RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 AI481877A2ALV5 1481 aa13.1□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Anp32bQ9EST5 272 aaKnown RBP13.09□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Kiaa1210E9Q0C6 1637 aa13.09□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Ifit1bl1D3Z6F0 470 aa13.09□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Nsd2Q8BVE8 1365 aa13.09□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Myom3A2ABU4 1439 aa13.09□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Znf608Q56A10 1511 aa13.09□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Smg6P61406 1418 aaKnown RBP13.07□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Mrs2Q5NCE8 434 aa13.07□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 PrkcshO08795 521 aa13.06□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 PtprgQ05909 1442 aa13.06□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 PtprtQ99M80 1454 aa13.06□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Gm32742A0A1B0GT42 1604 aa13.06□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Gm38655A0A286YDK6 273 aa13.05□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Kdm2aP59997 1161 aa13.05□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Stk24Q99KH8 431 aa13.05□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Ppp1r18Q8BQ30 594 aa13.05□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Abca8bQ8K440 1620 aa13.04□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Gm156Q58A37 223 aa13.04□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Trpm2Q91YD4 1506 aa13.04□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Mast1Q9R1L5 1570 aa13.03□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Atp7aQ64430 1491 aa13.03□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Rock1P70335 1354 aa13.03□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Supt6hQ62383 1726 aaKnown RBP13.03□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Kif21bQ9QXL1 1668 aa13.02□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Ncoa1P70365 1447 aa13.02□□□□□ -0.32
Sh3rf1-202ENSMUST00000209611 Abcc3B2RX12 1523 aa13.02□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Rock2P70336 1388 aa13.02□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Gm13695A2AK44 830 aa13.01□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Washc2Q6PGL7 1334 aa13.01□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Neurl4Q5NCX5 1563 aa13.01□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Csrnp3P59055 597 aa13□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 1700123L14RikQ3V2K7 440 aa13□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Wwc2Q6NXJ0 1187 aa13□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Polr3aB2RXC6 1390 aa13□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Gm20521D3Z5F7 333 aa13□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Hecw1Q8K4P8 1604 aa12.99□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 OvosQ3UU35 1456 aa12.99□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Srpk2O54781 681 aaKnown RBP12.98□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Cep170Q6A065 1588 aa12.98□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Mug2P28666 1451 aa12.98□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Plekhg5Q66T02 1073 aa12.97□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Exoc6Q8R313 802 aa12.97□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Asxl1P59598 1514 aa12.97□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Eif5bQ05D44 1216 aaKnown RBP12.97□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Kif14L0N7N1 1674 aaKnown RBP12.96□□□□□ -0.33
Sh3rf1-202ENSMUST00000209611 Plppr3Q7TPB0 716 aa12.96□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 ErbinQ80TH2 1402 aa12.95□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Ylpm1Q9R0I7 1386 aaKnown RBP12.95□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Ttc21bQ0HA38 1315 aa12.94□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Cpsf1Q9EPU4 1441 aaKnown RBP12.94□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Zfyve16Q80U44 1528 aa12.94□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Pprc1Q6NZN1 1644 aa12.93□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Srcin1Q9QWI6 1250 aa12.93□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Atp1b4Q99ME6 356 aa12.93□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Pdcd11Q6NS46 1862 aaKnown RBP12.92□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Cdc42bpbQ7TT50 1713 aa12.92□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Usp54Q8BL06 1588 aaKnown RBP12.92□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Cdk13Q69ZA1 1511 aaKnown RBP12.92□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Dot1lQ6XZL8 1540 aa12.91□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 RalgapbQ8BQZ4 1484 aa12.91□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Mbd5B1AYB6 1498 aa12.91□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Ppip5k1A2ARP1 1436 aa12.91□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Naip6Q9JIB6 1403 aa12.9□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Kif1bQ60575 1816 aaKnown RBP12.9□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Gtf2e1Q9D0D5 440 aa12.9□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Kidins220E9Q9B7 1793 aa12.9□□□□□ -0.34
Sh3rf1-202ENSMUST00000209611 Sall3Q62255 1320 aa12.89□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Znf518aB2RRF6 1478 aaKnown RBP12.89□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Fan1Q69ZT1 1020 aa12.88□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Nos1Q9Z0J4 1429 aa12.88□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Edc4Q3UJB9 1406 aaKnown RBP12.87□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Tarbp1E9Q368 1579 aa12.87□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Adgrl3Q80TS3 1537 aa12.87□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Stard8Q8K031 1019 aa12.87□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Tmf1B9EKI3 1091 aa12.86□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 4933416C03RikQ3V063 378 aa12.85□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Pank3Q8R2W9 370 aa12.85□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Znf710Q3U288 666 aa12.85□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 IqubQ8CDK3 788 aa12.85□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Rsph4aQ8BYM7 716 aa12.84□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Ptch1Q61115 1434 aa12.84□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Usp40Q8BWR4 1235 aa12.84□□□□□ -0.35
Sh3rf1-202ENSMUST00000209611 Stag3O70576 1240 aa12.83□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Slc4a2P13808 1237 aaKnown RBP12.83□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Abca9Q8K449 1623 aa12.83□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Gli2Q0VGT2 1544 aa12.83□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 PnisrA2AJT4 805 aaKnown RBP12.83□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Slc4a1apE9PX68 744 aa12.82□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Prdm10Q3UTQ7 1184 aa12.82□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Abcc6Q9R1S7 1498 aa12.82□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Aplp2Q06335 707 aa12.82□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Inpp5dQ9ES52 1191 aa12.82□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 ShprhQ7TPQ3 1674 aa12.82□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Arid4bA2CG63 1314 aaKnown RBP12.81□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Ofd1Q80Z25 1017 aa12.81□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Nlrp6Q91WS2 869 aa12.81□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Calr4Q3TQS0 420 aa12.8□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Robo2Q7TPD3 1470 aa12.79□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 P3h3Q8CG70 732 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms