RNA–Protein interactions for RNA: ENSMUST00000060092.12

Upf2-201, Transcript of UPF2 regulator of nonsense transcripts homolog (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf2, Length 5,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf2-201ENSMUST00000060092 NischQ80TM9 1593 aa20.16■□□□□ 0.82
Upf2-201ENSMUST00000060092 Gm35339A0A140LHH9 1649 aa19.98■□□□□ 0.79
Upf2-201ENSMUST00000060092 Abcc9P70170 1546 aa19.41■□□□□ 0.7
Upf2-201ENSMUST00000060092 Abcc8B2RUS7 1588 aa19.21■□□□□ 0.67
Upf2-201ENSMUST00000060092 Rhox8Q6VSS7 320 aa18.41■□□□□ 0.54
Upf2-201ENSMUST00000060092 ScribQ80U72 1612 aa18.07■□□□□ 0.48
Upf2-201ENSMUST00000060092 NacadQ5SWP3 1504 aa18.05■□□□□ 0.48
Upf2-201ENSMUST00000060092 Dcaf1Q80TR8 1506 aa17.91■□□□□ 0.46
Upf2-201ENSMUST00000060092 Kdm5dQ62240 1548 aa17.84■□□□□ 0.45
Upf2-201ENSMUST00000060092 Rb1cc1Q9ESK9 1588 aa17.65■□□□□ 0.42
Upf2-201ENSMUST00000060092 Sycp2Q9CUU3 1500 aa17.53■□□□□ 0.4
Upf2-201ENSMUST00000060092 Baz1aO88379 1555 aa17.41■□□□□ 0.38
Upf2-201ENSMUST00000060092 Ccdc180J3QNE4 1664 aa17.38■□□□□ 0.37
Upf2-201ENSMUST00000060092 Zcchc6Q5BLK4 1491 aaKnown RBP17.34■□□□□ 0.37
Upf2-201ENSMUST00000060092 Crybg2B7ZCC2 1516 aa17.25■□□□□ 0.35
Upf2-201ENSMUST00000060092 Rtl1Q7M732 1744 aa17.2■□□□□ 0.34
Upf2-201ENSMUST00000060092 Pds5bQ4VA53 1446 aaKnown RBP17■□□□□ 0.31
Upf2-201ENSMUST00000060092 BicraF8VPZ9 1578 aa16.94■□□□□ 0.3
Upf2-201ENSMUST00000060092 Trim41Q5NCC3 630 aa16.92■□□□□ 0.3
Upf2-201ENSMUST00000060092 Ccdc136Q3TVA9 1136 aa16.9■□□□□ 0.3
Upf2-201ENSMUST00000060092 Ercc6F8VPZ5 1481 aa16.83■□□□□ 0.28
Upf2-201ENSMUST00000060092 Esf1Q3V1V3 845 aaKnown RBP16.82■□□□□ 0.28
Upf2-201ENSMUST00000060092 Smarca2Q6DIC0 1577 aa16.78■□□□□ 0.28
Upf2-201ENSMUST00000060092 Brd4Q9ESU6 1400 aaKnown RBP16.77■□□□□ 0.27
Upf2-201ENSMUST00000060092 Atad2bE9Q166 1460 aaKnown RBP16.75■□□□□ 0.27
Upf2-201ENSMUST00000060092 Smarca4Q3TKT4 1613 aaKnown RBP16.71■□□□□ 0.27
Upf2-201ENSMUST00000060092 Iqgap2Q3UQ44 1575 aa16.53■□□□□ 0.24
Upf2-201ENSMUST00000060092 Cngb1E1AZ71 1325 aa16.53■□□□□ 0.24
Upf2-201ENSMUST00000060092 Cecr2E9Q2Z1 1453 aa16.49■□□□□ 0.23
Upf2-201ENSMUST00000060092 Cttnbp2B9EJA2 1648 aa16.44■□□□□ 0.22
Upf2-201ENSMUST00000060092 CftrP26361 1476 aa16.35■□□□□ 0.21
Upf2-201ENSMUST00000060092 Phldb1Q6PDH0 1371 aaKnown RBP16.34■□□□□ 0.21
Upf2-201ENSMUST00000060092 Ubl4bQ9CQ84 188 aa16.34■□□□□ 0.21
Upf2-201ENSMUST00000060092 Synj1Q8CHC4 1574 aa16.32■□□□□ 0.2
Upf2-201ENSMUST00000060092 Thoc2B1AZI6 1594 aaKnown RBP16.31■□□□□ 0.2
Upf2-201ENSMUST00000060092 Baz1bQ9Z277 1479 aa16.28■□□□□ 0.2
Upf2-201ENSMUST00000060092 Wdr62Q3U3T8 1523 aa16.26■□□□□ 0.19
Upf2-201ENSMUST00000060092 Rsf1E9PWW9 1441 aaKnown RBP16.24■□□□□ 0.19
Upf2-201ENSMUST00000060092 Cc2d2aQ8CFW7 1633 aa16.21■□□□□ 0.19
Upf2-201ENSMUST00000060092 Frmpd1A2AKB4 1549 aa16.2■□□□□ 0.18
Upf2-201ENSMUST00000060092 Npm1Q61937 292 aaKnown RBP16.15■□□□□ 0.18
Upf2-201ENSMUST00000060092 Golga3P55937 1487 aa16.15■□□□□ 0.18
Upf2-201ENSMUST00000060092 Fam135aQ6NS59 1506 aa16.14■□□□□ 0.17
Upf2-201ENSMUST00000060092 Kif15Q6P9L6 1387 aa16.1■□□□□ 0.17
Upf2-201ENSMUST00000060092 Il27Q8K3I6 234 aa16.03■□□□□ 0.16
Upf2-201ENSMUST00000060092 Ccdc18Q640L5 1455 aa16.02■□□□□ 0.15
Upf2-201ENSMUST00000060092 Cep164Q5DU05 1446 aa16■□□□□ 0.15
Upf2-201ENSMUST00000060092 HrcG5E8J6 738 aa15.98■□□□□ 0.15
Upf2-201ENSMUST00000060092 Dnajc5bQ9CQ94 199 aa15.96■□□□□ 0.15
Upf2-201ENSMUST00000060092 Mrc2Q64449 1479 aa15.95■□□□□ 0.14
Upf2-201ENSMUST00000060092 Fmn1Q05860 1466 aa15.92■□□□□ 0.14
Upf2-201ENSMUST00000060092 Cux2P70298 1426 aa15.91■□□□□ 0.14
Upf2-201ENSMUST00000060092 Npm2Q80W85 207 aa15.91■□□□□ 0.14
Upf2-201ENSMUST00000060092 Zeb1Q64318 1117 aa15.9■□□□□ 0.14
Upf2-201ENSMUST00000060092 Lamc3Q9R0B6 1581 aa15.83■□□□□ 0.12
Upf2-201ENSMUST00000060092 Top2bQ64511 1612 aa15.79■□□□□ 0.12
Upf2-201ENSMUST00000060092 Unc13aQ4KUS2 1712 aa15.75■□□□□ 0.11
Upf2-201ENSMUST00000060092 Gab3Q8BSM5 595 aa15.72■□□□□ 0.11
Upf2-201ENSMUST00000060092 TnnQ80Z71 1560 aa15.63■□□□□ 0.09
Upf2-201ENSMUST00000060092 LrpprcQ6PB66 1392 aaKnown RBP15.62■□□□□ 0.09
Upf2-201ENSMUST00000060092 Camsap1A2AHC3 1581 aa15.59■□□□□ 0.09
Upf2-201ENSMUST00000060092 Dhx29Q6PGC1 1365 aaKnown RBP15.58■□□□□ 0.08
Upf2-201ENSMUST00000060092 Chic1Q8CBW7 227 aa15.58■□□□□ 0.08
Upf2-201ENSMUST00000060092 Myt1lP97500 1187 aa15.53■□□□□ 0.08
Upf2-201ENSMUST00000060092 Ccdc88bQ4QRL3 1481 aa15.53■□□□□ 0.08
Upf2-201ENSMUST00000060092 Crocc2F6XLV1 1638 aa15.51■□□□□ 0.07
Upf2-201ENSMUST00000060092 Top2aQ01320 1528 aaKnown RBP15.51■□□□□ 0.07
Upf2-201ENSMUST00000060092 Kif21aQ9QXL2 1672 aa15.5■□□□□ 0.07
Upf2-201ENSMUST00000060092 PogzQ8BZH4 1409 aaKnown RBP15.48■□□□□ 0.07
Upf2-201ENSMUST00000060092 Grin2bQ01097 1482 aa15.46■□□□□ 0.07
Upf2-201ENSMUST00000060092 Urb2E9Q7L1 1524 aaKnown RBP15.46■□□□□ 0.06
Upf2-201ENSMUST00000060092 Ift140E9PY46 1464 aa15.45■□□□□ 0.06
Upf2-201ENSMUST00000060092 Efcab5A0JP43 1406 aa15.44■□□□□ 0.06
Upf2-201ENSMUST00000060092 NrkQ9R0G8 1455 aa15.43■□□□□ 0.06
Upf2-201ENSMUST00000060092 Duox2A2AQ99 1517 aa15.41■□□□□ 0.06
Upf2-201ENSMUST00000060092 Lrriq1Q0P5X1 1673 aa15.38■□□□□ 0.05
Upf2-201ENSMUST00000060092 Shroom4Q1W617 1475 aa15.37■□□□□ 0.05
Upf2-201ENSMUST00000060092 Plb1Q3TTY0 1478 aa15.37■□□□□ 0.05
Upf2-201ENSMUST00000060092 Eif4g3Q80XI3 1579 aaKnown RBP15.3■□□□□ 0.04
Upf2-201ENSMUST00000060092 Pelp1Q9DBD5 1123 aaKnown RBP15.3■□□□□ 0.04
Upf2-201ENSMUST00000060092 Pbrm1Q8BSQ9 1634 aaKnown RBP15.29■□□□□ 0.04
Upf2-201ENSMUST00000060092 Cc2d2bA0A286YDU8 1405 aa15.27■□□□□ 0.04
Upf2-201ENSMUST00000060092 Clip1Q922J3 1391 aa15.24■□□□□ 0.03
Upf2-201ENSMUST00000060092 Rapgef2Q8CHG7 1496 aa15.22■□□□□ 0.03
Upf2-201ENSMUST00000060092 Carmil1Q6EDY6 1374 aa15.22■□□□□ 0.03
Upf2-201ENSMUST00000060092 Polr1aO35134 1717 aaKnown RBP15.2■□□□□ 0.02
Upf2-201ENSMUST00000060092 SynmQ70IV5 1561 aa15.19■□□□□ 0.02
Upf2-201ENSMUST00000060092 Cep162Q6ZQ06 1403 aa15.19■□□□□ 0.02
Upf2-201ENSMUST00000060092 Pabpn1Q8CCS6 302 aaKnown RBP15.18■□□□□ 0.02
Upf2-201ENSMUST00000060092 Map3k1P53349 1493 aa15.17■□□□□ 0.02
Upf2-201ENSMUST00000060092 Rad54l2Q99NG0 1466 aa15.16■□□□□ 0.02
Upf2-201ENSMUST00000060092 Rusc2Q80U22 1514 aa15.16■□□□□ 0.02
Upf2-201ENSMUST00000060092 Rpap1Q80TE0 1409 aa15.16■□□□□ 0.02
Upf2-201ENSMUST00000060092 Arhgap27A2AB59 869 aa15.15■□□□□ 0.02
Upf2-201ENSMUST00000060092 AqrQ8CFQ3 1481 aaKnown RBP15.12■□□□□ 0.01
Upf2-201ENSMUST00000060092 Grin2aP35436 1464 aa15.12■□□□□ 0.01
Upf2-201ENSMUST00000060092 Mroh2bQ7M6Y6 1581 aa15.11■□□□□ 0.01
Upf2-201ENSMUST00000060092 Samd9lQ69Z37 1561 aa15.11■□□□□ 0.01
Upf2-201ENSMUST00000060092 AknaQ80VW7 1404 aa15.1■□□□□ 0.01
Upf2-201ENSMUST00000060092 Disp1Q3TDN0 1521 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 80 ms