RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COT1	YOR316C	SIP2	P34164	415 aa	Known RBP	4.58	□□□□□ -1.68
COT1	YOR316C	PTC1	P35182	281 aa		4.58	□□□□□ -1.68
COT1	YOR316C	CUE2	P36075	443 aa	Known RBP	4.58	□□□□□ -1.68
COT1	YOR316C	GLG1	P36143	616 aa		4.58	□□□□□ -1.68
COT1	YOR316C	MED8	P38304	223 aa		4.58	□□□□□ -1.68
COT1	YOR316C	RFC3	P38629	340 aa		4.58	□□□□□ -1.68
COT1	YOR316C	ATG7	P38862	630 aa		4.58	□□□□□ -1.68
COT1	YOR316C	XBP1	P40489	647 aa		4.58	□□□□□ -1.68
COT1	YOR316C	GAB1	P41733	394 aa		4.58	□□□□□ -1.68
COT1	YOR316C	PSA1	P41940	361 aa	Known RBP	4.58	□□□□□ -1.68
COT1	YOR316C	PRM10	P42946	383 aa		4.58	□□□□□ -1.68
COT1	YOR316C	BIO3	P50277	480 aa		4.58	□□□□□ -1.68
COT1	YOR316C	SPC24	Q04477	213 aa		4.58	□□□□□ -1.68
COT1	YOR316C	GTB1	Q04924	702 aa		4.58	□□□□□ -1.68
COT1	YOR316C	VPS74	Q06385	345 aa		4.58	□□□□□ -1.68
COT1	YOR316C	SWA2	Q06677	668 aa		4.58	□□□□□ -1.68
COT1	YOR316C	YLL007C	Q07799	665 aa		4.58	□□□□□ -1.68
COT1	YOR316C	MMT2	Q08970	484 aa		4.58	□□□□□ -1.68
COT1	YOR316C	YDL211C	Q12121	372 aa		4.58	□□□□□ -1.68
COT1	YOR316C	FRE6	Q12473	712 aa		4.58	□□□□□ -1.68
COT1	YOR316C	YBR126W-A	Q8TGU7	68 aa		4.58	□□□□□ -1.68
COT1	YOR316C	YPR096C	O13587	100 aa		4.57	□□□□□ -1.68
COT1	YOR316C	LEU4	P06208	619 aa	Known RBP	4.57	□□□□□ -1.68
COT1	YOR316C	MSS116	P15424	664 aa	Known RBP	4.57	□□□□□ -1.68
COT1	YOR316C	THR1	P17423	357 aa	Known RBP	4.57	□□□□□ -1.68
COT1	YOR316C	MAK32	P23060	363 aa		4.57	□□□□□ -1.68
COT1	YOR316C	RRP7	P25368	297 aa	Predicted RBP	4.57	□□□□□ -1.68
COT1	YOR316C	ATP7	P30902	174 aa		4.57	□□□□□ -1.68
COT1	YOR316C	DEP1	P31385	405 aa		4.57	□□□□□ -1.68
COT1	YOR316C	MTR2	P34232	184 aa	Known RBP	4.57	□□□□□ -1.68
COT1	YOR316C	DOA1	P36037	715 aa		4.57	□□□□□ -1.68
COT1	YOR316C	FZO1	P38297	855 aa		4.57	□□□□□ -1.68
COT1	YOR316C	GDT1	P38301	280 aa	Predicted RBP	4.57	□□□□□ -1.68
COT1	YOR316C	TSC10	P38342	320 aa		4.57	□□□□□ -1.68
COT1	YOR316C	RPL10	P41805	221 aa	Known RBP	4.57	□□□□□ -1.68
COT1	YOR316C	RAD17	P48581	401 aa		4.57	□□□□□ -1.68
COT1	YOR316C	MIG2	P53035	382 aa		4.57	□□□□□ -1.68
COT1	YOR316C	ROG1	P53118	685 aa		4.57	□□□□□ -1.68
COT1	YOR316C	MKC7	P53379	596 aa		4.57	□□□□□ -1.68
COT1	YOR316C	EOS1	P53938	366 aa		4.57	□□□□□ -1.68
COT1	YOR316C	ATG21	Q02887	496 aa		4.57	□□□□□ -1.68
COT1	YOR316C	NRG1	Q03125	231 aa		4.57	□□□□□ -1.68
COT1	YOR316C	DLT1	Q04216	342 aa		4.57	□□□□□ -1.68
COT1	YOR316C	APC4	Q04601	652 aa		4.57	□□□□□ -1.68
COT1	YOR316C	ERB1	Q04660	807 aa	Known RBP	4.57	□□□□□ -1.68
COT1	YOR316C	ATG38	Q05789	226 aa	Known RBP	4.57	□□□□□ -1.68
COT1	YOR316C	YPR064W	Q12492	139 aa		4.57	□□□□□ -1.68
COT1	YOR316C	CDC36	P06100	191 aa	Predicted RBP	4.56	□□□□□ -1.68
COT1	YOR316C	TPK2	P06245	380 aa		4.56	□□□□□ -1.68
COT1	YOR316C	PWP1	P21304	576 aa	Known RBP	4.56	□□□□□ -1.68
COT1	YOR316C	APN1	P22936	367 aa		4.56	□□□□□ -1.68
COT1	YOR316C	CAT2	P32796	670 aa	Known RBP	4.56	□□□□□ -1.68
COT1	YOR316C	SSO1	P32867	290 aa		4.56	□□□□□ -1.68
COT1	YOR316C	MNN2	P38069	597 aa		4.56	□□□□□ -1.68
COT1	YOR316C	DTR1	P38125	572 aa		4.56	□□□□□ -1.68
COT1	YOR316C	BNA4	P38169	460 aa		4.56	□□□□□ -1.68
COT1	YOR316C	ECM1	P39715	212 aa		4.56	□□□□□ -1.68
COT1	YOR316C	ECO1	P43605	281 aa		4.56	□□□□□ -1.68
COT1	YOR316C	DIA3	P52290	468 aa		4.56	□□□□□ -1.68
COT1	YOR316C	YNR071C	P53757	342 aa		4.56	□□□□□ -1.68
COT1	YOR316C	PDR16	P53860	351 aa	Known RBP	4.56	□□□□□ -1.68
COT1	YOR316C	OAZ1	Q02803	292 aa		4.56	□□□□□ -1.68
COT1	YOR316C	YPL107W	Q02873	248 aa		4.56	□□□□□ -1.68
COT1	YOR316C	RAD33	Q04231	177 aa		4.56	□□□□□ -1.68
COT1	YOR316C	DPB4	Q04603	196 aa	Known RBP	4.56	□□□□□ -1.68
COT1	YOR316C	TRI1	Q05024	226 aa		4.56	□□□□□ -1.68
COT1	YOR316C	YHC1	Q05900	231 aa	Known RBP	4.56	□□□□□ -1.68
COT1	YOR316C	GMC2	Q06201	188 aa		4.56	□□□□□ -1.68
COT1	YOR316C	SLF1	Q12034	447 aa	Known RBP	4.56	□□□□□ -1.68
COT1	YOR316C	NCE102	Q12207	173 aa	RIP-Chip data	4.56	□□□□□ -1.68	not detected
COT1	YOR316C	JLP1	Q12358	412 aa		4.56	□□□□□ -1.68
COT1	YOR316C	RPN6	Q12377	434 aa		4.56	□□□□□ -1.68
COT1	YOR316C	YLR302C	O13544	120 aa		4.55	□□□□□ -1.68
COT1	YOR316C	ATP6	P00854	259 aa		4.55	□□□□□ -1.68
COT1	YOR316C	ALG7	P07286	448 aa		4.55	□□□□□ -1.68
COT1	YOR316C	SUI3	P09064	285 aa	Known RBP	4.55	□□□□□ -1.68
COT1	YOR316C	RAP1	P11938	827 aa		4.55	□□□□□ -1.68
COT1	YOR316C	SPS100	P13130	326 aa		4.55	□□□□□ -1.68
COT1	YOR316C	CCA1	P21269	546 aa		4.55	□□□□□ -1.68
COT1	YOR316C	SPB1	P25582	841 aa	Predicted RBP	4.55	□□□□□ -1.68
COT1	YOR316C	POL4	P25615	582 aa		4.55	□□□□□ -1.68
COT1	YOR316C	SSE1	P32589	693 aa	Known RBP	4.55	□□□□□ -1.68
COT1	YOR316C	SWH1	P35845	1188 aa		4.55	□□□□□ -1.68
COT1	YOR316C	MRPL17	P36528	281 aa		4.55	□□□□□ -1.68
COT1	YOR316C	SCO2	P38072	301 aa		4.55	□□□□□ -1.68
COT1	YOR316C	RGI1	P40043	161 aa	Predicted RBP	4.55	□□□□□ -1.68
COT1	YOR316C	VRG4	P40107	337 aa		4.55	□□□□□ -1.68
COT1	YOR316C	PTR3	P43606	678 aa		4.55	□□□□□ -1.68
COT1	YOR316C	COG2	P53271	262 aa		4.55	□□□□□ -1.68
COT1	YOR316C	RNH1	Q04740	348 aa		4.55	□□□□□ -1.68
COT1	YOR316C	DYN3	Q04949	312 aa		4.55	□□□□□ -1.68
COT1	YOR316C	RQC1	Q05468	723 aa	Known RBP	4.55	□□□□□ -1.68
COT1	YOR316C	GGA1	Q06336	557 aa		4.55	□□□□□ -1.68
COT1	YOR316C	YPR172W	Q06608	200 aa		4.55	□□□□□ -1.68
COT1	YOR316C	YPR202W	Q08993	238 aa		4.55	□□□□□ -1.68
COT1	YOR316C	MDN1	Q12019	4910 aa	Known RBP	4.55	□□□□□ -1.68
COT1	YOR316C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
COT1	YOR316C	VPS33	P20795	691 aa		4.54	□□□□□ -1.68
COT1	YOR316C	IDH2	P28241	369 aa	Known RBP	4.54	□□□□□ -1.68
COT1	YOR316C	ZIP1	P31111	875 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms