RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Exoc6Q8R313 802 aa23.3■■□□□ 1.32
Sec61a1-201ENSMUST00000032168 Clstn2Q9ER65 966 aa23.3■■□□□ 1.32
Sec61a1-201ENSMUST00000032168 Pdcd11Q6NS46 1862 aaKnown RBP23.3■■□□□ 1.32
Sec61a1-201ENSMUST00000032168 Spag9Q58A65 1321 aaKnown RBP23.29■■□□□ 1.32
Sec61a1-201ENSMUST00000032168 Washc2Q6PGL7 1334 aa23.29■■□□□ 1.32
Sec61a1-201ENSMUST00000032168 Myom3A2ABU4 1439 aa23.27■■□□□ 1.32
Sec61a1-201ENSMUST00000032168 Ythdc2B2RR83 1445 aaKnown RBP23.27■■□□□ 1.32
Sec61a1-201ENSMUST00000032168 Atp7aQ64430 1491 aa23.27■■□□□ 1.32
Sec61a1-201ENSMUST00000032168 Abca8bQ8K440 1620 aa23.26■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 Cwc22Q8C5N3 908 aaKnown RBP23.26■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 Cfap74Q3UY96 1578 aa23.25■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 Slc4a2P13808 1237 aaKnown RBP23.25■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 Mast1Q9R1L5 1570 aa23.24■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 Naip6Q9JIB6 1403 aa23.23■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 Pde4cQ3UEI1 686 aa23.23■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 Abcc3B2RX12 1523 aa23.23■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 Gm13695A2AK44 830 aa23.22■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 Kiaa1210E9Q0C6 1637 aa23.21■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 AI481877A2ALV5 1481 aa23.21■■□□□ 1.31
Sec61a1-201ENSMUST00000032168 Erich6D3Z6S9 713 aa23.2■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 DroshaQ5HZJ0 1373 aaKnown RBP23.19■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 Tarbp1E9Q368 1579 aa23.19■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 PtprtQ99M80 1454 aa23.19■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 Ifit1bl1D3Z6F0 470 aa23.17■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 Kidins220E9Q9B7 1793 aa23.17■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 RalgapbQ8BQZ4 1484 aa23.17■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 Plekhg5Q66T02 1073 aa23.17■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 Prdm16A2A935 1275 aa23.16■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 Eif5bQ05D44 1216 aaKnown RBP23.16■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 Polr3aB2RXC6 1390 aa23.15■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 Rock1P70335 1354 aa23.14■■□□□ 1.3
Sec61a1-201ENSMUST00000032168 Cpsf1Q9EPU4 1441 aaKnown RBP23.14■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 NrdcQ8BHG1 1161 aa23.14■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 Hecw1Q8K4P8 1604 aa23.14■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 Igf1rQ60751 1373 aa23.14■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 Iqgap1Q9JKF1 1657 aaKnown RBP23.13■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 Neurl4Q5NCX5 1563 aa23.11■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 Usp54Q8BL06 1588 aaKnown RBP23.1■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 Kif3bQ61771 747 aa23.1■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 Mroh3A0A1D5RM54 893 aa23.09■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 Sall3Q62255 1320 aa23.08■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 PnisrA2AJT4 805 aaKnown RBP23.08■■□□□ 1.29
Sec61a1-201ENSMUST00000032168 Gapvd1Q6PAR5 1458 aa23.06■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 P3h3Q8CG70 732 aa23.05■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 ShprhQ7TPQ3 1674 aa23.05■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 Edc4Q3UJB9 1406 aaKnown RBP23.05■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 Kif1bQ60575 1816 aaKnown RBP23.04■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 Xrn1P97789 1719 aaKnown RBP23.04■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 Zfyve16Q80U44 1528 aa23.04■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 Kdm2aP59997 1161 aa23.03■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 Lemd3Q9WU40 921 aa23.03■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 Robo2Q7TPD3 1470 aa23.02■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 CenpbP27790 599 aa23.02■■□□□ 1.28
Sec61a1-201ENSMUST00000032168 Calr4Q3TQS0 420 aa23.01■■□□□ 1.27
Sec61a1-201ENSMUST00000032168 Adamts13Q769J6 1426 aa23.01■■□□□ 1.27
Sec61a1-201ENSMUST00000032168 Abca9Q8K449 1623 aa23■■□□□ 1.27
Sec61a1-201ENSMUST00000032168 Cep170Q6A065 1588 aa23■■□□□ 1.27
Sec61a1-201ENSMUST00000032168 Abca17E9PX95 1733 aa22.97■■□□□ 1.27
Sec61a1-201ENSMUST00000032168 Rock2P70336 1388 aa22.96■■□□□ 1.27
Sec61a1-201ENSMUST00000032168 Stk24Q99KH8 431 aa22.95■■□□□ 1.27
Sec61a1-201ENSMUST00000032168 Nsd2Q8BVE8 1365 aa22.95■■□□□ 1.26
Sec61a1-201ENSMUST00000032168 Ppip5k1A2ARP1 1436 aa22.95■■□□□ 1.26
Sec61a1-201ENSMUST00000032168 Pabpn1Q8CCS6 302 aaKnown RBP22.94■■□□□ 1.26
Sec61a1-201ENSMUST00000032168 Tulp4Q9JIL5 1547 aa22.92■■□□□ 1.26
Sec61a1-201ENSMUST00000032168 Os9Q8K2C7 672 aa22.91■■□□□ 1.26
Sec61a1-201ENSMUST00000032168 Nos1Q9Z0J4 1429 aa22.9■■□□□ 1.26
Sec61a1-201ENSMUST00000032168 Pank3Q8R2W9 370 aa22.9■■□□□ 1.26
Sec61a1-201ENSMUST00000032168 Rpgrip1lQ8CG73 1264 aa22.89■■□□□ 1.26
Sec61a1-201ENSMUST00000032168 Myo5cE9Q1F5 1742 aa22.89■■□□□ 1.26
Sec61a1-201ENSMUST00000032168 Kdm5cP41230 1554 aa22.89■■□□□ 1.26
Sec61a1-201ENSMUST00000032168 Inpp5dQ9ES52 1191 aa22.88■■□□□ 1.25
Sec61a1-201ENSMUST00000032168 Ttc21bQ0HA38 1315 aa22.88■■□□□ 1.25
Sec61a1-201ENSMUST00000032168 Abcc6Q9R1S7 1498 aa22.86■■□□□ 1.25
Sec61a1-201ENSMUST00000032168 Ylpm1Q9R0I7 1386 aaKnown RBP22.86■■□□□ 1.25
Sec61a1-201ENSMUST00000032168 Ofd1Q80Z25 1017 aa22.86■■□□□ 1.25
Sec61a1-201ENSMUST00000032168 Q7TT23 1179 aa22.85■■□□□ 1.25
Sec61a1-201ENSMUST00000032168 PrxO55103 1391 aa22.85■■□□□ 1.25
Sec61a1-201ENSMUST00000032168 Abca6Q8K441 1624 aa22.84■■□□□ 1.25
Sec61a1-201ENSMUST00000032168 Srcin1Q9QWI6 1250 aa22.83■■□□□ 1.25
Sec61a1-201ENSMUST00000032168 Ptch1Q61115 1434 aa22.81■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 Znf518aB2RRF6 1478 aaKnown RBP22.81■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 Gm20521D3Z5F7 333 aa22.81■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 Gm156Q58A37 223 aa22.81■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 Setd1aE9PYH6 1716 aa22.8■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 Fndc1E9Q043 1732 aa22.8■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 Tubgcp6G5E8P0 1769 aa22.79■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 Slc4a1apE9PX68 744 aa22.79■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 Fan1Q69ZT1 1020 aa22.78■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 OvosQ3UU35 1456 aa22.78■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 ErbinQ80TH2 1402 aa22.78■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 Col17a1Q07563 1470 aa22.77■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 Hdac5Q9Z2V6 1113 aa22.77■■□□□ 1.24
Sec61a1-201ENSMUST00000032168 AnkarA2RT91 1465 aa22.76■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Zscan10Q3URR7 782 aa22.74■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Ttbk1Q6PCN3 1308 aa22.73■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Uggt2E9Q4X2 1504 aa22.72■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Nolc1E9Q5C9 702 aaKnown RBP22.72■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Anp32bQ9EST5 272 aaKnown RBP22.72■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Prex1Q69ZK0 1650 aa22.72■■□□□ 1.23
Sec61a1-201ENSMUST00000032168 Fam71e1A1L3C1 212 aa22.72■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms