RNA–Protein interactions for RNA: ENSMUST00000222544.1

Trim27-206, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim27, Length 4,312 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-206ENSMUST00000222544 KnstrnQ9D9Z1 312 aaKnown RBP17.41■□□□□ 0.38
Trim27-206ENSMUST00000222544 Rad54l2Q99NG0 1466 aa17.4■□□□□ 0.38
Trim27-206ENSMUST00000222544 Prkrip1Q9CWV6 186 aaKnown RBP17.4■□□□□ 0.38
Trim27-206ENSMUST00000222544 Top2bQ64511 1612 aa17.39■□□□□ 0.38
Trim27-206ENSMUST00000222544 AqrQ8CFQ3 1481 aaKnown RBP17.39■□□□□ 0.37
Trim27-206ENSMUST00000222544 Tiam1Q60610 1591 aa17.39■□□□□ 0.37
Trim27-206ENSMUST00000222544 Dhx9O70133 1380 aaKnown RBP17.37■□□□□ 0.37
Trim27-206ENSMUST00000222544 Pank1Q8K4K6 548 aa17.37■□□□□ 0.37
Trim27-206ENSMUST00000222544 Birc3O08863 600 aa17.37■□□□□ 0.37
Trim27-206ENSMUST00000222544 Kif7B7ZNG0 1348 aa17.37■□□□□ 0.37
Trim27-206ENSMUST00000222544 Hsp90b1P08113 802 aaKnown RBP17.36■□□□□ 0.37
Trim27-206ENSMUST00000222544 Fam184bQ0KK56 942 aa17.36■□□□□ 0.37
Trim27-206ENSMUST00000222544 Mre11Q61216 706 aa17.36■□□□□ 0.37
Trim27-206ENSMUST00000222544 KarsQ99MN1 595 aaKnown RBP17.36■□□□□ 0.37
Trim27-206ENSMUST00000222544 Iqcf3Q9D498 203 aa17.36■□□□□ 0.37
Trim27-206ENSMUST00000222544 Znf316Q6PGE4 1016 aa17.34■□□□□ 0.37
Trim27-206ENSMUST00000222544 Ccdc30Q8BVF4 654 aa17.34■□□□□ 0.37
Trim27-206ENSMUST00000222544 CatipB9EKE5 520 aa17.34■□□□□ 0.37
Trim27-206ENSMUST00000222544 Ift140E9PY46 1464 aa17.33■□□□□ 0.36
Trim27-206ENSMUST00000222544 Pibf1E9Q6K3 756 aa17.33■□□□□ 0.36
Trim27-206ENSMUST00000222544 Rfx1P48377 963 aa17.33■□□□□ 0.36
Trim27-206ENSMUST00000222544 Tsen2Q6P7W5 460 aa17.31■□□□□ 0.36
Trim27-206ENSMUST00000222544 Cc2d2bA0A286YDU8 1405 aa17.31■□□□□ 0.36
Trim27-206ENSMUST00000222544 Txndc2Q6P902 515 aa17.31■□□□□ 0.36
Trim27-206ENSMUST00000222544 Mroh2bQ7M6Y6 1581 aa17.3■□□□□ 0.36
Trim27-206ENSMUST00000222544 Kif16bB1AVY7 1312 aa17.3■□□□□ 0.36
Trim27-206ENSMUST00000222544 Ttll5Q8CHB8 1328 aa17.3■□□□□ 0.36
Trim27-206ENSMUST00000222544 Casc1Q6TDU8 730 aa17.29■□□□□ 0.36
Trim27-206ENSMUST00000222544 Jph4Q80WT0 628 aa17.29■□□□□ 0.36
Trim27-206ENSMUST00000222544 NrkQ9R0G8 1455 aa17.29■□□□□ 0.36
Trim27-206ENSMUST00000222544 Efcab5A0JP43 1406 aa17.28■□□□□ 0.36
Trim27-206ENSMUST00000222544 Ccar1Q8CH18 1146 aaKnown RBP17.28■□□□□ 0.36
Trim27-206ENSMUST00000222544 Ccdc60Q8C4J0 545 aa17.28■□□□□ 0.36
Trim27-206ENSMUST00000222544 Ccdc146E9Q9F7 977 aa17.28■□□□□ 0.36
Trim27-206ENSMUST00000222544 Liat1Q810M6 228 aa17.28■□□□□ 0.36
Trim27-206ENSMUST00000222544 Usp40Q8BWR4 1235 aa17.27■□□□□ 0.36
Trim27-206ENSMUST00000222544 Ccdc183A2AJB1 534 aa17.27■□□□□ 0.35
Trim27-206ENSMUST00000222544 Dhx57Q6P5D3 1388 aaKnown RBP17.27■□□□□ 0.35
Trim27-206ENSMUST00000222544 Rtn4Q99P72 1162 aaKnown RBP17.26■□□□□ 0.35
Trim27-206ENSMUST00000222544 Soga1E1U8D0 1418 aa17.26■□□□□ 0.35
Trim27-206ENSMUST00000222544 Cux1P53564 1515 aa17.26■□□□□ 0.35
Trim27-206ENSMUST00000222544 Map3k1P53349 1493 aa17.25■□□□□ 0.35
Trim27-206ENSMUST00000222544 Psme1P97371 249 aa17.25■□□□□ 0.35
Trim27-206ENSMUST00000222544 Pcmtd1P59913 357 aa17.24■□□□□ 0.35
Trim27-206ENSMUST00000222544 Ylpm1Q9R0I7 1386 aaKnown RBP17.24■□□□□ 0.35
Trim27-206ENSMUST00000222544 Chmp4bQ9D8B3 224 aaKnown RBP17.23■□□□□ 0.35
Trim27-206ENSMUST00000222544 GsdmaQ9EST1 446 aa17.23■□□□□ 0.35
Trim27-206ENSMUST00000222544 Grin2bQ01097 1482 aa17.23■□□□□ 0.35
Trim27-206ENSMUST00000222544 Gm7298A0A0N4SVU1 1476 aa17.23■□□□□ 0.35
Trim27-206ENSMUST00000222544 TchhA0A0B4J1F9 1599 aa17.22■□□□□ 0.35
Trim27-206ENSMUST00000222544 Spag9Q58A65 1321 aaKnown RBP17.22■□□□□ 0.35
Trim27-206ENSMUST00000222544 Naip2Q9QUK4 1447 aa17.22■□□□□ 0.35
Trim27-206ENSMUST00000222544 Duox2A2AQ99 1517 aa17.22■□□□□ 0.35
Trim27-206ENSMUST00000222544 Nutm1Q8BHP2 1126 aa17.22■□□□□ 0.35
Trim27-206ENSMUST00000222544 Trim58Q5NCC9 485 aa17.21■□□□□ 0.35
Trim27-206ENSMUST00000222544 BicraF8VPZ9 1578 aa17.21■□□□□ 0.35
Trim27-206ENSMUST00000222544 Ralbp1Q62172 648 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 Ppp2r1aQ76MZ3 589 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 Pknox2Q8BG99 474 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 Tnnt1O88346 262 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 Pcf11G3X9Z4 1553 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 Plekhg5Q66T02 1073 aa17.2■□□□□ 0.34
Trim27-206ENSMUST00000222544 A2mQ6GQT1 1474 aa17.19■□□□□ 0.34
Trim27-206ENSMUST00000222544 HnrnpuQ8VEK3 800 aaKnown RBP17.19■□□□□ 0.34
Trim27-206ENSMUST00000222544 Sox12Q04890 314 aa17.18■□□□□ 0.34
Trim27-206ENSMUST00000222544 Naip5Q9R016 1403 aa17.18■□□□□ 0.34
Trim27-206ENSMUST00000222544 Nectin2P32507 530 aa17.18■□□□□ 0.34
Trim27-206ENSMUST00000222544 Ggt6Q6PDE7 497 aa17.17■□□□□ 0.34
Trim27-206ENSMUST00000222544 Tnpo1Q8BFY9 898 aaKnown RBP17.17■□□□□ 0.34
Trim27-206ENSMUST00000222544 Cc2d1aQ8K1A6 943 aa17.17■□□□□ 0.34
Trim27-206ENSMUST00000222544 Chmp4cQ9D7F7 232 aa17.17■□□□□ 0.34
Trim27-206ENSMUST00000222544 IbspQ61711 324 aa17.17■□□□□ 0.34
Trim27-206ENSMUST00000222544 Stk11ipQ3TAA7 1072 aa17.16■□□□□ 0.34
Trim27-206ENSMUST00000222544 Plekhh1Q80TI1 1356 aa17.16■□□□□ 0.34
Trim27-206ENSMUST00000222544 3425401B19RikD3Z1D3 1412 aa17.16■□□□□ 0.34
Trim27-206ENSMUST00000222544 Apaf1O88879 1249 aa17.15■□□□□ 0.34
Trim27-206ENSMUST00000222544 Znf692Q3U381 531 aa17.15■□□□□ 0.34
Trim27-206ENSMUST00000222544 Urb2E9Q7L1 1524 aaKnown RBP17.15■□□□□ 0.34
Trim27-206ENSMUST00000222544 Rrp12Q6P5B0 1295 aaKnown RBP17.15■□□□□ 0.34
Trim27-206ENSMUST00000222544 G3bp1P97855 465 aaKnown RBP17.13■□□□□ 0.33
Trim27-206ENSMUST00000222544 Tspyl2Q7TQI8 677 aa17.13■□□□□ 0.33
Trim27-206ENSMUST00000222544 Myom3A2ABU4 1439 aa17.13■□□□□ 0.33
Trim27-206ENSMUST00000222544 Rabep1O35551 862 aa17.12■□□□□ 0.33
Trim27-206ENSMUST00000222544 Rsph3aQ3UFY4 516 aa17.12■□□□□ 0.33
Trim27-206ENSMUST00000222544 Mink1Q9JM52 1308 aa17.11■□□□□ 0.33
Trim27-206ENSMUST00000222544 Ncoa1P70365 1447 aa17.11■□□□□ 0.33
Trim27-206ENSMUST00000222544 Ncoa2Q61026 1462 aa17.11■□□□□ 0.33
Trim27-206ENSMUST00000222544 MccE9PWI3 1003 aa17.11■□□□□ 0.33
Trim27-206ENSMUST00000222544 Utp14aQ640M1 767 aaKnown RBP17.11■□□□□ 0.33
Trim27-206ENSMUST00000222544 Pde4cQ3UEI1 686 aa17.1■□□□□ 0.33
Trim27-206ENSMUST00000222544 Slx4Q6P1D7 1565 aa17.1■□□□□ 0.33
Trim27-206ENSMUST00000222544 CgnP59242 1191 aa17.1■□□□□ 0.33
Trim27-206ENSMUST00000222544 Gpatch11Q3UFS4 262 aa17.1■□□□□ 0.33
Trim27-206ENSMUST00000222544 Rtf1A2AQ19 715 aaKnown RBP17.1■□□□□ 0.33
Trim27-206ENSMUST00000222544 Frmpd1A2AKB4 1549 aa17.09■□□□□ 0.33
Trim27-206ENSMUST00000222544 Q3TQI7 289 aaKnown RBP17.09■□□□□ 0.33
Trim27-206ENSMUST00000222544 Rsph4aQ8BYM7 716 aa17.08■□□□□ 0.33
Trim27-206ENSMUST00000222544 Map3k5O35099 1380 aa17.08■□□□□ 0.32
Trim27-206ENSMUST00000222544 PrxO55103 1391 aa17.07■□□□□ 0.32
Trim27-206ENSMUST00000222544 PogzQ8BZH4 1409 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms