RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W ARC19P33204 171 aaKnown RBP6.84□□□□□ -1.32
NUP53YMR153W HIS7P33734 552 aaKnown RBP6.84□□□□□ -1.32
NUP53YMR153W SWH1P35845 1188 aa6.84□□□□□ -1.32
NUP53YMR153W RIB1P38066 345 aa6.84□□□□□ -1.32
NUP53YMR153W ZRG8P40021 1076 aa6.84□□□□□ -1.32
NUP53YMR153W COG3P40094 801 aa6.84□□□□□ -1.32
NUP53YMR153W MPM1P40364 252 aa6.84□□□□□ -1.32
NUP53YMR153W YGR126WP53274 230 aa6.84□□□□□ -1.32
NUP53YMR153W MEP3P53390 489 aa6.84□□□□□ -1.32
NUP53YMR153W DSL1P53847 754 aa6.84□□□□□ -1.32
NUP53YMR153W RNH202Q05635 350 aa6.84□□□□□ -1.32
NUP53YMR153W DBP9Q06218 594 aaKnown RBP6.84□□□□□ -1.32
NUP53YMR153W IRC19Q07843 230 aa6.84□□□□□ -1.32
NUP53YMR153W SKI7Q08491 747 aaPredicted RBP6.84□□□□□ -1.32
NUP53YMR153W YPL191CQ08930 360 aa6.84□□□□□ -1.32
NUP53YMR153W BTS1Q12051 335 aa6.84□□□□□ -1.32
NUP53YMR153W UTP20P35194 2493 aaKnown RBP6.83□□□□□ -1.32
NUP53YMR153W HEM4P06174 275 aa6.83□□□□□ -1.32
NUP53YMR153W YOL163WP0CF20 169 aa6.83□□□□□ -1.32
NUP53YMR153W SLC1P33333 303 aa6.83□□□□□ -1.32
NUP53YMR153W SKG1P36169 355 aa6.83□□□□□ -1.32
NUP53YMR153W RRP4P38792 359 aaKnown RBP6.83□□□□□ -1.32
NUP53YMR153W SOK2P53438 785 aaPredicted RBP6.83□□□□□ -1.32
NUP53YMR153W YNL095CP53932 642 aa6.83□□□□□ -1.32
NUP53YMR153W YKR011CQ02209 353 aa6.83□□□□□ -1.32
NUP53YMR153W NAN1Q02931 896 aaKnown RBP6.83□□□□□ -1.32
NUP53YMR153W SWA2Q06677 668 aa6.83□□□□□ -1.32
NUP53YMR153W SYO1Q07395 620 aa6.83□□□□□ -1.32
NUP53YMR153W RSA1Q08932 381 aa6.83□□□□□ -1.32
NUP53YMR153W TFC1P32367 649 aa6.82□□□□□ -1.32
NUP53YMR153W TIM12P32830 109 aa6.82□□□□□ -1.32
NUP53YMR153W MRPL39P36533 70 aa6.82□□□□□ -1.32
NUP53YMR153W SEN34P39707 275 aa6.82□□□□□ -1.32
NUP53YMR153W RFC4P40339 323 aaKnown RBP6.82□□□□□ -1.32
NUP53YMR153W NOP9P47077 666 aaKnown RBP6.82□□□□□ -1.32
NUP53YMR153W SNF12P53628 566 aa6.82□□□□□ -1.32
NUP53YMR153W CRT10Q08226 957 aa6.82□□□□□ -1.32
NUP53YMR153W YDL180WQ12301 547 aa6.82□□□□□ -1.32
NUP53YMR153W DET1Q99288 334 aaKnown RBP6.82□□□□□ -1.32
NUP53YMR153W YPK2P18961 677 aa6.81□□□□□ -1.32
NUP53YMR153W GAS1P22146 559 aaKnown RBP6.81□□□□□ -1.32
NUP53YMR153W DBP2P24783 546 aaKnown RBP6.81□□□□□ -1.32
NUP53YMR153W RHB1P25378 209 aa6.81□□□□□ -1.32
NUP53YMR153W SNC1P31109 117 aa6.81□□□□□ -1.32
NUP53YMR153W CYS4P32582 507 aaKnown RBP6.81□□□□□ -1.32
NUP53YMR153W MAE1P36013 669 aaKnown RBP6.81□□□□□ -1.32
NUP53YMR153W COS9P36034 407 aa6.81□□□□□ -1.32
NUP53YMR153W JEN1P36035 616 aa6.81□□□□□ -1.32
NUP53YMR153W SKN7P38889 622 aa6.81□□□□□ -1.32
NUP53YMR153W RCY1P39531 840 aa6.81□□□□□ -1.32
NUP53YMR153W RBG1P39729 369 aa6.81□□□□□ -1.32
NUP53YMR153W YIL166CP40445 542 aa6.81□□□□□ -1.32
NUP53YMR153W RBG2P53295 368 aaKnown RBP6.81□□□□□ -1.32
NUP53YMR153W KAP120Q02932 1032 aa6.81□□□□□ -1.32
NUP53YMR153W YMR102CQ03177 834 aa6.81□□□□□ -1.32
NUP53YMR153W COQ11Q05892 277 aa6.81□□□□□ -1.32
NUP53YMR153W RAF1Q06891 181 aa6.81□□□□□ -1.32
NUP53YMR153W NTG2Q08214 380 aa6.81□□□□□ -1.32
NUP53YMR153W RLM1Q12224 676 aa6.81□□□□□ -1.32
NUP53YMR153W IDH1P28834 360 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
NUP53YMR153W DPH5P32469 300 aaPredicted RBP6.8□□□□□ -1.32
NUP53YMR153W MTR2P34232 184 aaKnown RBP6.8□□□□□ -1.32
NUP53YMR153W CHK1P38147 527 aa6.8□□□□□ -1.32
NUP53YMR153W FET3P38993 636 aa6.8□□□□□ -1.32
NUP53YMR153W KRE29P40026 464 aa6.8□□□□□ -1.32
NUP53YMR153W YMR144WP40214 342 aaKnown RBP6.8□□□□□ -1.32
NUP53YMR153W GPP1P41277 250 aaKnown RBP6.8□□□□□ -1.32
NUP53YMR153W CAK1P43568 368 aaPredicted RBP6.8□□□□□ -1.32
NUP53YMR153W ADO1P47143 340 aaKnown RBP6.8□□□□□ -1.32
NUP53YMR153W IMD4P50094 524 aaKnown RBP6.8□□□□□ -1.32
NUP53YMR153W YNR062CP53748 327 aa6.8□□□□□ -1.32
NUP53YMR153W SPR6Q01684 191 aa6.8□□□□□ -1.32
NUP53YMR153W RRN5Q02983 363 aa6.8□□□□□ -1.32
NUP53YMR153W VBA4Q04602 768 aaKnown RBP6.8□□□□□ -1.32
NUP53YMR153W UTP21Q06078 939 aaPredicted RBP6.8□□□□□ -1.32
NUP53YMR153W COQ10Q08058 207 aa6.8□□□□□ -1.32
NUP53YMR153W MED2Q12124 431 aa6.8□□□□□ -1.32
NUP53YMR153W RHO1P06780 209 aaKnown RBP6.79□□□□□ -1.32
NUP53YMR153W PEP4P07267 405 aaKnown RBP6.79□□□□□ -1.32
NUP53YMR153W TFS1P14306 219 aa6.79□□□□□ -1.32
NUP53YMR153W NUP1P20676 1076 aa6.79□□□□□ -1.32
NUP53YMR153W RPI1P23250 407 aaKnown RBP6.79□□□□□ -1.32
NUP53YMR153W PRP28P23394 588 aa6.79□□□□□ -1.32
NUP53YMR153W YCR100CP25606 316 aa6.79□□□□□ -1.32
NUP53YMR153W ASF2P32448 525 aaPredicted RBP6.79□□□□□ -1.32
NUP53YMR153W ECM15P35195 104 aa6.79□□□□□ -1.32
NUP53YMR153W GPX1P36014 167 aa6.79□□□□□ -1.32
NUP53YMR153W PDX3P38075 228 aaKnown RBP6.79□□□□□ -1.32
NUP53YMR153W YGP1P38616 354 aaKnown RBP6.79□□□□□ -1.32
NUP53YMR153W SWD1P39706 426 aa6.79□□□□□ -1.32
NUP53YMR153W IDP2P41939 412 aa6.79□□□□□ -1.32
NUP53YMR153W IRC7P43623 340 aa6.79□□□□□ -1.32
NUP53YMR153W BAT2P47176 376 aaKnown RBP6.79□□□□□ -1.32
NUP53YMR153W YGR168CP53293 376 aa6.79□□□□□ -1.32
NUP53YMR153W ELA1P53861 379 aaPredicted RBP6.79□□□□□ -1.32
NUP53YMR153W INN1P53901 409 aa6.79□□□□□ -1.32
NUP53YMR153W MHF1Q3E835 90 aa6.79□□□□□ -1.32
NUP53YMR153W SIR3P06701 978 aa6.78□□□□□ -1.32
NUP53YMR153W CAR2P07991 424 aaKnown RBP6.78□□□□□ -1.32
NUP53YMR153W RPB8P20436 146 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms