RNA–Protein interactions for RNA: YDR142C

PEX7, Transcript of Peroxisomal signal receptor for peroxisomal matrix proteins, yeast

Gene PEX7, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX7	YDR142C	CAT8	P39113	1433 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	SSC1	P0CS90	654 aa	Known RBP	4.98	□□□□□ -1.61
PEX7	YDR142C	YER190C-B	P0CX94	160 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	YEL077W-A	P0CX95	160 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	YGR296C-B	P0CX96	160 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	YPL283W-B	P0CX97	160 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	YPR204C-A	P0CX98	160 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	CAP2	P13517	287 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	FRS2	P15625	503 aa	Known RBP	4.98	□□□□□ -1.61
PEX7	YDR142C	EXG1	P23776	448 aa	Known RBP	4.98	□□□□□ -1.61
PEX7	YDR142C	PRO3	P32263	286 aa	Known RBP	4.98	□□□□□ -1.61
PEX7	YDR142C	BMH2	P34730	273 aa	Known RBP	4.98	□□□□□ -1.61
PEX7	YDR142C	YKR015C	P36111	568 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	CHK1	P38147	527 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	HIS2	P38635	335 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	ATG7	P38862	630 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	RRT5	P43607	289 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	KEG1	P43614	200 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	KAP114	P53067	1004 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	CGR1	P53188	120 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	PXR1	P53335	271 aa	Predicted RBP	4.98	□□□□□ -1.61
PEX7	YDR142C	TRM112	P53738	135 aa	Predicted RBP	4.98	□□□□□ -1.61
PEX7	YDR142C	COX20	Q04935	205 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	AHC1	Q12433	566 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	CSR2	Q12734	1121 aa		4.98	□□□□□ -1.61
PEX7	YDR142C	MSF1	P08425	469 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	GLN3	P18494	730 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	DCC1	P25559	380 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	ERG9	P29704	444 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	ARO4	P32449	370 aa	Known RBP	4.97	□□□□□ -1.61
PEX7	YDR142C	GCG1	P32656	232 aa	Known RBP	4.97	□□□□□ -1.61
PEX7	YDR142C	PRS1	P32895	427 aa	Known RBP	4.97	□□□□□ -1.61
PEX7	YDR142C	PTR2	P32901	601 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	GPX2	P38143	162 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	SBE22	P38814	852 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	RTR1	P40084	226 aa	Predicted RBP	4.97	□□□□□ -1.61
PEX7	YDR142C	ALG8	P40351	577 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	BIO3	P50277	480 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	BIO4	P53630	237 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	STP1	Q00947	519 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	ATG38	Q05789	226 aa	Known RBP	4.97	□□□□□ -1.61
PEX7	YDR142C	GMC2	Q06201	188 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	CTS2	Q06350	511 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	YRM1	Q12340	786 aa		4.97	□□□□□ -1.61
PEX7	YDR142C	GEA1	P47102	1408 aa	Predicted RBP	4.97	□□□□□ -1.61
PEX7	YDR142C	SLY1	P22213	666 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	POP5	P28005	173 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	IMP3	P32899	183 aa	Predicted RBP	4.96	□□□□□ -1.62
PEX7	YDR142C	TIR2	P33890	251 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
PEX7	YDR142C	YER085C	P40058	173 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	DIM1	P41819	318 aa	Known RBP	4.96	□□□□□ -1.62
PEX7	YDR142C	IKS1	P47042	667 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	AIM24	P47127	394 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	ABM1	P47146	123 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	TIM21	P53220	239 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	OKP1	P53298	406 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	MKC7	P53379	596 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	PIR3	Q03180	325 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	BER1	Q06688	274 aa	Known RBP	4.96	□□□□□ -1.62
PEX7	YDR142C	GAT3	Q07928	141 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	ALE1	Q08548	619 aa		4.96	□□□□□ -1.62
PEX7	YDR142C	ITR2	P30606	609 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	YHK8	P38776	514 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	SHQ1	P40486	507 aa	Predicted RBP	4.95	□□□□□ -1.62
PEX7	YDR142C	YIR016W	P40572	265 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	MSS2	P40990	351 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	YAR1	P46683	200 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	YJL118W	P47022	219 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	MDV1	P47025	714 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	CAF40	P53829	373 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	NDE2	Q07500	545 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	BSC6	Q08280	497 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	SNX3	Q08826	162 aa	Known RBP	4.95	□□□□□ -1.62
PEX7	YDR142C	YPQ1	Q12010	308 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	RGT2	Q12300	763 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	SET6	Q12529	373 aa		4.95	□□□□□ -1.62
PEX7	YDR142C	MEX67	Q99257	599 aa	Known RBP	4.95	□□□□□ -1.62
PEX7	YDR142C	CFT1	Q06632	1357 aa	Known RBP	4.94	□□□□□ -1.62
PEX7	YDR142C	QCR6	P00127	147 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
PEX7	YDR142C	COX2	P00410	251 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	MTF1	P14908	341 aa	Known RBP	4.94	□□□□□ -1.62
PEX7	YDR142C	POL30	P15873	258 aa	Known RBP	4.94	□□□□□ -1.62
PEX7	YDR142C	YSR3	P23501	404 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	RVS161	P25343	265 aa	Known RBP	4.94	□□□□□ -1.62
PEX7	YDR142C	YCR016W	P25617	290 aa	Known RBP	4.94	□□□□□ -1.62
PEX7	YDR142C	YCR022C	P25620	114 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	MKK1	P32490	508 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	TRS65	P32893	560 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
PEX7	YDR142C	COS9	P36034	407 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	RIB5	P38145	238 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	PRM9	P39551	298 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	AIM10	P39965	576 aa	Known RBP	4.94	□□□□□ -1.62
PEX7	YDR142C	TRF5	P48561	642 aa	Known RBP	4.94	□□□□□ -1.62
PEX7	YDR142C	SEH1	P53011	349 aa	Known RBP	4.94	□□□□□ -1.62
PEX7	YDR142C	PGA2	P53903	129 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	RPM2	Q02773	1202 aa		4.94	□□□□□ -1.62
PEX7	YDR142C	CSM3	Q04659	317 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms