RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W ERD1P16151 362 aa1.93□□□□□ -2.1
SIR4YDR227W SCO1P23833 295 aa1.93□□□□□ -2.1
SIR4YDR227W RHB1P25378 209 aa1.93□□□□□ -2.1
SIR4YDR227W PHA2P32452 334 aa1.93□□□□□ -2.1
SIR4YDR227W PDC2P32896 925 aa1.93□□□□□ -2.1
SIR4YDR227W MYO3P36006 1272 aa1.93□□□□□ -2.1
SIR4YDR227W FMP23P38231 175 aa1.93□□□□□ -2.1
SIR4YDR227W YER186CP40101 306 aa1.93□□□□□ -2.1
SIR4YDR227W SCD6P45978 349 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SIR4YDR227W YGR042WP53227 271 aa1.93□□□□□ -2.1
SIR4YDR227W RTT102P53330 157 aa1.93□□□□□ -2.1
SIR4YDR227W CWC25P53854 179 aaKnown RBP1.93□□□□□ -2.1
SIR4YDR227W NRG1Q03125 231 aa1.93□□□□□ -2.1
SIR4YDR227W RPC11Q04307 110 aaPredicted RBP1.93□□□□□ -2.1
SIR4YDR227W YMR034CQ05131 434 aaPredicted RBP1.93□□□□□ -2.1
SIR4YDR227W INM2Q05533 292 aa1.93□□□□□ -2.1
SIR4YDR227W NNT1Q05874 261 aa1.93□□□□□ -2.1
SIR4YDR227W YDL144CQ07589 356 aa1.93□□□□□ -2.1
SIR4YDR227W ACF2Q12168 779 aa1.93□□□□□ -2.1
SIR4YDR227W UBA3Q99344 299 aa1.93□□□□□ -2.1
SIR4YDR227W MET16P18408 261 aaPredicted RBP1.93□□□□□ -2.1
SIR4YDR227W PRP4P20053 465 aaKnown RBP1.93□□□□□ -2.1
SIR4YDR227W DSS4P32601 143 aa1.93□□□□□ -2.1
SIR4YDR227W ZRT1P32804 376 aa1.93□□□□□ -2.1
SIR4YDR227W LOS1P33418 1100 aaPredicted RBP1.93□□□□□ -2.1
SIR4YDR227W RPC25P35718 212 aa1.93□□□□□ -2.1
SIR4YDR227W DBP8P38719 431 aa1.93□□□□□ -2.1
SIR4YDR227W WSC4P38739 605 aa1.93□□□□□ -2.1
SIR4YDR227W NPT1P39683 429 aaKnown RBP1.93□□□□□ -2.1
SIR4YDR227W JLP2P40206 208 aa1.93□□□□□ -2.1
SIR4YDR227W YGR201CP42936 225 aa1.93□□□□□ -2.1
SIR4YDR227W YGL108CP53139 140 aa1.93□□□□□ -2.1
SIR4YDR227W COG7P53195 279 aa1.93□□□□□ -2.1
SIR4YDR227W IMO32P53219 342 aa1.93□□□□□ -2.1
SIR4YDR227W YNL260CP53846 198 aa1.93□□□□□ -2.1
SIR4YDR227W BET4Q00618 327 aa1.93□□□□□ -2.1
SIR4YDR227W SSY1Q03770 852 aa1.93□□□□□ -2.1
SIR4YDR227W NDE2Q07500 545 aa1.93□□□□□ -2.1
SIR4YDR227W YDL218WQ07629 317 aa1.93□□□□□ -2.1
SIR4YDR227W PLB3Q08108 686 aa1.93□□□□□ -2.1
SIR4YDR227W MES1P00958 751 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W NFT1P0CE68 1218 aa1.92□□□□□ -2.1
SIR4YDR227W PET54P10834 293 aa1.92□□□□□ -2.1
SIR4YDR227W APE2P32454 952 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W SRP102P36057 244 aaPredicted RBP1.92□□□□□ -2.1
SIR4YDR227W GMH1P36125 273 aa1.92□□□□□ -2.1
SIR4YDR227W FZO1P38297 855 aa1.92□□□□□ -2.1
SIR4YDR227W PRS2P38620 318 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W PET100P38958 111 aa1.92□□□□□ -2.1
SIR4YDR227W FRT2P39734 528 aa1.92□□□□□ -2.1
SIR4YDR227W COX15P40086 486 aa1.92□□□□□ -2.1
SIR4YDR227W CIN1P40987 1014 aa1.92□□□□□ -2.1
SIR4YDR227W ADO1P47143 340 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W YPT32P51996 222 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W ASI2P53895 289 aa1.92□□□□□ -2.1
SIR4YDR227W YDR476CQ03362 224 aa1.92□□□□□ -2.1
SIR4YDR227W AIM34Q03673 198 aa1.92□□□□□ -2.1
SIR4YDR227W ARO80Q04052 950 aa1.92□□□□□ -2.1
SIR4YDR227W PEX10Q05568 337 aa1.92□□□□□ -2.1
SIR4YDR227W SYO1Q07395 620 aa1.92□□□□□ -2.1
SIR4YDR227W MED7Q08278 222 aa1.92□□□□□ -2.1
SIR4YDR227W RAX1Q08760 435 aa1.92□□□□□ -2.1
SIR4YDR227W ELG1Q12050 791 aa1.92□□□□□ -2.1
SIR4YDR227W NBL1Q3E7Y6 73 aa1.92□□□□□ -2.1
SIR4YDR227W ILV1P00927 576 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W PUT2P07275 575 aa1.92□□□□□ -2.1
SIR4YDR227W SPT15P13393 240 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W RNR3P21672 869 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W RRT12P25381 491 aa1.92□□□□□ -2.1
SIR4YDR227W BUB2P26448 306 aaPredicted RBP1.92□□□□□ -2.1
SIR4YDR227W RIB1P38066 345 aa1.92□□□□□ -2.1
SIR4YDR227W MED6P38782 295 aa1.92□□□□□ -2.1
SIR4YDR227W YMR147WP40218 223 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W PFA3P42836 336 aa1.92□□□□□ -2.1
SIR4YDR227W ECL1P48235 211 aa1.92□□□□□ -2.1
SIR4YDR227W RBS1Q05672 457 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W VTA1Q06263 330 aa1.92□□□□□ -2.1
SIR4YDR227W POM34Q12445 299 aa1.92□□□□□ -2.1
SIR4YDR227W COR1P07256 457 aa1.92□□□□□ -2.1
SIR4YDR227W DFR1P07807 211 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
SIR4YDR227W KIN82P25341 720 aa1.92□□□□□ -2.1
SIR4YDR227W SOR1P35497 357 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W PRY2P36110 329 aa1.92□□□□□ -2.1
SIR4YDR227W RPL32P38061 130 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W IML3P38265 245 aa1.92□□□□□ -2.1
SIR4YDR227W SSZ1P38788 538 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W CIN5P40917 295 aa1.92□□□□□ -2.1
SIR4YDR227W MSS2P40990 351 aa1.92□□□□□ -2.1
SIR4YDR227W IRC5P43610 853 aa1.92□□□□□ -2.1
SIR4YDR227W RPS10BP46784 105 aaKnown RBP1.92□□□□□ -2.1
SIR4YDR227W ASI3P53983 676 aa1.92□□□□□ -2.1
SIR4YDR227W YMR209CQ03648 457 aa1.92□□□□□ -2.1
SIR4YDR227W RCO1Q04779 684 aa1.92□□□□□ -2.1
SIR4YDR227W THI20Q08224 551 aa1.92□□□□□ -2.1
SIR4YDR227W THI72Q08579 599 aa1.92□□□□□ -2.1
SIR4YDR227W RPS10AQ08745 105 aaPredicted RBP1.92□□□□□ -2.1
SIR4YDR227W PEX11Q12462 236 aa1.92□□□□□ -2.1
SIR4YDR227W MYO1P08964 1928 aa1.91□□□□□ -2.1
SIR4YDR227W YBR121C-AP0C5L4 52 aa1.91□□□□□ -2.1
SIR4YDR227W NHP6AP11632 93 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms