RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeastyeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB3YNL293W NUP116Q02630 1113 aa6.74□□□□□ -1.33
MSB3YNL293W SNO1Q03144 224 aa6.74□□□□□ -1.33
MSB3YNL293W YDR391CQ04170 232 aa6.74□□□□□ -1.33
MSB3YNL293W BER1Q06688 274 aaKnown RBP6.74□□□□□ -1.33
MSB3YNL293W MRX9Q07349 420 aaKnown RBP6.74□□□□□ -1.33
MSB3YNL293W YPL245WQ12179 454 aaKnown RBP6.74□□□□□ -1.33
MSB3YNL293W YDR262WQ12331 272 aa6.74□□□□□ -1.33
MSB3YNL293W MHT1Q12525 324 aa6.74□□□□□ -1.33
MSB3YNL293W YPL119C-AQ3E751 87 aa6.74□□□□□ -1.33
MSB3YNL293W HBN1Q96VH4 193 aa6.74□□□□□ -1.33
MSB3YNL293W CYC1P00044 109 aaPredicted RBP6.74□□□□□ -1.33
MSB3YNL293W AI1P03875 834 aa6.74□□□□□ -1.33
MSB3YNL293W CPR1P14832 162 aaKnown RBP6.74□□□□□ -1.33
MSB3YNL293W RPB3P16370 318 aaKnown RBP6.74□□□□□ -1.33
MSB3YNL293W MAG1P22134 296 aaKnown RBP6.74□□□□□ -1.33
MSB3YNL293W KIN82P25341 720 aa6.74□□□□□ -1.33
MSB3YNL293W RHB1P25378 209 aa6.74□□□□□ -1.33
MSB3YNL293W EHD3P28817 500 aa6.74□□□□□ -1.33
MSB3YNL293W IRS4P36115 615 aaKnown RBP6.74□□□□□ -1.33
MSB3YNL293W TFA2P36145 328 aa6.74□□□□□ -1.33
MSB3YNL293W CRP1P38845 465 aaKnown RBP6.74□□□□□ -1.33
MSB3YNL293W PHO90P39535 881 aa6.74□□□□□ -1.33
MSB3YNL293W PEP8P40335 379 aa6.74□□□□□ -1.33
MSB3YNL293W GDS1P41913 522 aa6.74□□□□□ -1.33
MSB3YNL293W FLC3P53121 802 aa6.74□□□□□ -1.33
MSB3YNL293W YGL101WP53144 215 aa6.74□□□□□ -1.33
MSB3YNL293W COQ6P53318 479 aa6.74□□□□□ -1.33
MSB3YNL293W DIA1P54005 336 aa6.74□□□□□ -1.33
MSB3YNL293W ARG5,6Q01217 863 aa6.74□□□□□ -1.33
MSB3YNL293W YPL067CQ02754 198 aa6.74□□□□□ -1.33
MSB3YNL293W EKI1Q03764 534 aa6.74□□□□□ -1.33
MSB3YNL293W PPN1Q04119 674 aa6.74□□□□□ -1.33
MSB3YNL293W CRT10Q08226 957 aa6.74□□□□□ -1.33
MSB3YNL293W PRM4Q12498 284 aa6.74□□□□□ -1.33
MSB3YNL293W ACO1P19414 778 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
MSB3YNL293W VBA5P36172 582 aa6.73□□□□□ -1.33
MSB3YNL293W MRPL28P36527 147 aa6.73□□□□□ -1.33
MSB3YNL293W TAT1P38085 619 aa6.73□□□□□ -1.33
MSB3YNL293W YBR053CP38235 358 aa6.73□□□□□ -1.33
MSB3YNL293W ARN1P38731 627 aa6.73□□□□□ -1.33
MSB3YNL293W FAA3P39002 694 aa6.73□□□□□ -1.33
MSB3YNL293W HAT2P39984 401 aa6.73□□□□□ -1.33
MSB3YNL293W GUP1P53154 560 aa6.73□□□□□ -1.33
MSB3YNL293W NQM1P53228 333 aaPredicted RBP6.73□□□□□ -1.33
MSB3YNL293W AAT1Q01802 451 aa6.73□□□□□ -1.33
MSB3YNL293W CTK1Q03957 528 aaKnown RBP6.73□□□□□ -1.33
MSB3YNL293W POM33Q12164 279 aa6.73□□□□□ -1.33
MSB3YNL293W YDL199CQ12407 687 aa6.73□□□□□ -1.33
MSB3YNL293W RTN2Q12443 393 aa6.73□□□□□ -1.33
MSB3YNL293W ASP3-2P0CX77 362 aa6.72□□□□□ -1.33
MSB3YNL293W ASP3-3P0CX78 362 aa6.72□□□□□ -1.33
MSB3YNL293W ASP3-4P0CX79 362 aa6.72□□□□□ -1.33
MSB3YNL293W ASP3-1P0CZ17 362 aa6.72□□□□□ -1.33
MSB3YNL293W EXG1P23776 448 aaKnown RBP6.72□□□□□ -1.33
MSB3YNL293W VBA3P25594 458 aa6.72□□□□□ -1.33
MSB3YNL293W DTR1P38125 572 aa6.72□□□□□ -1.33
MSB3YNL293W RPF1P38805 295 aaKnown RBP6.72□□□□□ -1.33
MSB3YNL293W FAD1P38913 306 aa6.72□□□□□ -1.33
MSB3YNL293W SWM2P40342 146 aa6.72□□□□□ -1.33
MSB3YNL293W POG1P40473 351 aa6.72□□□□□ -1.33
MSB3YNL293W TRM9P49957 279 aa6.72□□□□□ -1.33
MSB3YNL293W AZR1P50080 613 aa6.72□□□□□ -1.33
MSB3YNL293W ATF2P53296 535 aa6.72□□□□□ -1.33
MSB3YNL293W CUS2P53830 285 aaPredicted RBP6.72□□□□□ -1.33
MSB3YNL293W GPD1Q00055 391 aaKnown RBP6.72□□□□□ -1.33
MSB3YNL293W TRM44Q02648 567 aaKnown RBP6.72□□□□□ -1.33
MSB3YNL293W ATC1Q04005 294 aa6.72□□□□□ -1.33
MSB3YNL293W GMC1Q04399 608 aa6.72□□□□□ -1.33
MSB3YNL293W CSM3Q04659 317 aa6.72□□□□□ -1.33
MSB3YNL293W PST2Q12335 198 aaKnown RBP6.72□□□□□ -1.33
MSB3YNL293W FRT1Q99332 602 aa6.72□□□□□ -1.33
MSB3YNL293W COX5BP00425 151 aa6.72□□□□□ -1.33
MSB3YNL293W SCH9P11792 824 aaKnown RBP6.72□□□□□ -1.33
MSB3YNL293W NUP1P20676 1076 aa6.72□□□□□ -1.33
MSB3YNL293W ERG6P25087 383 aaKnown RBP6.72□□□□□ -1.33
MSB3YNL293W PET18P25362 215 aa6.72□□□□□ -1.33
MSB3YNL293W CAT2P32796 670 aaKnown RBP6.72□□□□□ -1.33
MSB3YNL293W STS1P38637 319 aa6.72□□□□□ -1.33
MSB3YNL293W FET3P38993 636 aa6.72□□□□□ -1.33
MSB3YNL293W COG3P40094 801 aa6.72□□□□□ -1.33
MSB3YNL293W KHA1P40309 873 aa6.72□□□□□ -1.33
MSB3YNL293W FMC1P40491 155 aa6.72□□□□□ -1.33
MSB3YNL293W PRM10P42946 383 aa6.72□□□□□ -1.33
MSB3YNL293W HXT10P43581 546 aa6.72□□□□□ -1.33
MSB3YNL293W SCW11P53189 542 aa6.72□□□□□ -1.33
MSB3YNL293W PEX31P53203 462 aa6.72□□□□□ -1.33
MSB3YNL293W VPS9P54787 451 aa6.72□□□□□ -1.33
MSB3YNL293W YOL159C-AQ3E769 90 aa6.72□□□□□ -1.33
MSB3YNL293W COA6Q3E846 104 aa6.72□□□□□ -1.33
MSB3YNL293W SUS1Q6WNK7 96 aa6.72□□□□□ -1.33
MSB3YNL293W HAP3P13434 144 aa6.71□□□□□ -1.34
MSB3YNL293W ADE1P27616 306 aa6.71□□□□□ -1.34
MSB3YNL293W AEP1P32493 518 aa6.71□□□□□ -1.34
MSB3YNL293W FRE2P36033 711 aa6.71□□□□□ -1.34
MSB3YNL293W TCD2P36101 447 aaKnown RBP6.71□□□□□ -1.34
MSB3YNL293W APL3P38065 1025 aa6.71□□□□□ -1.34
MSB3YNL293W RIB5P38145 238 aa6.71□□□□□ -1.34
MSB3YNL293W FAT1P38225 669 aa6.71□□□□□ -1.34
MSB3YNL293W YPC1P38298 316 aa6.71□□□□□ -1.34
MSB3YNL293W PHO89P38361 574 aa6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms