RNA–Protein interactions for RNA: ENSMUST00000060092.12

Upf2-201, Transcript of UPF2 regulator of nonsense transcripts homolog (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf2, Length 5,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf2-201ENSMUST00000060092 Kidins220E9Q9B7 1793 aa13.9□□□□□ -0.18
Upf2-201ENSMUST00000060092 Pkd2O35245 966 aa13.9□□□□□ -0.18
Upf2-201ENSMUST00000060092 Cd109Q8R422 1442 aa13.89□□□□□ -0.19
Upf2-201ENSMUST00000060092 Kdm5cP41230 1554 aa13.88□□□□□ -0.19
Upf2-201ENSMUST00000060092 Stk24Q99KH8 431 aa13.88□□□□□ -0.19
Upf2-201ENSMUST00000060092 Cdc42bpgQ80UW5 1551 aa13.88□□□□□ -0.19
Upf2-201ENSMUST00000060092 Dip2cE9PWR4 1557 aa13.87□□□□□ -0.19
Upf2-201ENSMUST00000060092 Afap1Q80YS6 731 aa13.87□□□□□ -0.19
Upf2-201ENSMUST00000060092 Mroh3A0A1D5RM54 893 aa13.87□□□□□ -0.19
Upf2-201ENSMUST00000060092 Ssh2Q5SW75 1423 aa13.87□□□□□ -0.19
Upf2-201ENSMUST00000060092 Nos1Q9Z0J4 1429 aa13.87□□□□□ -0.19
Upf2-201ENSMUST00000060092 Adgrb2Q8CGM1 1561 aa13.87□□□□□ -0.19
Upf2-201ENSMUST00000060092 Eid3Q3V124 375 aa13.85□□□□□ -0.19
Upf2-201ENSMUST00000060092 P3h3Q8CG70 732 aa13.85□□□□□ -0.19
Upf2-201ENSMUST00000060092 Kiaa0556Q8C753 1610 aa13.85□□□□□ -0.19
Upf2-201ENSMUST00000060092 ErbinQ80TH2 1402 aa13.85□□□□□ -0.19
Upf2-201ENSMUST00000060092 RereQ80TZ9 1558 aa13.85□□□□□ -0.19
Upf2-201ENSMUST00000060092 Talpid3E9PV87 1520 aa13.85□□□□□ -0.19
Upf2-201ENSMUST00000060092 Ylpm1Q9R0I7 1386 aaKnown RBP13.85□□□□□ -0.19
Upf2-201ENSMUST00000060092 Myom3A2ABU4 1439 aa13.85□□□□□ -0.19
Upf2-201ENSMUST00000060092 Uggt2E9Q4X2 1504 aa13.84□□□□□ -0.19
Upf2-201ENSMUST00000060092 Fhod3Q76LL6 1578 aa13.84□□□□□ -0.19
Upf2-201ENSMUST00000060092 Pdcd11Q6NS46 1862 aaKnown RBP13.84□□□□□ -0.19
Upf2-201ENSMUST00000060092 Wdr66E9Q743 1299 aa13.82□□□□□ -0.2
Upf2-201ENSMUST00000060092 Ttll5Q8CHB8 1328 aa13.82□□□□□ -0.2
Upf2-201ENSMUST00000060092 Usp54Q8BL06 1588 aaKnown RBP13.81□□□□□ -0.2
Upf2-201ENSMUST00000060092 Cfap65Q3V0B4 1847 aa13.81□□□□□ -0.2
Upf2-201ENSMUST00000060092 DroshaQ5HZJ0 1373 aaKnown RBP13.81□□□□□ -0.2
Upf2-201ENSMUST00000060092 Srpk2O54781 681 aaKnown RBP13.8□□□□□ -0.2
Upf2-201ENSMUST00000060092 Rgl3Q3UYI5 709 aa13.8□□□□□ -0.2
Upf2-201ENSMUST00000060092 Cdc42bpbQ7TT50 1713 aa13.8□□□□□ -0.2
Upf2-201ENSMUST00000060092 Kif1bQ60575 1816 aaKnown RBP13.8□□□□□ -0.2
Upf2-201ENSMUST00000060092 Yeats2Q3TUF7 1407 aa13.8□□□□□ -0.2
Upf2-201ENSMUST00000060092 Naip6Q9JIB6 1403 aa13.8□□□□□ -0.2
Upf2-201ENSMUST00000060092 Ttc21bQ0HA38 1315 aa13.79□□□□□ -0.2
Upf2-201ENSMUST00000060092 Zmym4A2A791 1549 aaKnown RBP13.79□□□□□ -0.2
Upf2-201ENSMUST00000060092 Psme1P97371 249 aa13.79□□□□□ -0.2
Upf2-201ENSMUST00000060092 Txndc2Q6P902 515 aa13.77□□□□□ -0.2
Upf2-201ENSMUST00000060092 GphnQ8BUV3 769 aaKnown RBP13.77□□□□□ -0.2
Upf2-201ENSMUST00000060092 Zfp644E9QA22 1323 aa13.77□□□□□ -0.2
Upf2-201ENSMUST00000060092 IqubQ8CDK3 788 aa13.77□□□□□ -0.21
Upf2-201ENSMUST00000060092 Arid4bA2CG63 1314 aaKnown RBP13.76□□□□□ -0.21
Upf2-201ENSMUST00000060092 Trpm2Q91YD4 1506 aa13.75□□□□□ -0.21
Upf2-201ENSMUST00000060092 PtprgQ05909 1442 aa13.73□□□□□ -0.21
Upf2-201ENSMUST00000060092 Usp47Q8BY87 1376 aa13.73□□□□□ -0.21
Upf2-201ENSMUST00000060092 Gm20521D3Z5F7 333 aa13.73□□□□□ -0.21
Upf2-201ENSMUST00000060092 Supt6hQ62383 1726 aaKnown RBP13.73□□□□□ -0.21
Upf2-201ENSMUST00000060092 Abca17E9PX95 1733 aa13.72□□□□□ -0.21
Upf2-201ENSMUST00000060092 Cyb5rlB1AS42 316 aa13.71□□□□□ -0.21
Upf2-201ENSMUST00000060092 AlkP97793 1621 aa13.71□□□□□ -0.21
Upf2-201ENSMUST00000060092 Lamc1P02468 1607 aaKnown RBP13.71□□□□□ -0.21
Upf2-201ENSMUST00000060092 Hfm1D3Z4R1 1434 aa13.71□□□□□ -0.22
Upf2-201ENSMUST00000060092 Topbp1Q6ZQF0 1515 aa13.7□□□□□ -0.22
Upf2-201ENSMUST00000060092 Naip5Q9R016 1403 aa13.7□□□□□ -0.22
Upf2-201ENSMUST00000060092 Myo5cE9Q1F5 1742 aa13.69□□□□□ -0.22
Upf2-201ENSMUST00000060092 Trpm1Q2TV84 1622 aa13.68□□□□□ -0.22
Upf2-201ENSMUST00000060092 Xrn1P97789 1719 aaKnown RBP13.68□□□□□ -0.22
Upf2-201ENSMUST00000060092 Abcc6Q9R1S7 1498 aa13.68□□□□□ -0.22
Upf2-201ENSMUST00000060092 Stard8Q8K031 1019 aa13.68□□□□□ -0.22
Upf2-201ENSMUST00000060092 Hspa5P20029 655 aaKnown RBP13.67□□□□□ -0.22
Upf2-201ENSMUST00000060092 Atp7aQ64430 1491 aa13.67□□□□□ -0.22
Upf2-201ENSMUST00000060092 Myom2Q14BI5 1463 aa13.67□□□□□ -0.22
Upf2-201ENSMUST00000060092 Kdm2aP59997 1161 aa13.66□□□□□ -0.22
Upf2-201ENSMUST00000060092 Rock1P70335 1354 aa13.66□□□□□ -0.22
Upf2-201ENSMUST00000060092 Ifit1bl1D3Z6F0 470 aa13.65□□□□□ -0.22
Upf2-201ENSMUST00000060092 Efcab6Q6P1E8 1516 aa13.65□□□□□ -0.22
