0.94
RFX1-201ENST00000254325 EIF3AQ14152 1382 aaKnown RBP20.91■□□□□ 0.94
RFX1-201ENST00000254325 ADGRL1O94910 1474 aa20.9■□□□□ 0.94
RFX1-201ENST00000254325 CROCC2H7BZ55 1655 aa20.9■□□□□ 0.94
RFX1-201ENST00000254325 ARHGEF12Q9NZN5 1544 aa20.9■□□□□ 0.94
RFX1-201ENST00000254325 ERICH6BQ5W0A0 696 aa20.9■□□□□ 0.94
RFX1-201ENST00000254325 ERBINQ96RT1 1412 aa20.89■□□□□ 0.94
RFX1-201ENST00000254325 SLC24A1O60721 1099 aa20.89■□□□□ 0.94
RFX1-201ENST00000254325 CYB5RLQ6IPT4 315 aa20.89■□□□□ 0.93
RFX1-201ENST00000254325 UHRF1BP1Q6BDS2 1440 aa20.88■□□□□ 0.93
RFX1-201ENST00000254325 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
RFX1-201ENST00000254325 MYO5CQ9NQX4 1742 aa20.87■□□□□ 0.93
RFX1-201ENST00000254325 STAC3Q96MF2 364 aa20.87■□□□□ 0.93
RFX1-201ENST00000254325 ESF1Q9H501 851 aaKnown RBP20.87■□□□□ 0.93
RFX1-201ENST00000254325 PNISRQ8TF01 805 aaKnown RBP20.86■□□□□ 0.93
RFX1-201ENST00000254325 PRAG1Q86YV5 1406 aa20.86■□□□□ 0.93
RFX1-201ENST00000254325 NUTM2DQ5VT03 806 aaPredicted RBP20.85■□□□□ 0.93
RFX1-201ENST00000254325 BRD4O60885 1362 aaPredicted RBP20.85■□□□□ 0.93
RFX1-201ENST00000254325 ASXL2Q76L83 1435 aa20.84■□□□□ 0.93
RFX1-201ENST00000254325 CFAP70Q5T0N1 1121 aa20.84■□□□□ 0.93
RFX1-201ENST00000254325 TRAK1Q9UPV9 953 aa20.82■□□□□ 0.92
RFX1-201ENST00000254325 CDC42BPBQ9Y5S2 1711 aa20.82■□□□□ 0.92
RFX1-201ENST00000254325 TNNT2P45379 298 aaPredicted RBP20.81■□□□□ 0.92
RFX1-201ENST00000254325 UHRF1BP1LA0JNW5 1464 aa20.81■□□□□ 0.92
RFX1-201ENST00000254325 RBM19Q9Y4C8 960 aaKnown RBP20.81■□□□□ 0.92
RFX1-201ENST00000254325 ZCCHC11Q5TAX3 1644 aaKnown RBP20.8■□□□□ 0.92
RFX1-201ENST00000254325 DHX29Q7Z478 1369 aaKnown RBP20.8■□□□□ 0.92
RFX1-201ENST00000254325 CD109Q6YHK3 1445 aa20.8■□□□□ 0.92
RFX1-201ENST00000254325 SAFB2Q14151 953 aaKnown RBP eCLIP20.79■□□□□ 0.92
RFX1-201ENST00000254325 RAPGEF3O95398 923 aa20.79■□□□□ 0.92
RFX1-201ENST00000254325 KDM5DQ9BY66 1539 aa20.79■□□□□ 0.92
RFX1-201ENST00000254325 RCAN3Q9UKA8 241 aa20.77■□□□□ 0.92
RFX1-201ENST00000254325 A2MP01023 1474 aa20.77■□□□□ 0.92
RFX1-201ENST00000254325 CANXP27824 592 aaKnown RBP20.76■□□□□ 0.91
RFX1-201ENST00000254325 MLECQ14165 292 aa20.76■□□□□ 0.91
RFX1-201ENST00000254325 STK26Q9P289 416 aa20.76■□□□□ 0.91
RFX1-201ENST00000254325 RTEL1-TNFRSF6BF6WH68 1400 aa20.76■□□□□ 0.91
RFX1-201ENST00000254325 DISP3Q9P2K9 1392 aa20.75■□□□□ 0.91
RFX1-201ENST00000254325 SHROOM2Q13796 1616 aa20.74■□□□□ 0.91
RFX1-201ENST00000254325 PDE3BQ13370 1112 aa20.73■□□□□ 0.91
RFX1-201ENST00000254325 MORC1Q86VD1 984 aa20.72■□□□□ 0.91
RFX1-201ENST00000254325 POGKQ9P215 609 aa20.72■□□□□ 0.91
RFX1-201ENST00000254325 KDM5CP41229 1560 aa20.72■□□□□ 0.91
RFX1-201ENST00000254325 MAST1Q9Y2H9 1570 aa20.72■□□□□ 0.91
RFX1-201ENST00000254325 ABCC1P33527 1531 aa20.71■□□□□ 0.91
RFX1-201ENST00000254325 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.71■□□□□ 0.91
RFX1-201ENST00000254325 TESK2Q96S53 571 aa20.71■□□□□ 0.91
RFX1-201ENST00000254325 TMEM132EQ6IEE7 984 aa20.7■□□□□ 0.9
RFX1-201ENST00000254325 PLA2R1Q13018 1463 aa20.69■□□□□ 0.9
RFX1-201ENST00000254325 FAM69CQ0P6D2 419 aa20.69■□□□□ 0.9
RFX1-201ENST00000254325 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
RFX1-201ENST00000254325 CENPJQ9HC77 1338 aaPredicted RBP20.69■□□□□ 0.9
RFX1-201ENST00000254325 NEUROD2Q15784 382 aa20.69■□□□□ 0.9
RFX1-201ENST00000254325 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
RFX1-201ENST00000254325 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
RFX1-201ENST00000254325 CFAP53Q96M91 514 aa20.68■□□□□ 0.9
RFX1-201ENST00000254325 ADGRF5Q8IZF2 1346 aa20.68■□□□□ 0.9
RFX1-201ENST00000254325 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
RFX1-201ENST00000254325 ATP7AQ04656 1500 aa20.67■□□□□ 0.9
RFX1-201ENST00000254325 SMG6Q86US8 1419 aaKnown RBP20.67■□□□□ 0.9
RFX1-201ENST00000254325 CCDC146Q8IYE0 955 aa20.67■□□□□ 0.9
RFX1-201ENST00000254325 PLXNC1O60486 1568 aa20.66■□□□□ 0.9
RFX1-201ENST00000254325 ANP32AP39687 249 aaKnown RBP20.66■□□□□ 0.9
RFX1-201ENST00000254325 PPP2R1AP30153 589 aa20.65■□□□□ 0.9
RFX1-201ENST00000254325 ADAMTS8Q9UP79 889 aa20.64■□□□□ 0.89
RFX1-201ENST00000254325 EIF2AK4Q9P2K8 1649 aaKnown RBP20.64■□□□□ 0.89
RFX1-201ENST00000254325 NPM2Q86SE8 214 aaKnown RBP20.64■□□□□ 0.89
RFX1-201ENST00000254325 ZNF518AQ6AHZ1 1483 aa20.64■□□□□ 0.89
RFX1-201ENST00000254325 GPRASP1Q5JY77 1395 aa20.63■□□□□ 0.89
RFX1-201ENST00000254325 SCAF11Q99590 1463 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms