RNA–Protein interactions for RNA: YJL134W

LCB3, Transcript of Long-chain base-1-phosphate phosphatase, yeastyeast

Gene LCB3, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB3YJL134W EXG2P52911 562 aa5.84□□□□□ -1.47
LCB3YJL134W MEP3P53390 489 aa5.84□□□□□ -1.47
LCB3YJL134W SRP1Q02821 542 aaKnown RBP5.84□□□□□ -1.47
LCB3YJL134W GRX3Q03835 250 aa5.84□□□□□ -1.47
LCB3YJL134W FIN1Q03898 291 aa5.84□□□□□ -1.47
LCB3YJL134W TY1A-MR1Q04215 440 aa5.84□□□□□ -1.47
LCB3YJL134W RRN11Q04712 507 aa5.84□□□□□ -1.47
LCB3YJL134W NAT4Q04751 285 aa5.84□□□□□ -1.47
LCB3YJL134W SKI7Q08491 747 aaPredicted RBP5.84□□□□□ -1.47
LCB3YJL134W IRC13Q08630 104 aa5.84□□□□□ -1.47
LCB3YJL134W MED2Q12124 431 aa5.84□□□□□ -1.47
LCB3YJL134W YPR071WQ12346 211 aa5.84□□□□□ -1.47
LCB3YJL134W DCP1Q12517 231 aaPredicted RBP5.84□□□□□ -1.47
LCB3YJL134W TMA7Q3E764 64 aaKnown RBP5.84□□□□□ -1.47
LCB3YJL134W CBS1P14066 229 aa5.83□□□□□ -1.48
LCB3YJL134W GIT1P25346 518 aa5.83□□□□□ -1.48
LCB3YJL134W ARO7P32178 256 aa5.83□□□□□ -1.48
LCB3YJL134W CDC12P32468 407 aaKnown RBP5.83□□□□□ -1.48
LCB3YJL134W NDC1P32500 655 aa5.83□□□□□ -1.48
LCB3YJL134W ARC19P33204 171 aaKnown RBP5.83□□□□□ -1.48
LCB3YJL134W DHR2P36009 735 aaPredicted RBP5.83□□□□□ -1.48
LCB3YJL134W VPS51P36116 164 aa5.83□□□□□ -1.48
LCB3YJL134W GPX2P38143 162 aa5.83□□□□□ -1.48
LCB3YJL134W PEX18P38855 283 aa5.83□□□□□ -1.48
LCB3YJL134W NAB3P38996 802 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48 RIP-Chip
LCB3YJL134W PRP39P39682 629 aaKnown RBP5.83□□□□□ -1.48
LCB3YJL134W ZRG8P40021 1076 aa5.83□□□□□ -1.48
LCB3YJL134W BUR6P40096 142 aa5.83□□□□□ -1.48
LCB3YJL134W IRC7P43623 340 aa5.83□□□□□ -1.48
LCB3YJL134W BAT2P47176 376 aaKnown RBP5.83□□□□□ -1.48
LCB3YJL134W CWC23P52868 283 aaPredicted RBP5.83□□□□□ -1.48
LCB3YJL134W MPC1P53157 130 aaKnown RBP5.83□□□□□ -1.48
LCB3YJL134W BUD17P53727 317 aa5.83□□□□□ -1.48
LCB3YJL134W COS1P53822 381 aa5.83□□□□□ -1.48
LCB3YJL134W RCF1Q03713 159 aa5.83□□□□□ -1.48
LCB3YJL134W ERB1Q04660 807 aaKnown RBP5.83□□□□□ -1.48
LCB3YJL134W VID22Q05934 901 aa5.83□□□□□ -1.48
LCB3YJL134W NGL1Q08213 363 aaKnown RBP5.83□□□□□ -1.48
LCB3YJL134W UIP4Q08926 304 aa5.83□□□□□ -1.48
LCB3YJL134W RKM5Q12367 367 aa5.83□□□□□ -1.48
LCB3YJL134W CDC31P06704 161 aaKnown RBP5.82□□□□□ -1.48
LCB3YJL134W CAR2P07991 424 aaKnown RBP5.82□□□□□ -1.48
LCB3YJL134W MET2P08465 486 aa5.82□□□□□ -1.48
LCB3YJL134W RPL11AP0C0W9 174 aaKnown RBP5.82□□□□□ -1.48
LCB3YJL134W SAC7P17121 654 aa5.82□□□□□ -1.48
LCB3YJL134W RNQ1P25367 405 aa5.82□□□□□ -1.48
LCB3YJL134W CMK1P27466 446 aaKnown RBP5.82□□□□□ -1.48
LCB3YJL134W AUR1P36107 401 aaPredicted RBP5.82□□□□□ -1.48
LCB3YJL134W SRO77P38163 1010 aa5.82□□□□□ -1.48
LCB3YJL134W RPS20P38701 121 aaKnown RBP5.82□□□□□ -1.48
LCB3YJL134W FCY21P40039 528 aa5.82□□□□□ -1.48
LCB3YJL134W STB1P42845 420 aa5.82□□□□□ -1.48
LCB3YJL134W IBA57P47158 497 aa5.82□□□□□ -1.48
LCB3YJL134W IMD3P50095 523 aaKnown RBP5.82□□□□□ -1.48
LCB3YJL134W RAI1P53063 387 aaKnown RBP5.82□□□□□ -1.48
LCB3YJL134W LSG1P53145 640 aaKnown RBP5.82□□□□□ -1.48
LCB3YJL134W YGR045CP53229 120 aa5.82□□□□□ -1.48
LCB3YJL134W YKR011CQ02209 353 aa5.82□□□□□ -1.48
LCB3YJL134W REC102Q02721 264 aa5.82□□□□□ -1.48
LCB3YJL134W YPL068CQ02749 293 aa5.82□□□□□ -1.48
LCB3YJL134W RSM24Q03976 319 aa5.82□□□□□ -1.48
LCB3YJL134W URC2Q04411 772 aa5.82□□□□□ -1.48
LCB3YJL134W ELP6Q04868 273 aa5.82□□□□□ -1.48
LCB3YJL134W YEH1Q07804 573 aa5.82□□□□□ -1.48
LCB3YJL134W NOP12Q08208 459 aaKnown RBP5.82□□□□□ -1.48
LCB3YJL134W ACF2Q12168 779 aa5.82□□□□□ -1.48
LCB3YJL134W RPS21BQ3E754 87 aaKnown RBP5.82□□□□□ -1.48
LCB3YJL134W RPL11BQ3E757 174 aaPredicted RBP5.82□□□□□ -1.48
LCB3YJL134W NFT1P0CE68 1218 aa5.81□□□□□ -1.48
LCB3YJL134W APN1P22936 367 aa5.81□□□□□ -1.48
LCB3YJL134W YMC1P32331 307 aa5.81□□□□□ -1.48
LCB3YJL134W HOG1P32485 435 aa5.81□□□□□ -1.48
LCB3YJL134W NRP1P32770 719 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
LCB3YJL134W ORC2P32833 620 aa5.81□□□□□ -1.48
LCB3YJL134W YPT7P32939 208 aa5.81□□□□□ -1.48
LCB3YJL134W YOR062CP36025 268 aa5.81□□□□□ -1.48
LCB3YJL134W ECM34P38728 170 aa5.81□□□□□ -1.48
LCB3YJL134W YHR097CP38809 366 aaKnown RBP5.81□□□□□ -1.48
LCB3YJL134W TRR2P38816 342 aa5.81□□□□□ -1.48
LCB3YJL134W NVJ1P38881 321 aa5.81□□□□□ -1.48
LCB3YJL134W PCL6P40038 420 aa5.81□□□□□ -1.48
LCB3YJL134W GID8P40208 455 aa5.81□□□□□ -1.48
LCB3YJL134W TOS2P50078 622 aa5.81□□□□□ -1.48
LCB3YJL134W GPG1P53130 126 aa5.81□□□□□ -1.48
LCB3YJL134W CPR8P53728 308 aa5.81□□□□□ -1.48
LCB3YJL134W DBP6P53734 629 aaKnown RBP5.81□□□□□ -1.48
LCB3YJL134W CTL1Q03220 320 aaKnown RBP5.81□□□□□ -1.48
LCB3YJL134W YLR040CQ07988 224 aa5.81□□□□□ -1.48
LCB3YJL134W ALG6Q12001 544 aaKnown RBP5.81□□□□□ -1.48
LCB3YJL134W RCN2Q12044 265 aa5.81□□□□□ -1.48
LCB3YJL134W THP3Q12049 470 aaKnown RBP5.81□□□□□ -1.48
LCB3YJL134W TPO4Q12256 659 aa5.81□□□□□ -1.48
LCB3YJL134W YOR214CQ12282 236 aa5.81□□□□□ -1.48
LCB3YJL134W YOL162WP0CF19 215 aa5.8□□□□□ -1.48
LCB3YJL134W AAC3P18238 307 aa5.8□□□□□ -1.48
LCB3YJL134W HOP1P20050 605 aa5.8□□□□□ -1.48
LCB3YJL134W MCK1P21965 375 aaKnown RBP5.8□□□□□ -1.48
LCB3YJL134W SPC29P33419 253 aa5.8□□□□□ -1.48
LCB3YJL134W TOD6P34219 525 aa5.8□□□□□ -1.48
LCB3YJL134W AIM10P39965 576 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms