RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C HPR1P17629 752 aaKnown RBP2.98□□□□□ -1.93
LCB4YOR171C RPO26P20435 155 aa2.98□□□□□ -1.93
LCB4YOR171C RFA3P26755 122 aaKnown RBP2.98□□□□□ -1.93
LCB4YOR171C PDR3P33200 976 aa2.98□□□□□ -1.93
LCB4YOR171C YBR144CP34215 104 aa2.98□□□□□ -1.93
LCB4YOR171C SPT10P35208 640 aa2.98□□□□□ -1.93
LCB4YOR171C ARA1P38115 344 aa2.98□□□□□ -1.93
LCB4YOR171C ICS2P38284 255 aa2.98□□□□□ -1.93
LCB4YOR171C MED8P38304 223 aa2.98□□□□□ -1.93
LCB4YOR171C TRM5P38793 499 aa2.98□□□□□ -1.93
LCB4YOR171C ECM10P39987 644 aa2.98□□□□□ -1.93
LCB4YOR171C CDC1P40986 491 aa2.98□□□□□ -1.93
LCB4YOR171C ATP23P53722 227 aa2.98□□□□□ -1.93
LCB4YOR171C YMR114CQ04471 368 aaKnown RBP2.98□□□□□ -1.93
LCB4YOR171C ADH6Q04894 360 aaKnown RBP2.98□□□□□ -1.93
LCB4YOR171C PEX10Q05568 337 aa2.98□□□□□ -1.93
LCB4YOR171C YPR127WQ06494 345 aa2.98□□□□□ -1.93
LCB4YOR171C PEX27Q08580 376 aa2.98□□□□□ -1.93
LCB4YOR171C AKR2Q12013 749 aa2.98□□□□□ -1.93
LCB4YOR171C HMS1Q12398 434 aa2.98□□□□□ -1.93
LCB4YOR171C SNT2P53127 1403 aa2.98□□□□□ -1.93
LCB4YOR171C YLL053CP0CD98 152 aa2.97□□□□□ -1.93
LCB4YOR171C NMT1P14743 455 aa2.97□□□□□ -1.93
LCB4YOR171C ATP10P18496 279 aa2.97□□□□□ -1.93
LCB4YOR171C AIM17P23180 465 aaKnown RBP2.97□□□□□ -1.93
LCB4YOR171C CDC10P25342 322 aaKnown RBP2.97□□□□□ -1.93
LCB4YOR171C PUT3P25502 979 aaPredicted RBP2.97□□□□□ -1.93
LCB4YOR171C UPS2P35200 230 aa2.97□□□□□ -1.93
LCB4YOR171C NTR2P36118 322 aaPredicted RBP2.97□□□□□ -1.93
LCB4YOR171C PRS2P38620 318 aaKnown RBP2.97□□□□□ -1.93
LCB4YOR171C HIS2P38635 335 aa2.97□□□□□ -1.93
LCB4YOR171C UBA4P38820 440 aa2.97□□□□□ -1.93
LCB4YOR171C YHR177WP38867 453 aa2.97□□□□□ -1.93
LCB4YOR171C GPI16P38875 610 aa2.97□□□□□ -1.93
LCB4YOR171C DSE1P40077 573 aa2.97□□□□□ -1.93
LCB4YOR171C BUR6P40096 142 aa2.97□□□□□ -1.93
LCB4YOR171C YFR057WP43625 151 aa2.97□□□□□ -1.93
LCB4YOR171C ZRG17P53735 605 aa2.97□□□□□ -1.93
LCB4YOR171C YPL080CQ02826 108 aa2.97□□□□□ -1.93
LCB4YOR171C YMD8Q03697 442 aa2.97□□□□□ -1.93
LCB4YOR171C SNU56Q03782 492 aaKnown RBP2.97□□□□□ -1.93
LCB4YOR171C YMR160WQ03823 816 aa2.97□□□□□ -1.93
LCB4YOR171C BUR2Q05949 395 aa2.97□□□□□ -1.93
LCB4YOR171C RIF2Q06208 395 aa2.97□□□□□ -1.93
LCB4YOR171C POS5Q06892 414 aa2.97□□□□□ -1.93
LCB4YOR171C YPL225WQ08971 146 aaKnown RBP2.97□□□□□ -1.93
LCB4YOR171C RUP1Q12242 671 aa2.97□□□□□ -1.93
LCB4YOR171C RPO41P13433 1351 aaKnown RBP2.97□□□□□ -1.93
LCB4YOR171C COX3P00420 269 aa2.96□□□□□ -1.93
LCB4YOR171C SCEIP03882 235 aa2.96□□□□□ -1.93
LCB4YOR171C KIN28P06242 306 aa2.96□□□□□ -1.93
LCB4YOR171C RPS28BP0C0X0 67 aaKnown RBP2.96□□□□□ -1.93
LCB4YOR171C RPL31BP0C2H9 113 aaKnown RBP2.96□□□□□ -1.93
LCB4YOR171C NFT1P0CE68 1218 aa2.96□□□□□ -1.93
LCB4YOR171C ASP3-2P0CX77 362 aa2.96□□□□□ -1.93
LCB4YOR171C ASP3-3P0CX78 362 aa2.96□□□□□ -1.93
LCB4YOR171C ASP3-4P0CX79 362 aa2.96□□□□□ -1.93
LCB4YOR171C ASP3-1P0CZ17 362 aa2.96□□□□□ -1.93
LCB4YOR171C PET54P10834 293 aa2.96□□□□□ -1.93
LCB4YOR171C NHP6AP11632 93 aaKnown RBP2.96□□□□□ -1.93
LCB4YOR171C ART10P18634 518 aaKnown RBP2.96□□□□□ -1.93
LCB4YOR171C NUP1P20676 1076 aa2.96□□□□□ -1.93
LCB4YOR171C CPR4P25334 318 aa2.96□□□□□ -1.93
LCB4YOR171C YCR101CP25607 182 aa2.96□□□□□ -1.93
LCB4YOR171C ITR2P30606 609 aa2.96□□□□□ -1.93
LCB4YOR171C YSC83P32792 385 aa2.96□□□□□ -1.93
LCB4YOR171C VPS21P36017 210 aaKnown RBP2.96□□□□□ -1.93
LCB4YOR171C YBR242WP38331 238 aa2.96□□□□□ -1.93
LCB4YOR171C SPC97P38863 823 aa2.96□□□□□ -1.93
LCB4YOR171C BDH1P39714 382 aa2.96□□□□□ -1.93
LCB4YOR171C HAT2P39984 401 aa2.96□□□□□ -1.93
LCB4YOR171C ALG8P40351 577 aa2.96□□□□□ -1.93
LCB4YOR171C YIR016WP40572 265 aa2.96□□□□□ -1.93
LCB4YOR171C YGR201CP42936 225 aa2.96□□□□□ -1.93
LCB4YOR171C RPN11P43588 306 aaKnown RBP2.96□□□□□ -1.93
LCB4YOR171C SFH5P47008 294 aa2.96□□□□□ -1.93
LCB4YOR171C BNA3P47039 444 aaKnown RBP2.96□□□□□ -1.93
LCB4YOR171C YJR054WP47114 497 aa2.96□□□□□ -1.93
LCB4YOR171C YLR460CP54007 376 aa2.96□□□□□ -1.93
LCB4YOR171C LGE1Q02796 332 aaKnown RBP2.96□□□□□ -1.93
LCB4YOR171C DIG1Q03063 452 aaKnown RBP2.96□□□□□ -1.93
LCB4YOR171C SNO1Q03144 224 aa2.96□□□□□ -1.93
LCB4YOR171C CSM3Q04659 317 aa2.96□□□□□ -1.93
LCB4YOR171C HCR1Q05775 265 aaKnown RBP2.96□□□□□ -1.93
LCB4YOR171C COQ11Q05892 277 aa2.96□□□□□ -1.93
LCB4YOR171C TPO3Q06451 622 aa2.96□□□□□ -1.93
LCB4YOR171C MFG1Q07684 458 aa2.96□□□□□ -1.93
LCB4YOR171C YLR036CQ07986 203 aa2.96□□□□□ -1.93
LCB4YOR171C YPR1Q12458 312 aa2.96□□□□□ -1.93
LCB4YOR171C YNL162W-AQ3E7A8 72 aa2.96□□□□□ -1.93
LCB4YOR171C RPS28AQ3E7X9 67 aaPredicted RBP2.96□□□□□ -1.93
LCB4YOR171C Q0144Q9ZZW2 109 aa2.96□□□□□ -1.93
LCB4YOR171C SPS4P09937 338 aa2.96□□□□□ -1.94
LCB4YOR171C BUD23P25627 275 aaPredicted RBP2.96□□□□□ -1.94
LCB4YOR171C PPZ1P26570 692 aa2.96□□□□□ -1.94
LCB4YOR171C TMT1P32643 299 aa2.96□□□□□ -1.94
LCB4YOR171C REC114P32841 428 aa2.96□□□□□ -1.94
LCB4YOR171C MRPL17P36528 281 aa2.96□□□□□ -1.94
LCB4YOR171C AAP1P37898 856 aaKnown RBP2.96□□□□□ -1.94
LCB4YOR171C IKI1P38874 309 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms