RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Cgnl1Q6AW69 1298 aa18.54■□□□□ 0.56
Shank1-202ENSMUST00000107935 Ccar1Q8CH18 1146 aaKnown RBP18.54■□□□□ 0.56
Shank1-202ENSMUST00000107935 Ak7Q9D2H2 614 aa18.54■□□□□ 0.56
Shank1-202ENSMUST00000107935 Filip1lQ6P6L0 1131 aa18.53■□□□□ 0.56
Shank1-202ENSMUST00000107935 MyclP10166 368 aa18.53■□□□□ 0.56
Shank1-202ENSMUST00000107935 U2af1Q9D883 239 aaKnown RBP18.53■□□□□ 0.56
Shank1-202ENSMUST00000107935 Q8BT18 775 aa18.52■□□□□ 0.56
Shank1-202ENSMUST00000107935 Hmgn5Q9JL35 406 aa18.52■□□□□ 0.56
Shank1-202ENSMUST00000107935 EzrP26040 586 aaKnown RBP18.52■□□□□ 0.55
Shank1-202ENSMUST00000107935 Rrp7aQ9D1C9 280 aaKnown RBP18.52■□□□□ 0.55
Shank1-202ENSMUST00000107935 Sh3bgrQ9WUZ7 214 aa18.52■□□□□ 0.55
Shank1-202ENSMUST00000107935 Ecm2Q5FW85 670 aa18.52■□□□□ 0.55
Shank1-202ENSMUST00000107935 Brpf1B2RRD7 1212 aa18.51■□□□□ 0.55
Shank1-202ENSMUST00000107935 Gabpb2P81069 414 aa18.51■□□□□ 0.55
Shank1-202ENSMUST00000107935 Rabep1O35551 862 aa18.51■□□□□ 0.55
Shank1-202ENSMUST00000107935 Rufy1Q8BIJ7 712 aa18.51■□□□□ 0.55
Shank1-202ENSMUST00000107935 Smg6P61406 1418 aaKnown RBP18.5■□□□□ 0.55
Shank1-202ENSMUST00000107935 Ccdc146E9Q9F7 977 aa18.5■□□□□ 0.55
Shank1-202ENSMUST00000107935 Fam193aQ8CGI1 1231 aaKnown RBP18.5■□□□□ 0.55
Shank1-202ENSMUST00000107935 Ksr2Q3UVC0 959 aa18.5■□□□□ 0.55
Shank1-202ENSMUST00000107935 Polr3gQ6NXY9 223 aa18.49■□□□□ 0.55
Shank1-202ENSMUST00000107935 Pkd2O35245 966 aa18.49■□□□□ 0.55
Shank1-202ENSMUST00000107935 Ubap1lG3UW59 384 aa18.48■□□□□ 0.55
Shank1-202ENSMUST00000107935 Tpm4Q6IRU2 248 aa18.48■□□□□ 0.55
Shank1-202ENSMUST00000107935 BbxQ8VBW5 907 aa18.48■□□□□ 0.55
Shank1-202ENSMUST00000107935 Noc3lQ8VI84 807 aaKnown RBP18.47■□□□□ 0.55
Shank1-202ENSMUST00000107935 Def6Q8C2K1 630 aa18.47■□□□□ 0.55
Shank1-202ENSMUST00000107935 Dnai2A2AC93 623 aa18.46■□□□□ 0.55
Shank1-202ENSMUST00000107935 Eif4g2Q62448 906 aaKnown RBP18.45■□□□□ 0.54
Shank1-202ENSMUST00000107935 Phf14Q9D4H9 881 aa18.45■□□□□ 0.54
Shank1-202ENSMUST00000107935 Chaf1aQ9QWF0 911 aa18.44■□□□□ 0.54
Shank1-202ENSMUST00000107935 Cdkn1cP49919 348 aa18.44■□□□□ 0.54
Shank1-202ENSMUST00000107935 Q3TQI7 289 aaKnown RBP18.44■□□□□ 0.54
Shank1-202ENSMUST00000107935 KinQ8K339 391 aa18.44■□□□□ 0.54
Shank1-202ENSMUST00000107935 Plin1Q8CGN5 517 aa18.43■□□□□ 0.54
Shank1-202ENSMUST00000107935 Srek1Q8BZX4 494 aaKnown RBP18.43■□□□□ 0.54
Shank1-202ENSMUST00000107935 Ipo7Q9EPL8 1038 aaKnown RBP18.43■□□□□ 0.54
Shank1-202ENSMUST00000107935 Mns1Q61884 491 aa18.42■□□□□ 0.54
Shank1-202ENSMUST00000107935 Gcom1E9PZ54 550 aa18.42■□□□□ 0.54
Shank1-202ENSMUST00000107935 MyzapQ3UIJ9 466 aa18.42■□□□□ 0.54
Shank1-202ENSMUST00000107935 Dcaf11Q91VU6 549 aa18.42■□□□□ 0.54
Shank1-202ENSMUST00000107935 Kif16bB1AVY7 1312 aa18.42■□□□□ 0.54
Shank1-202ENSMUST00000107935 Ccdc47Q9D024 483 aaKnown RBP18.42■□□□□ 0.54
Shank1-202ENSMUST00000107935 Gtf2e1Q9D0D5 440 aa18.41■□□□□ 0.54
Shank1-202ENSMUST00000107935 Trim55G3X8Y1 545 aa18.41■□□□□ 0.54
Shank1-202ENSMUST00000107935 Rsph6aQ8CDR2 708 aa18.41■□□□□ 0.54
Shank1-202ENSMUST00000107935 Stard8Q8K031 1019 aa18.4■□□□□ 0.54
Shank1-202ENSMUST00000107935 Tnnt1O88346 262 aa18.4■□□□□ 0.54
Shank1-202ENSMUST00000107935 Bicd2Q921C5 820 aa18.39■□□□□ 0.54
Shank1-202ENSMUST00000107935 Rock2P70336 1388 aa18.39■□□□□ 0.53
Shank1-202ENSMUST00000107935 Ifit1bl1D3Z6F0 470 aa18.39■□□□□ 0.53
Shank1-202ENSMUST00000107935 Rsf1E9PWW9 1441 aaKnown RBP18.39■□□□□ 0.53
Shank1-202ENSMUST00000107935 Dctn1O08788 1281 aa18.38■□□□□ 0.53
Shank1-202ENSMUST00000107935 Nol10Q5RJG1 687 aaKnown RBP18.38■□□□□ 0.53
Shank1-202ENSMUST00000107935 A0A1L1SQF0 893 aa18.38■□□□□ 0.53
Shank1-202ENSMUST00000107935 Isy1Q69ZQ2 285 aaKnown RBP18.38■□□□□ 0.53
Shank1-202ENSMUST00000107935 Gps2Q921N8 327 aa18.37■□□□□ 0.53
Shank1-202ENSMUST00000107935 A0A0U1RNP2 1173 aa18.37■□□□□ 0.53
Shank1-202ENSMUST00000107935 NaspQ99MD9 773 aaKnown RBP18.37■□□□□ 0.53
Shank1-202ENSMUST00000107935 Baz1bQ9Z277 1479 aa18.36■□□□□ 0.53
Shank1-202ENSMUST00000107935 Fyco1Q8VDC1 1437 aa18.36■□□□□ 0.53
Shank1-202ENSMUST00000107935 Rnf214Q8BFU3 668 aaKnown RBP18.34■□□□□ 0.53
Shank1-202ENSMUST00000107935 Senp3Q9EP97 568 aaKnown RBP18.34■□□□□ 0.53
Shank1-202ENSMUST00000107935 Spag9Q58A65 1321 aaKnown RBP18.34■□□□□ 0.53
Shank1-202ENSMUST00000107935 Rec8Q8C5S7 591 aa18.34■□□□□ 0.53
Shank1-202ENSMUST00000107935 Mphosph9A6H5Y1 991 aa18.34■□□□□ 0.53
Shank1-202ENSMUST00000107935 Arhgap35Q91YM2 1499 aa18.34■□□□□ 0.53
Shank1-202ENSMUST00000107935 Paxip1Q6NZQ4 1056 aa18.33■□□□□ 0.53
Shank1-202ENSMUST00000107935 AampJ3QN89 436 aa18.33■□□□□ 0.52
Shank1-202ENSMUST00000107935 Gm21969J3QJZ1 289 aa18.33■□□□□ 0.52
Shank1-202ENSMUST00000107935 Prm3Q62100 101 aa18.32■□□□□ 0.52
Shank1-202ENSMUST00000107935 Znf526Q8BI66 675 aa18.32■□□□□ 0.52
Shank1-202ENSMUST00000107935 Hook1Q8BIL5 728 aa18.32■□□□□ 0.52
Shank1-202ENSMUST00000107935 Map4P27546 1125 aaKnown RBP18.32■□□□□ 0.52
Shank1-202ENSMUST00000107935 Arhgap27A2AB59 869 aa18.31■□□□□ 0.52
Shank1-202ENSMUST00000107935 Kif3cO35066 796 aa18.3■□□□□ 0.52
Shank1-202ENSMUST00000107935 PogkQ80TC5 607 aa18.29■□□□□ 0.52
Shank1-202ENSMUST00000107935 Fez1Q8K0X8 392 aa18.29■□□□□ 0.52
Shank1-202ENSMUST00000107935 Chmp3Q9CQ10 224 aa18.29■□□□□ 0.52
Shank1-202ENSMUST00000107935 Pak3Q61036 559 aa18.29■□□□□ 0.52
Shank1-202ENSMUST00000107935 Smc3Q9CW03 1217 aaKnown RBP18.29■□□□□ 0.52
Shank1-202ENSMUST00000107935 Mex3cQ05A36 652 aaKnown RBP18.29■□□□□ 0.52
Shank1-202ENSMUST00000107935 Gpatch3Q8BIY1 525 aa18.29■□□□□ 0.52
Shank1-202ENSMUST00000107935 Ccdc183A2AJB1 534 aa18.28■□□□□ 0.52
Shank1-202ENSMUST00000107935 Phactr2B1AVP0 632 aa18.28■□□□□ 0.52
Shank1-202ENSMUST00000107935 Kri1Q8VDQ9 704 aaKnown RBP18.27■□□□□ 0.52
Shank1-202ENSMUST00000107935 Slc4a10Q5DTL9 1118 aa18.27■□□□□ 0.52
Shank1-202ENSMUST00000107935 Ubxn4Q8VCH8 506 aa18.27■□□□□ 0.51
Shank1-202ENSMUST00000107935 Prkrip1Q9CWV6 186 aaKnown RBP18.27■□□□□ 0.51
Shank1-202ENSMUST00000107935 Birc3O08863 600 aa18.26■□□□□ 0.51
Shank1-202ENSMUST00000107935 Znf692Q3U381 531 aa18.26■□□□□ 0.51
Shank1-202ENSMUST00000107935 Ccdc60Q8C4J0 545 aa18.25■□□□□ 0.51
Shank1-202ENSMUST00000107935 Mad1l1Q9WTX8 717 aaKnown RBP18.25■□□□□ 0.51
Shank1-202ENSMUST00000107935 DmtnQ9WV69 405 aa18.25■□□□□ 0.51
Shank1-202ENSMUST00000107935 Hnrnpul1Q8VDM6 859 aaKnown RBP18.25■□□□□ 0.51
Shank1-202ENSMUST00000107935 Kif20aP97329 887 aa18.24■□□□□ 0.51
Shank1-202ENSMUST00000107935 Nop14Q8R3N1 860 aaKnown RBP18.24■□□□□ 0.51
Shank1-202ENSMUST00000107935 Evc2Q8K1G2 1220 aa18.23■□□□□ 0.51
Shank1-202ENSMUST00000107935 Hap1O35668 628 aa18.23■□□□□ 0.51
Shank1-202ENSMUST00000107935 Ccdc18Q640L5 1455 aa18.23■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 167.5 ms