Upf2-201ENSMUST00000060092 Grwd1Q810D6 446 aaKnown RBP13.64□□□□□ -0.23
Upf2-201ENSMUST00000060092 CltcQ68FD5 1675 aaKnown RBP13.64□□□□□ -0.23
Upf2-201ENSMUST00000060092 Pik3c2gO70167 1506 aa13.64□□□□□ -0.23
Upf2-201ENSMUST00000060092 Dhx9O70133 1380 aaKnown RBP13.63□□□□□ -0.23
Upf2-201ENSMUST00000060092 Qser1A2BIE1 1698 aa13.63□□□□□ -0.23
Upf2-201ENSMUST00000060092 Ppip5k1A2ARP1 1436 aa13.62□□□□□ -0.23
Upf2-201ENSMUST00000060092 Card11Q8CIS0 1159 aa13.62□□□□□ -0.23
Upf2-201ENSMUST00000060092 Stag3O70576 1240 aa13.61□□□□□ -0.23
Upf2-201ENSMUST00000060092 ShprhQ7TPQ3 1674 aa13.61□□□□□ -0.23
Upf2-201ENSMUST00000060092 Cwc22Q8C5N3 908 aaKnown RBP13.61□□□□□ -0.23
Upf2-201ENSMUST00000060092 Abca6Q8K441 1624 aa13.61□□□□□ -0.23
Upf2-201ENSMUST00000060092 Anp32bQ9EST5 272 aaKnown RBP13.6□□□□□ -0.23
Upf2-201ENSMUST00000060092 Adamts7Q68SA9 1657 aa13.59□□□□□ -0.23
Upf2-201ENSMUST00000060092 Slc24a1Q91WD8 1130 aa13.59□□□□□ -0.23
Upf2-201ENSMUST00000060092 Rprd2Q6NXI6 1469 aaKnown RBP13.58□□□□□ -0.23
Upf2-201ENSMUST00000060092 Prex1Q69ZK0 1650 aa13.58□□□□□ -0.24
Upf2-201ENSMUST00000060092 Shq1Q7TMX5 569 aa13.58□□□□□ -0.24
Upf2-201ENSMUST00000060092 Knl1Q66JQ7 1612 aa13.57□□□□□ -0.24
Upf2-201ENSMUST00000060092 Slc52a2Q9D8F3 450 aa13.57□□□□□ -0.24
Upf2-201ENSMUST00000060092 Gtf2e1Q9D0D5 440 aa13.57□□□□□ -0.24
Upf2-201ENSMUST00000060092 Akap12Q9WTQ5 1684 aa13.56□□□□□ -0.24
Upf2-201ENSMUST00000060092 Alpk3Q924C5 1678 aa13.55□□□□□ -0.24
Upf2-201ENSMUST00000060092 Adgrb3Q80ZF8 1522 aa13.55□□□□□ -0.24
Upf2-201ENSMUST00000060092 Kif21bQ9QXL1 1668 aa13.54□□□□□ -0.24
Upf2-201ENSMUST00000060092 AnkarA2RT91 1465 aa13.54□□□□□ -0.24
Upf2-201ENSMUST00000060092 Skint5A7XUY5 1461 aa13.53□□□□□ -0.24
Upf2-201ENSMUST00000060092 Robo2Q7TPD3 1470 aa13.53□□□□□ -0.24
Upf2-201ENSMUST00000060092 CenpjQ569L8 1344 aa13.52□□□□□ -0.24
Upf2-201ENSMUST00000060092 Tarbp1E9Q368 1579 aa13.52□□□□□ -0.25
Upf2-201ENSMUST00000060092 Rundc1Q0VDN7 615 aa13.52□□□□□ -0.25
Upf2-201ENSMUST00000060092 Rock2P70336 1388 aa13.52□□□□□ -0.25
Upf2-201ENSMUST00000060092 Fan1Q69ZT1 1020 aa13.51□□□□□ -0.25
Upf2-201ENSMUST00000060092 Pip4k2bQ80XI4 416 aa13.51□□□□□ -0.25
Upf2-201ENSMUST00000060092 Cul9Q80TT8 1865 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms