RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	THI2	P38141	450 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	EGD2	P38879	174 aa	Known RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	MNN9	P39107	395 aa	Known RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	JLP2	P40206	208 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	UTP18	P40362	594 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	AGP3	P43548	558 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	GLG2	P47011	380 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	KEL2	P50090	882 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	ARO8	P53090	500 aa	Known RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	GET1	P53192	235 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	CRZ1	P53968	678 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	PNG1	Q02890	363 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	RTC5	Q12108	567 aa	Known RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	FLO11	P08640	1367 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	RIM15	P43565	1770 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	TPK3	P05986	398 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	SPS4	P09937	338 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	YGL041W-A	P0C5N3	154 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	DSF1	P0CX08	502 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	YNR073C	P0CX09	502 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	ASF2	P32448	525 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	TUL1	P36096	758 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	FMP46	P36141	133 aa	Known RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	ARA1	P38115	344 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	MTC4	P38335	694 aa	Known RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	YHR045W	P38775	560 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	HAT2	P39984	401 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	PEP8	P40335	379 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	HOC1	P47124	396 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	NAS6	P50086	228 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	YML6	P51998	286 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	FMP48	P53233	369 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	YGR111W	P53265	400 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	CAF40	P53829	373 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	RRP17	Q04031	235 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	RPN9	Q04062	393 aa	Known RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	RRN11	Q04712	507 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	YLL007C	Q07799	665 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	CLP1	Q08685	445 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	SAM4	Q08985	325 aa	Known RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	AYT1	Q12226	474 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	DCP1	Q12517	231 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	BNI1	P41832	1953 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	RPS3	P05750	240 aa	Known RBP	3.09	□□□□□ -1.91
VPS33	YLR396C	CDC33	P07260	213 aa	Known RBP	3.09	□□□□□ -1.91
VPS33	YLR396C	FBA1	P14540	359 aa	Known RBP	3.09	□□□□□ -1.91
VPS33	YLR396C	IDH2	P28241	369 aa	Known RBP	3.09	□□□□□ -1.91
VPS33	YLR396C	RML2	P32611	393 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	ATG7	P38862	630 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	MTW1	P39731	289 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	SNZ3	P43545	298 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	YFL040W	P43562	540 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	GWT1	P47026	490 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	COS5	P47187	383 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	COS10	P52924	374 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	YGL260W	P53056	76 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	MNP1	P53163	194 aa	Predicted RBP	3.09	□□□□□ -1.91
VPS33	YLR396C	SNZ2	P53824	298 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	YDR131C	Q03899	556 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	YDR222W	Q04925	415 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	DBP9	Q06218	594 aa	Known RBP	3.09	□□□□□ -1.91
VPS33	YLR396C	DTD1	Q07648	150 aa	Known RBP	3.09	□□□□□ -1.91
VPS33	YLR396C	COS7	Q07788	383 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	APC9	Q12107	265 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	SET6	Q12529	373 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	YMR230W-A	Q3E7B5	62 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	YIL002W-A	Q3E7Z5	69 aa		3.09	□□□□□ -1.91
VPS33	YLR396C	CYB2	P00175	591 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	LEU4	P06208	619 aa	Known RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	URA7	P28274	579 aa	Known RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	MEI5	P32489	222 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	UIP5	P36137	443 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	PHO89	P38361	574 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	MDM31	P38880	579 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	SHO1	P40073	367 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	YFR018C	P43599	363 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	MND1	P53102	219 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	RMD9	P53140	646 aa	Known RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	YMR209C	Q03648	457 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	YMR010W	Q03687	405 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	AIM33	Q04516	312 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	DIS3	Q08162	1001 aa	Known RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	YPR022C	Q12139	1133 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	YDR018C	Q12185	396 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	YOR214C	Q12282	236 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	MED11	Q99278	115 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	ATP6	P00854	259 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	GPH1	P06738	902 aa	Known RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	RIP1	P08067	215 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	PDX1	P16451	410 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	RVS161	P25343	265 aa	Known RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	CPR3	P25719	182 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	PMT2	P31382	759 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	PRP21	P32524	280 aa	Predicted RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	RGT1	P32862	1170 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	CYM1	P32898	989 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	SRB2	P34162	210 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	RSM22	P36056	628 aa		3.08	□□□□□ -1.92
VPS33	YLR396C	ANR2	P36090	516 aa	Predicted RBP	3.08	□□□□□ -1.92
VPS33	YLR396C	YBR137W	P38276	179 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms