RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 PRDM16Q9HAZ2 1276 aa19.96■□□□□ 0.79
PMPCB-201ENST00000249269 PLCD4Q9BRC7 762 aa19.96■□□□□ 0.79
PMPCB-201ENST00000249269 L3MBTL2Q969R5 705 aa19.95■□□□□ 0.78
PMPCB-201ENST00000249269 ARID3AQ99856 593 aa19.95■□□□□ 0.78
PMPCB-201ENST00000249269 GTF2E1P29083 439 aaPredicted RBP19.94■□□□□ 0.78
PMPCB-201ENST00000249269 MRS2Q9HD23 443 aa19.94■□□□□ 0.78
PMPCB-201ENST00000249269 ROCK2O75116 1388 aaKnown RBP19.94■□□□□ 0.78
PMPCB-201ENST00000249269 KTN1Q86UP2 1357 aaKnown RBP19.94■□□□□ 0.78
PMPCB-201ENST00000249269 DAPK1P53355 1430 aa19.94■□□□□ 0.78
PMPCB-201ENST00000249269 KDM6BO15054 1643 aa19.93■□□□□ 0.78
PMPCB-201ENST00000249269 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
PMPCB-201ENST00000249269 NPM1P06748 294 aaKnown RBP eCLIP19.92■□□□□ 0.78
PMPCB-201ENST00000249269 ZBTB22O15209 634 aa19.92■□□□□ 0.78
PMPCB-201ENST00000249269 MBD5Q9P267 1494 aa19.9■□□□□ 0.78
PMPCB-201ENST00000249269 RRP7BPQ9NSQ0 103 aa19.9■□□□□ 0.78
PMPCB-201ENST00000249269 GRIPAP1Q4V328 841 aa19.89■□□□□ 0.77
PMPCB-201ENST00000249269 FAM43BQ6ZT52 329 aaPredicted RBP19.89■□□□□ 0.77
PMPCB-201ENST00000249269 ZNF526Q8TF50 670 aaPredicted RBP19.88■□□□□ 0.77
PMPCB-201ENST00000249269 PBRM1Q86U86 1689 aa19.88■□□□□ 0.77
PMPCB-201ENST00000249269 KIF7Q2M1P5 1343 aa19.88■□□□□ 0.77
PMPCB-201ENST00000249269 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
PMPCB-201ENST00000249269 KIF14Q15058 1648 aa19.87■□□□□ 0.77
PMPCB-201ENST00000249269 IL27Q8NEV9 243 aa19.86■□□□□ 0.77
PMPCB-201ENST00000249269 ZNF428Q96B54 188 aa19.86■□□□□ 0.77
PMPCB-201ENST00000249269 ADGBQ8N7X0 1667 aa19.86■□□□□ 0.77
PMPCB-201ENST00000249269 NUDCQ9Y266 331 aa19.86■□□□□ 0.77
PMPCB-201ENST00000249269 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
PMPCB-201ENST00000249269 ABCC5O15440 1437 aa19.85■□□□□ 0.77
PMPCB-201ENST00000249269 ZBTB7CA1YPR0 619 aa19.85■□□□□ 0.77
PMPCB-201ENST00000249269 ADGRL2O95490 1459 aa19.85■□□□□ 0.77
PMPCB-201ENST00000249269 NOP58Q9Y2X3 529 aaKnown RBP19.84■□□□□ 0.77
PMPCB-201ENST00000249269 UHRF1BP1Q6BDS2 1440 aa19.83■□□□□ 0.77
PMPCB-201ENST00000249269 ITSN2Q9NZM3 1697 aa19.83■□□□□ 0.77
PMPCB-201ENST00000249269 DHX29Q7Z478 1369 aaKnown RBP19.83■□□□□ 0.76
PMPCB-201ENST00000249269 C11orf95C9JLR9 678 aaPredicted RBP19.82■□□□□ 0.76
PMPCB-201ENST00000249269 FAM9BQ8IZU0 186 aa19.81■□□□□ 0.76
PMPCB-201ENST00000249269 ARHGEF12Q9NZN5 1544 aa19.81■□□□□ 0.76
PMPCB-201ENST00000249269 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
PMPCB-201ENST00000249269 CCDC184Q52MB2 194 aa19.8■□□□□ 0.76
PMPCB-201ENST00000249269 NBPF8Q3BBV2 869 aa19.79■□□□□ 0.76
PMPCB-201ENST00000249269 KIAA1107Q9UPP5 1409 aa19.79■□□□□ 0.76
PMPCB-201ENST00000249269 CC2D2BQ6DHV5 1058 aa19.79■□□□□ 0.76
PMPCB-201ENST00000249269 INSRP06213 1382 aa19.79■□□□□ 0.76
PMPCB-201ENST00000249269 PZPP20742 1482 aa19.78■□□□□ 0.76
PMPCB-201ENST00000249269 KDM5CP41229 1560 aa19.78■□□□□ 0.76
PMPCB-201ENST00000249269 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
PMPCB-201ENST00000249269 ADCY10Q96PN6 1610 aa19.77■□□□□ 0.76
PMPCB-201ENST00000249269 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.76
PMPCB-201ENST00000249269 ANP32AP39687 249 aaKnown RBP19.77■□□□□ 0.75
PMPCB-201ENST00000249269 ZMYM4Q5VZL5 1548 aa19.76■□□□□ 0.75
PMPCB-201ENST00000249269 B4GALNT3Q6L9W6 998 aa19.76■□□□□ 0.75
PMPCB-201ENST00000249269 STAC3Q96MF2 364 aa19.76■□□□□ 0.75
PMPCB-201ENST00000249269 RALGAPBQ86X10 1494 aa19.76■□□□□ 0.75
PMPCB-201ENST00000249269 TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
PMPCB-201ENST00000249269 CROCC2H7BZ55 1655 aa19.76■□□□□ 0.75
PMPCB-201ENST00000249269 PTMSP20962 102 aa19.75■□□□□ 0.75
PMPCB-201ENST00000249269 IPO9Q96P70 1041 aaKnown RBP19.75■□□□□ 0.75
PMPCB-201ENST00000249269 KIAA0556O60303 1618 aa19.75■□□□□ 0.75
PMPCB-201ENST00000249269 KIAA0586Q9BVV6 1533 aa19.74■□□□□ 0.75
PMPCB-201ENST00000249269 RAPGEF6Q8TEU7 1601 aa19.74■□□□□ 0.75
PMPCB-201ENST00000249269 BRD4O60885 1362 aaPredicted RBP19.73■□□□□ 0.75
PMPCB-201ENST00000249269 LRPPRCP42704 1394 aaKnown RBP19.73■□□□□ 0.75
PMPCB-201ENST00000249269 USP47Q96K76 1375 aa19.72■□□□□ 0.75
PMPCB-201ENST00000249269 KDM5DQ9BY66 1539 aa19.72■□□□□ 0.75
PMPCB-201ENST00000249269 KIF15Q9NS87 1388 aa19.72■□□□□ 0.75
PMPCB-201ENST00000249269 MCCP23508 829 aa19.71■□□□□ 0.75
PMPCB-201ENST00000249269 SHANK2Q9UPX8 1470 aa19.71■□□□□ 0.75
PMPCB-201ENST00000249269 PDE3BQ13370 1112 aa19.7■□□□□ 0.74
PMPCB-201ENST00000249269 RALBP1Q15311 655 aa19.7■□□□□ 0.74
PMPCB-201ENST00000249269 TROQ12816 1431 aaPredicted RBP19.7■□□□□ 0.74
PMPCB-201ENST00000249269 CNGB1Q14028 1251 aaPredicted RBP19.69■□□□□ 0.74
PMPCB-201ENST00000249269 NUP153P49790 1475 aaKnown RBP19.69■□□□□ 0.74
PMPCB-201ENST00000249269 BCORL1Q5H9F3 1711 aa19.69■□□□□ 0.74
PMPCB-201ENST00000249269 PTMAP06454 111 aaKnown RBP19.68■□□□□ 0.74
PMPCB-201ENST00000249269 PNISRQ8TF01 805 aaKnown RBP19.68■□□□□ 0.74
PMPCB-201ENST00000249269 CAMSAP2Q08AD1 1489 aa19.67■□□□□ 0.74
PMPCB-201ENST00000249269 FOXD1Q16676 465 aa19.67■□□□□ 0.74
PMPCB-201ENST00000249269 TCERG1O14776 1098 aaKnown RBP19.66■□□□□ 0.74
PMPCB-201ENST00000249269 ANKRD30AQ9BXX3 1397 aa19.66■□□□□ 0.74
PMPCB-201ENST00000249269 USP35Q9P2H5 1018 aa19.66■□□□□ 0.74
PMPCB-201ENST00000249269 E9PCH4 1651 aa19.66■□□□□ 0.74
PMPCB-201ENST00000249269 DISP1Q96F81 1524 aa19.66■□□□□ 0.74
PMPCB-201ENST00000249269 MS4A1P11836 297 aa19.65■□□□□ 0.74
PMPCB-201ENST00000249269 FAM193AP78312 1265 aa19.65■□□□□ 0.74
PMPCB-201ENST00000249269 SETQ01105 290 aaPredicted RBP19.65■□□□□ 0.74
PMPCB-201ENST00000249269 FAM177A1Q8N128 213 aaPredicted RBP19.65■□□□□ 0.74
PMPCB-201ENST00000249269 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.73
PMPCB-201ENST00000249269 RTL5Q5HYW3 569 aaPredicted RBP19.63■□□□□ 0.73
PMPCB-201ENST00000249269 MYBBP1AQ9BQG0 1328 aaKnown RBP19.63■□□□□ 0.73
PMPCB-201ENST00000249269 WASHC2CQ9Y4E1 1318 aa19.62■□□□□ 0.73
PMPCB-201ENST00000249269 IFT140Q96RY7 1462 aa19.62■□□□□ 0.73
PMPCB-201ENST00000249269 ANAPC15P60006 121 aa19.61■□□□□ 0.73
PMPCB-201ENST00000249269 TMC1Q8TDI8 760 aa19.6■□□□□ 0.73
PMPCB-201ENST00000249269 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
PMPCB-201ENST00000249269 GPATCH8Q9UKJ3 1502 aaKnown RBP19.6■□□□□ 0.73
PMPCB-201ENST00000249269 PATL2C9JE40 543 aaKnown RBP19.59■□□□□ 0.73
PMPCB-201ENST00000249269 NEFMP07197 916 aa19.59■□□□□ 0.73
PMPCB-201ENST00000249269 LAMC1P11047 1609 aa19.58■□□□□ 0.73
PMPCB-201ENST00000249269 PLEKHH2Q8IVE3 1493 aa19.58■□□□□ 0.72
PMPCB-201ENST00000249269 CEP170Q5SW79 1584 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms