RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Pde3bQ61409 1100 aa18.73■□□□□ 0.59
Chd3-201ENSMUST00000092971 Smarce1O54941 411 aaKnown RBP18.72■□□□□ 0.59
Chd3-201ENSMUST00000092971 Psme1P97371 249 aa18.72■□□□□ 0.59
Chd3-201ENSMUST00000092971 Map7d2A2AG50 781 aa18.72■□□□□ 0.59
Chd3-201ENSMUST00000092971 Spag9Q58A65 1321 aaKnown RBP18.71■□□□□ 0.59
Chd3-201ENSMUST00000092971 FosbP13346 338 aa18.7■□□□□ 0.58
Chd3-201ENSMUST00000092971 Rfx1P48377 963 aa18.7■□□□□ 0.58
Chd3-201ENSMUST00000092971 Utp3Q9JI13 469 aaKnown RBP18.7■□□□□ 0.58
Chd3-201ENSMUST00000092971 Ddrgk1Q80WW9 315 aa18.69■□□□□ 0.58
Chd3-201ENSMUST00000092971 Trak1Q6PD31 939 aa18.68■□□□□ 0.58
Chd3-201ENSMUST00000092971 Gm21969J3QJZ1 289 aa18.68■□□□□ 0.58
Chd3-201ENSMUST00000092971 AppP12023 770 aa18.68■□□□□ 0.58
Chd3-201ENSMUST00000092971 Gabpb2P81069 414 aa18.68■□□□□ 0.58
Chd3-201ENSMUST00000092971 Txndc2Q6P902 515 aa18.67■□□□□ 0.58
Chd3-201ENSMUST00000092971 Rsph6aQ8CDR2 708 aa18.66■□□□□ 0.58
Chd3-201ENSMUST00000092971 Cspp1B2RX88 1205 aa18.66■□□□□ 0.58
Chd3-201ENSMUST00000092971 Pak3Q61036 559 aa18.66■□□□□ 0.58
Chd3-201ENSMUST00000092971 MlecQ6ZQI3 291 aaKnown RBP18.65■□□□□ 0.58
Chd3-201ENSMUST00000092971 Paf1Q8K2T8 535 aa18.65■□□□□ 0.58
Chd3-201ENSMUST00000092971 Sh3bgrQ9WUZ7 214 aa18.63■□□□□ 0.57
Chd3-201ENSMUST00000092971 Ush1cQ9ES64 910 aa18.62■□□□□ 0.57
Chd3-201ENSMUST00000092971 Eif2s2Q99L45 331 aaKnown RBP18.61■□□□□ 0.57
Chd3-201ENSMUST00000092971 Ccar1Q8CH18 1146 aaKnown RBP18.61■□□□□ 0.57
Chd3-201ENSMUST00000092971 Nap1l3Q794H2 544 aa18.61■□□□□ 0.57
Chd3-201ENSMUST00000092971 Ccdc43Q9CR29 222 aaKnown RBP18.61■□□□□ 0.57
Chd3-201ENSMUST00000092971 Tpm4Q6IRU2 248 aa18.6■□□□□ 0.57
Chd3-201ENSMUST00000092971 Golga3P55937 1487 aa18.6■□□□□ 0.57
Chd3-201ENSMUST00000092971 Atp6v1dP57746 247 aa18.59■□□□□ 0.57
Chd3-201ENSMUST00000092971 Ciz1Q8VEH2 845 aa18.59■□□□□ 0.57
Chd3-201ENSMUST00000092971 Chrna2Q91X60 512 aa18.59■□□□□ 0.57
Chd3-201ENSMUST00000092971 Tpm1P58771 284 aa18.59■□□□□ 0.57
Chd3-201ENSMUST00000092971 Rsph3aQ3UFY4 516 aa18.59■□□□□ 0.57
Chd3-201ENSMUST00000092971 Ccdc47Q9D024 483 aaKnown RBP18.58■□□□□ 0.57
Chd3-201ENSMUST00000092971 Rsf1E9PWW9 1441 aaKnown RBP18.58■□□□□ 0.56
Chd3-201ENSMUST00000092971 Tpm2P58774 284 aa18.57■□□□□ 0.56
Chd3-201ENSMUST00000092971 Ccdc96Q9CR92 584 aa18.57■□□□□ 0.56
Chd3-201ENSMUST00000092971 Mia2Q91ZV0 1396 aa18.57■□□□□ 0.56
Chd3-201ENSMUST00000092971 Filip1lQ6P6L0 1131 aa18.57■□□□□ 0.56
Chd3-201ENSMUST00000092971 Dhx16G3X8X0 1044 aaKnown RBP18.56■□□□□ 0.56
Chd3-201ENSMUST00000092971 St18Q80TY4 1045 aa18.56■□□□□ 0.56
Chd3-201ENSMUST00000092971 Ccdc60Q8C4J0 545 aa18.56■□□□□ 0.56
Chd3-201ENSMUST00000092971 AcrbpQ3V140 540 aa18.55■□□□□ 0.56
Chd3-201ENSMUST00000092971 Nol12Q8BG17 217 aa18.55■□□□□ 0.56
Chd3-201ENSMUST00000092971 Bicd2Q921C5 820 aa18.55■□□□□ 0.56
Chd3-201ENSMUST00000092971 Phactr2B1AVP0 632 aa18.54■□□□□ 0.56
Chd3-201ENSMUST00000092971 Dixdc1Q80Y83 711 aa18.54■□□□□ 0.56
Chd3-201ENSMUST00000092971 Rock2P70336 1388 aa18.54■□□□□ 0.56
Chd3-201ENSMUST00000092971 Odf2A3KGV1 830 aaKnown RBP18.54■□□□□ 0.56
Chd3-201ENSMUST00000092971 Pnmal2G3X9N3 661 aa18.53■□□□□ 0.56
Chd3-201ENSMUST00000092971 Tsen2Q6P7W5 460 aa18.53■□□□□ 0.56
Chd3-201ENSMUST00000092971 Taf3Q5HZG4 932 aa18.51■□□□□ 0.55
Chd3-201ENSMUST00000092971 Ccp110Q7TSH4 1004 aa18.51■□□□□ 0.55
Chd3-201ENSMUST00000092971 Hnrnpul1Q8VDM6 859 aaKnown RBP18.51■□□□□ 0.55
Chd3-201ENSMUST00000092971 Ylpm1Q9R0I7 1386 aaKnown RBP18.51■□□□□ 0.55
Chd3-201ENSMUST00000092971 PrkcshO08795 521 aa18.5■□□□□ 0.55
Chd3-201ENSMUST00000092971 Casq1O09165 405 aa18.5■□□□□ 0.55
Chd3-201ENSMUST00000092971 Pknox2Q8BG99 474 aa18.5■□□□□ 0.55
Chd3-201ENSMUST00000092971 Rec8Q8C5S7 591 aa18.5■□□□□ 0.55
Chd3-201ENSMUST00000092971 Fan1Q69ZT1 1020 aa18.5■□□□□ 0.55
Chd3-201ENSMUST00000092971 Cabp1Q9JLK7 227 aa18.5■□□□□ 0.55
Chd3-201ENSMUST00000092971 Mphosph9A6H5Y1 991 aa18.5■□□□□ 0.55
Chd3-201ENSMUST00000092971 HdgfP51859 237 aaKnown RBP18.5■□□□□ 0.55
Chd3-201ENSMUST00000092971 Srcin1Q9QWI6 1250 aa18.49■□□□□ 0.55
Chd3-201ENSMUST00000092971 Nap1l1P28656 391 aaKnown RBP18.49■□□□□ 0.55
Chd3-201ENSMUST00000092971 Ccdc34Q3UI66 367 aa18.49■□□□□ 0.55
Chd3-201ENSMUST00000092971 Cabp4Q8VHC5 271 aa18.48■□□□□ 0.55
Chd3-201ENSMUST00000092971 Cplx1P63040 134 aa18.48■□□□□ 0.55
Chd3-201ENSMUST00000092971 Ipo7Q9EPL8 1038 aaKnown RBP18.48■□□□□ 0.55
Chd3-201ENSMUST00000092971 Triml2E9PW10 424 aa18.47■□□□□ 0.55
Chd3-201ENSMUST00000092971 Rufy1Q8BIJ7 712 aa18.46■□□□□ 0.55
Chd3-201ENSMUST00000092971 Mad1l1Q9WTX8 717 aaKnown RBP18.46■□□□□ 0.55
Chd3-201ENSMUST00000092971 Ripply1Q2WG77 201 aa18.46■□□□□ 0.55
Chd3-201ENSMUST00000092971 Tceal9Q9DD24 104 aa18.46■□□□□ 0.55
Chd3-201ENSMUST00000092971 Neurod6P48986 337 aa18.46■□□□□ 0.55
Chd3-201ENSMUST00000092971 March6Q6ZQ89 909 aa18.45■□□□□ 0.54
Chd3-201ENSMUST00000092971 Stk31Q99MW1 1018 aa18.45■□□□□ 0.54
Chd3-201ENSMUST00000092971 Ccdc18Q640L5 1455 aa18.45■□□□□ 0.54
Chd3-201ENSMUST00000092971 Rnf214Q8BFU3 668 aaKnown RBP18.44■□□□□ 0.54
Chd3-201ENSMUST00000092971 Sycp1Q62209 993 aa18.44■□□□□ 0.54
Chd3-201ENSMUST00000092971 Gtf2f1Q3THK3 508 aaKnown RBP18.43■□□□□ 0.54
Chd3-201ENSMUST00000092971 Znhit6Q3UFB2 460 aaKnown RBP18.43■□□□□ 0.54
Chd3-201ENSMUST00000092971 Stk11ipQ3TAA7 1072 aa18.43■□□□□ 0.54
Chd3-201ENSMUST00000092971 PogkQ80TC5 607 aa18.43■□□□□ 0.54
Chd3-201ENSMUST00000092971 Kif3bQ61771 747 aa18.43■□□□□ 0.54
Chd3-201ENSMUST00000092971 Kif27Q7M6Z4 1394 aa18.42■□□□□ 0.54
Chd3-201ENSMUST00000092971 Ak7Q9D2H2 614 aa18.42■□□□□ 0.54
Chd3-201ENSMUST00000092971 Erich4Q3UNU4 136 aa18.42■□□□□ 0.54
Chd3-201ENSMUST00000092971 BcanQ61361 883 aa18.42■□□□□ 0.54
Chd3-201ENSMUST00000092971 Utp14aQ640M1 767 aaKnown RBP18.41■□□□□ 0.54
Chd3-201ENSMUST00000092971 Pank3Q8R2W9 370 aa18.41■□□□□ 0.54
Chd3-201ENSMUST00000092971 Gripap1Q8VD04 806 aa18.41■□□□□ 0.54
Chd3-201ENSMUST00000092971 AknaQ80VW7 1404 aa18.4■□□□□ 0.54
Chd3-201ENSMUST00000092971 Cplx2P84086 134 aa18.4■□□□□ 0.54
Chd3-201ENSMUST00000092971 Kif4P33174 1231 aa18.4■□□□□ 0.54
Chd3-201ENSMUST00000092971 G3bp1P97855 465 aaKnown RBP18.4■□□□□ 0.54
Chd3-201ENSMUST00000092971 Srek1Q8BZX4 494 aaKnown RBP18.4■□□□□ 0.54
Chd3-201ENSMUST00000092971 Ap3b2Q9JME5 1082 aa18.4■□□□□ 0.54
Chd3-201ENSMUST00000092971 Zrsr2Q62377 462 aaKnown RBP18.39■□□□□ 0.54
Chd3-201ENSMUST00000092971 Pdcl3Q8BVF2 240 aa18.39■□□□□ 0.54
Chd3-201ENSMUST00000092971 Ralbp1Q62172 648 aa18.39■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms