RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C YLR108CQ12259 485 aa5.15□□□□□ -1.59
VPS1YKR001C PTC5Q12511 572 aa5.15□□□□□ -1.59
VPS1YKR001C ADH2P00331 348 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C MOD5P07884 428 aa5.14□□□□□ -1.59
VPS1YKR001C RPS18AP0CX55 146 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C RPS18BP0CX56 146 aaPredicted RBP5.14□□□□□ -1.59
VPS1YKR001C SAR1P20606 190 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C IDH2P28241 369 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C PET10P36139 283 aa5.14□□□□□ -1.59
VPS1YKR001C ZTA1P38230 334 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C EFM1P38732 585 aa5.14□□□□□ -1.59
VPS1YKR001C YER130CP39959 443 aa5.14□□□□□ -1.59
VPS1YKR001C LSM4P40070 187 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C POG1P40473 351 aa5.14□□□□□ -1.59
VPS1YKR001C SMK1P41808 388 aa5.14□□□□□ -1.59
VPS1YKR001C ADO1P47143 340 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C PYK2P52489 506 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C YGL185CP53100 379 aa5.14□□□□□ -1.59
VPS1YKR001C NMA2P53204 395 aa5.14□□□□□ -1.59
VPS1YKR001C HCH1P53834 153 aa5.14□□□□□ -1.59
VPS1YKR001C YNL140CP53910 189 aa5.14□□□□□ -1.59
VPS1YKR001C AQR1P53943 586 aa5.14□□□□□ -1.59
VPS1YKR001C SNO1Q03144 224 aa5.14□□□□□ -1.59
VPS1YKR001C PFA5Q03289 374 aa5.14□□□□□ -1.59
VPS1YKR001C ECM22Q05958 814 aaPredicted RBP5.14□□□□□ -1.59
VPS1YKR001C RPN13O13563 156 aa5.14□□□□□ -1.59
VPS1YKR001C GAL10P04397 699 aa5.14□□□□□ -1.59
VPS1YKR001C CDC33P07260 213 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C DFR1P07807 211 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
VPS1YKR001C IMA3P0CW40 589 aa5.14□□□□□ -1.59
VPS1YKR001C IMA4P0CW41 589 aa5.14□□□□□ -1.59
VPS1YKR001C VBA3P25594 458 aa5.14□□□□□ -1.59
VPS1YKR001C YCR051WP25631 222 aa5.14□□□□□ -1.59
VPS1YKR001C CDC50P25656 391 aa5.14□□□□□ -1.59
VPS1YKR001C UBC8P28263 218 aa5.14□□□□□ -1.59
VPS1YKR001C HEM12P32347 362 aaPredicted RBP5.14□□□□□ -1.59
VPS1YKR001C SKT5P34226 696 aa5.14□□□□□ -1.59
VPS1YKR001C YKL071WP36086 256 aa5.14□□□□□ -1.59
VPS1YKR001C SHM2P37291 469 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C NPP2P39997 493 aa5.14□□□□□ -1.59
VPS1YKR001C SSU1P41930 458 aa5.14□□□□□ -1.59
VPS1YKR001C EMW1P42842 904 aaKnown RBP5.14□□□□□ -1.59
VPS1YKR001C MRPL13Q02204 264 aa5.14□□□□□ -1.59
VPS1YKR001C TVP18Q04767 167 aa5.14□□□□□ -1.59
VPS1YKR001C TAF9Q05027 157 aa5.14□□□□□ -1.59
VPS1YKR001C IMA2Q08295 589 aa5.14□□□□□ -1.59
VPS1YKR001C YPL257WQ08974 193 aa5.14□□□□□ -1.59
VPS1YKR001C TMS1Q12116 473 aa5.14□□□□□ -1.59
VPS1YKR001C NDJ1Q12366 352 aa5.14□□□□□ -1.59
VPS1YKR001C ATP2P00830 511 aaKnown RBP5.13□□□□□ -1.59
VPS1YKR001C DDI2P0CH63 225 aa5.13□□□□□ -1.59
VPS1YKR001C DDI3P0CH64 225 aa5.13□□□□□ -1.59
VPS1YKR001C CCA1P21269 546 aa5.13□□□□□ -1.59
VPS1YKR001C EXG1P23776 448 aaKnown RBP5.13□□□□□ -1.59
VPS1YKR001C YCR061WP25639 631 aa5.13□□□□□ -1.59
VPS1YKR001C PPA2P28239 310 aa5.13□□□□□ -1.59
VPS1YKR001C ARO7P32178 256 aa5.13□□□□□ -1.59
VPS1YKR001C RML2P32611 393 aa5.13□□□□□ -1.59
VPS1YKR001C TIP20P33891 701 aa5.13□□□□□ -1.59
VPS1YKR001C PIN4P34217 668 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
VPS1YKR001C MRPL4P36517 319 aa5.13□□□□□ -1.59
VPS1YKR001C YBR056WP38081 501 aa5.13□□□□□ -1.59
VPS1YKR001C RRN10P38204 145 aa5.13□□□□□ -1.59
VPS1YKR001C WSC4P38739 605 aa5.13□□□□□ -1.59
VPS1YKR001C ELO3P40319 345 aa5.13□□□□□ -1.59
VPS1YKR001C YIL067CP40514 678 aa5.13□□□□□ -1.59
VPS1YKR001C MAD2P40958 196 aa5.13□□□□□ -1.59
VPS1YKR001C RPL10P41805 221 aaKnown RBP5.13□□□□□ -1.59
VPS1YKR001C PMT4P46971 762 aa5.13□□□□□ -1.59
VPS1YKR001C RPA34P47006 233 aaPredicted RBP5.13□□□□□ -1.59
VPS1YKR001C PHB2P50085 310 aa5.13□□□□□ -1.59
VPS1YKR001C YGL235WP53071 178 aa5.13□□□□□ -1.59
VPS1YKR001C GTF1P53260 183 aaPredicted RBP5.13□□□□□ -1.59
VPS1YKR001C YPL068CQ02749 293 aa5.13□□□□□ -1.59
VPS1YKR001C YMR209CQ03648 457 aa5.13□□□□□ -1.59
VPS1YKR001C SMP3Q04174 516 aa5.13□□□□□ -1.59
VPS1YKR001C PRM6Q04705 352 aa5.13□□□□□ -1.59
VPS1YKR001C YMR253CQ04835 414 aa5.13□□□□□ -1.59
VPS1YKR001C TMA10Q06177 86 aa5.13□□□□□ -1.59
VPS1YKR001C RIF2Q06208 395 aa5.13□□□□□ -1.59
VPS1YKR001C RAD34Q06665 692 aa5.13□□□□□ -1.59
VPS1YKR001C YPL066WQ12194 479 aa5.13□□□□□ -1.59
VPS1YKR001C RMP1Q12530 201 aa5.13□□□□□ -1.59
VPS1YKR001C YPT6Q99260 215 aa5.13□□□□□ -1.59
VPS1YKR001C SAS5Q99314 248 aa5.13□□□□□ -1.59
VPS1YKR001C YFR010W-AP0C5N0 62 aa5.12□□□□□ -1.59
VPS1YKR001C CDC34P14682 295 aa5.12□□□□□ -1.59
VPS1YKR001C SCL1P21243 252 aaKnown RBP5.12□□□□□ -1.59
VPS1YKR001C PEX4P29340 183 aa5.12□□□□□ -1.59
VPS1YKR001C LDS1P31379 325 aa5.12□□□□□ -1.59
VPS1YKR001C TKL2P33315 681 aa5.12□□□□□ -1.59
VPS1YKR001C CBT1P36038 271 aaPredicted RBP5.12□□□□□ -1.59
VPS1YKR001C APT2P36973 181 aa5.12□□□□□ -1.59
VPS1YKR001C COS12P53053 380 aa5.12□□□□□ -1.59
VPS1YKR001C YGL108CP53139 140 aa5.12□□□□□ -1.59
VPS1YKR001C YGR079WP53249 370 aa5.12□□□□□ -1.59
VPS1YKR001C NOP19P53317 196 aaPredicted RBP5.12□□□□□ -1.59
VPS1YKR001C YML096WQ04489 525 aa5.12□□□□□ -1.59
VPS1YKR001C YLR179CQ06252 201 aaKnown RBP5.12□□□□□ -1.59
VPS1YKR001C CYK3Q07533 885 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 650.6 ms