RNA–Protein interactions for RNA: ENSMUST00000031797.10

Ssmem1-201, Transcript of RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

TSL 1 (best) BASIC

Gene Ssmem1, Length 1,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1-201ENSMUST00000031797 Wdr62Q3U3T8 1523 aa10.85□□□□□ -0.67
Ssmem1-201ENSMUST00000031797 Frmpd1A2AKB4 1549 aa10.84□□□□□ -0.67
Ssmem1-201ENSMUST00000031797 Stag3O70576 1240 aa10.84□□□□□ -0.67
Ssmem1-201ENSMUST00000031797 Hs1bp3Q3TC93 395 aa10.84□□□□□ -0.67
Ssmem1-201ENSMUST00000031797 Emid1Q91VF5 444 aa10.84□□□□□ -0.67
Ssmem1-201ENSMUST00000031797 Cecr2E9Q2Z1 1453 aa10.84□□□□□ -0.67
Ssmem1-201ENSMUST00000031797 Retreg3Q9CQV4 466 aa10.84□□□□□ -0.67
Ssmem1-201ENSMUST00000031797 Ppfibp2O35711 882 aa10.83□□□□□ -0.68
Ssmem1-201ENSMUST00000031797 Ttll13A4Q9F6 804 aa10.82□□□□□ -0.68
Ssmem1-201ENSMUST00000031797 Rpusd2Q149F1 553 aa10.82□□□□□ -0.68
Ssmem1-201ENSMUST00000031797 Gpatch8A2A6A1 1505 aa10.81□□□□□ -0.68
Ssmem1-201ENSMUST00000031797 Erbb3Q61526 1339 aa10.81□□□□□ -0.68
Ssmem1-201ENSMUST00000031797 Ms4a4cQ9D3F6 226 aa10.79□□□□□ -0.68
Ssmem1-201ENSMUST00000031797 Phldb1Q6PDH0 1371 aaKnown RBP10.78□□□□□ -0.68
Ssmem1-201ENSMUST00000031797 Gabbr2Q80T41 940 aa10.78□□□□□ -0.68
Ssmem1-201ENSMUST00000031797 MetrnQ8C1Q4 291 aa10.77□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Pcdhgb4Q91XX6 912 aa10.76□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Myt1Q8CFC2 1127 aa10.74□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Fam117aQ7TNF9 451 aa10.73□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Tor1aip2Q8BYU6 502 aa10.73□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Ubl4bQ9CQ84 188 aa10.73□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Prpmp5E9PXN1 296 aa10.72□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Pcdh10E9PXQ7 1057 aa10.72□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Mink1Q9JM52 1308 aa10.71□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Col9a1Q05722 921 aa10.71□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Pxylp1Q8BHA9 480 aa10.71□□□□□ -0.69
Ssmem1-201ENSMUST00000031797 Gm20503G3UZK1 150 aa10.7□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Dab2P98078 766 aa10.7□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Npm1Q61937 292 aaKnown RBP10.7□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Baz1bQ9Z277 1479 aa10.7□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Myt1lP97500 1187 aa10.69□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Dhx30Q99PU8 1217 aaKnown RBP10.69□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Mrc2Q64449 1479 aa10.69□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Map3k7Q62073 579 aa10.67□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Ggt6Q6PDE7 497 aa10.67□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Gpr37Q9QY42 600 aa10.67□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Rhox13F6YCR7 232 aa10.66□□□□□ -0.7
Ssmem1-201ENSMUST00000031797 Rgs9O54828 675 aa10.64□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Gpc1Q9QZF2 557 aa10.64□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Rnf166Q3U9F6 237 aa10.63□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Fchsd2Q3USJ8 740 aa10.63□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Rccd1Q8BTU7 377 aa10.63□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Kcnc4Q8R1C0 628 aa10.63□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Psme1P97371 249 aa10.62□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 GopcQ8BH60 463 aa10.62□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Map2k5Q9WVS7 448 aa10.61□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Lrriq1Q0P5X1 1673 aa10.61□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Nfxl1E9Q8I7 918 aaKnown RBP10.6□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Fam160a1Q505K2 1081 aa10.6□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Clcn1Q64347 994 aa10.6□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Chst12Q99LL3 419 aa10.6□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Hic1Q9R1Y5 733 aa10.6□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Slc27a5Q4LDG0 689 aa10.59□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Mre11Q61216 706 aa10.59□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Fam221bQ8C627 487 aa10.59□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Nob1Q8BW10 403 aa10.58□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Map2k7Q8CE90 535 aa10.58□□□□□ -0.71
Ssmem1-201ENSMUST00000031797 Rtl1Q7M732 1744 aa10.58□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 A930017K11RikE0CXQ2 571 aa10.58□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 Uri1Q3TLD5 531 aa10.58□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 Wdr44Q6NVE8 915 aa10.58□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 OplahQ8K010 1288 aa10.58□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 Itgbl1Q8VDV0 494 aa10.58□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 SmapQ9R0P4 181 aaKnown RBP10.58□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 Cttnbp2B9EJA2 1648 aa10.57□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 PrimpolQ6P1E7 537 aa10.57□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 Q9CQ90 155 aa10.57□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 Kctd12Q6WVG3 327 aa10.56□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 Trim32Q8CH72 655 aa10.55□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 Kri1Q8VDQ9 704 aaKnown RBP10.53□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 Synj1Q8CHC4 1574 aa10.52□□□□□ -0.72
Ssmem1-201ENSMUST00000031797 Irf5P56477 497 aa10.52□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 Itga6Q61739 1091 aa10.52□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 Kif21aQ9QXL2 1672 aa10.51□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 TsksO54887 585 aa10.51□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 Fbxo11Q7TPD1 930 aaKnown RBP10.5□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 CftrP26361 1476 aa10.49□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 Large2Q5XPT3 690 aa10.49□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 Rbm46P86049 533 aa10.48□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 Tie1Q06806 1134 aa10.48□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 Mfsd10Q9D2V8 456 aaKnown RBP10.48□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 Arid5bQ8BM75 1188 aaKnown RBP10.47□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 Gimap6Q8K349 305 aa10.47□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 NntQ61941 1086 aaKnown RBP10.46□□□□□ -0.73
Ssmem1-201ENSMUST00000031797 Phox2bO35690 314 aa10.44□□□□□ -0.74
Ssmem1-201ENSMUST00000031797 ZfrO88532 1074 aaKnown RBP10.44□□□□□ -0.74
Ssmem1-201ENSMUST00000031797 Caskin2Q8VHK1 1201 aa10.41□□□□□ -0.74
Ssmem1-201ENSMUST00000031797 Rsf1E9PWW9 1441 aaKnown RBP10.41□□□□□ -0.74
Ssmem1-201ENSMUST00000031797 TprnA2AI08 749 aaKnown RBP10.4□□□□□ -0.74
Ssmem1-201ENSMUST00000031797 Kcnn2P58390 839 aa10.4□□□□□ -0.74
Ssmem1-201ENSMUST00000031797 Wbp1lQ8BGW2 348 aa10.4□□□□□ -0.74
Ssmem1-201ENSMUST00000031797 Cux2P70298 1426 aa10.39□□□□□ -0.75
Ssmem1-201ENSMUST00000031797 Eif4g3Q80XI3 1579 aaKnown RBP10.39□□□□□ -0.75
Ssmem1-201ENSMUST00000031797 Cyp8b1O88962 500 aa10.38□□□□□ -0.75
Ssmem1-201ENSMUST00000031797 Fam193bQ3U2K0 892 aa10.38□□□□□ -0.75
Ssmem1-201ENSMUST00000031797 Gm11563B1AQ90 168 aa10.37□□□□□ -0.75
Ssmem1-201ENSMUST00000031797 Krtap4-7Q9D732 168 aa10.37□□□□□ -0.75
Ssmem1-201ENSMUST00000031797 Brd4Q9ESU6 1400 aaKnown RBP10.36□□□□□ -0.75
Ssmem1-201ENSMUST00000031797 Ppp4cP97470 307 aa10.34□□□□□ -0.75
Ssmem1-201ENSMUST00000031797 Ano8Q6PB70 1060 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms