RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W CSM3Q04659 317 aa5.32□□□□□ -1.56
VMS1YDR049W ASR1Q06834 288 aa5.32□□□□□ -1.56
VMS1YDR049W YOR387CQ08910 206 aa5.32□□□□□ -1.56
VMS1YDR049W YPL199CQ08954 240 aa5.32□□□□□ -1.56
VMS1YDR049W SFM1Q12314 213 aa5.32□□□□□ -1.56
VMS1YDR049W SWM1Q12379 170 aa5.32□□□□□ -1.56
VMS1YDR049W SNQ2P32568 1501 aaKnown RBP5.32□□□□□ -1.56
VMS1YDR049W HIS1P00498 297 aaKnown RBP5.32□□□□□ -1.56
VMS1YDR049W RPL12AP0CX53 165 aaKnown RBP5.32□□□□□ -1.56
VMS1YDR049W RPL12BP0CX54 165 aa5.32□□□□□ -1.56
VMS1YDR049W RPB8P20436 146 aa5.32□□□□□ -1.56
VMS1YDR049W MXR2P25566 168 aa5.32□□□□□ -1.56
VMS1YDR049W POP5P28005 173 aa5.32□□□□□ -1.56
VMS1YDR049W MSS1P32559 526 aaPredicted RBP5.32□□□□□ -1.56
VMS1YDR049W CDC5P32562 705 aa5.32□□□□□ -1.56
VMS1YDR049W BCS1P32839 456 aa5.32□□□□□ -1.56
VMS1YDR049W MYO3P36006 1272 aa5.32□□□□□ -1.56
VMS1YDR049W MRX3P38172 270 aa5.32□□□□□ -1.56
VMS1YDR049W PRS2P38620 318 aaKnown RBP5.32□□□□□ -1.56
VMS1YDR049W SEN34P39707 275 aa5.32□□□□□ -1.56
VMS1YDR049W MMF1P40185 145 aaKnown RBP5.32□□□□□ -1.56
VMS1YDR049W QRI1P43123 477 aaKnown RBP5.32□□□□□ -1.56
VMS1YDR049W PMT5P52867 743 aa5.32□□□□□ -1.56
VMS1YDR049W SED5Q01590 340 aa5.32□□□□□ -1.56
VMS1YDR049W RIF2Q06208 395 aa5.32□□□□□ -1.56
VMS1YDR049W TY1A-BLQ12266 440 aa5.32□□□□□ -1.56
VMS1YDR049W SIR3P06701 978 aa5.31□□□□□ -1.56
VMS1YDR049W NAM2P11325 894 aa5.31□□□□□ -1.56
VMS1YDR049W ITR2P30606 609 aa5.31□□□□□ -1.56
VMS1YDR049W DRE2P36152 348 aa5.31□□□□□ -1.56
VMS1YDR049W YJR011CP47086 261 aaPredicted RBP5.31□□□□□ -1.56
VMS1YDR049W YJR054WP47114 497 aa5.31□□□□□ -1.56
VMS1YDR049W AIM24P47127 394 aa5.31□□□□□ -1.56
VMS1YDR049W YJR111CP47148 283 aaKnown RBP5.31□□□□□ -1.56
VMS1YDR049W ERG26P53199 349 aaKnown RBP5.31□□□□□ -1.56
VMS1YDR049W YPR003CP53394 754 aa5.31□□□□□ -1.56
VMS1YDR049W BUD17P53727 317 aa5.31□□□□□ -1.56
VMS1YDR049W ERG13P54839 491 aaKnown RBP5.31□□□□□ -1.56
VMS1YDR049W SNO1Q03144 224 aa5.31□□□□□ -1.56
VMS1YDR049W NUP53Q03790 475 aa5.31□□□□□ -1.56
VMS1YDR049W ARO80Q04052 950 aa5.31□□□□□ -1.56
VMS1YDR049W HPF1Q05164 967 aa5.31□□□□□ -1.56
VMS1YDR049W RFU1Q08003 200 aa5.31□□□□□ -1.56
VMS1YDR049W URA6P15700 204 aa5.3□□□□□ -1.56
VMS1YDR049W AMD2P22580 549 aa5.3□□□□□ -1.56
VMS1YDR049W PRX1P34227 261 aaKnown RBP5.3□□□□□ -1.56
VMS1YDR049W BNA4P38169 460 aa5.3□□□□□ -1.56
VMS1YDR049W SHG1P38337 142 aa5.3□□□□□ -1.56
VMS1YDR049W NPT1P39683 429 aaKnown RBP5.3□□□□□ -1.56
VMS1YDR049W YER079WP40052 210 aaKnown RBP5.3□□□□□ -1.56
VMS1YDR049W LAS21P40367 830 aa5.3□□□□□ -1.56
VMS1YDR049W LYS12P40495 371 aaKnown RBP5.3□□□□□ -1.56
VMS1YDR049W MRPL22P53881 309 aa5.3□□□□□ -1.56
VMS1YDR049W RGC1Q06108 1083 aaKnown RBP5.3□□□□□ -1.56
VMS1YDR049W YDL242WQ07746 117 aa5.3□□□□□ -1.56
VMS1YDR049W NSL1Q12143 216 aa5.3□□□□□ -1.56
VMS1YDR049W ERP3Q12403 225 aa5.3□□□□□ -1.56
VMS1YDR049W ATP6P00854 259 aa5.3□□□□□ -1.56
VMS1YDR049W OPI3P05375 206 aa5.3□□□□□ -1.56
VMS1YDR049W PEP4P07267 405 aaKnown RBP5.3□□□□□ -1.56
VMS1YDR049W CHO1P08456 276 aa5.3□□□□□ -1.56
VMS1YDR049W PTP1P25044 335 aa5.3□□□□□ -1.56
VMS1YDR049W FUB1P25659 250 aa5.3□□□□□ -1.56
VMS1YDR049W CAM1P29547 415 aaKnown RBP5.3□□□□□ -1.56
VMS1YDR049W NUP2P32499 720 aa5.3□□□□□ -1.56
VMS1YDR049W PHM8P40025 321 aa5.3□□□□□ -1.56
VMS1YDR049W DDI1P40087 428 aa5.3□□□□□ -1.56
VMS1YDR049W BMT5P40493 336 aa5.3□□□□□ -1.56
VMS1YDR049W URM1P40554 99 aaPredicted RBP5.3□□□□□ -1.56
VMS1YDR049W UFE1P41834 346 aa5.3□□□□□ -1.56
VMS1YDR049W IDP2P41939 412 aa5.3□□□□□ -1.56
VMS1YDR049W CIN2P46670 268 aa5.3□□□□□ -1.56
VMS1YDR049W NBP35P52920 328 aa5.3□□□□□ -1.56
VMS1YDR049W MGA1P53050 456 aa5.3□□□□□ -1.56
VMS1YDR049W YNR066CP53752 436 aa5.3□□□□□ -1.56
VMS1YDR049W TRM13Q12383 476 aa5.3□□□□□ -1.56
VMS1YDR049W GAL10P04397 699 aa5.29□□□□□ -1.56
VMS1YDR049W LAC1P28496 418 aa5.29□□□□□ -1.56
VMS1YDR049W EHD3P28817 500 aa5.29□□□□□ -1.56
VMS1YDR049W UPS2P35200 230 aa5.29□□□□□ -1.56
VMS1YDR049W SAS2P40963 338 aa5.29□□□□□ -1.56
VMS1YDR049W POP1P41812 875 aa5.29□□□□□ -1.56
VMS1YDR049W ADO1P47143 340 aaKnown RBP5.29□□□□□ -1.56
VMS1YDR049W AZR1P50080 613 aa5.29□□□□□ -1.56
VMS1YDR049W VEL1P53058 206 aa5.29□□□□□ -1.56
VMS1YDR049W OKP1P53298 406 aa5.29□□□□□ -1.56
VMS1YDR049W MKC7P53379 596 aa5.29□□□□□ -1.56
VMS1YDR049W CWC25P53854 179 aaKnown RBP5.29□□□□□ -1.56
VMS1YDR049W EMI2Q04409 500 aaKnown RBP5.29□□□□□ -1.56
VMS1YDR049W TMN2Q04562 672 aa5.29□□□□□ -1.56
VMS1YDR049W PBP4Q07362 185 aaKnown RBP5.29□□□□□ -1.56
VMS1YDR049W ALE1Q08548 619 aa5.29□□□□□ -1.56
VMS1YDR049W YPQ1Q12010 308 aa5.29□□□□□ -1.56
VMS1YDR049W YOR114WQ12219 294 aa5.29□□□□□ -1.56
VMS1YDR049W RPN6Q12377 434 aa5.29□□□□□ -1.56
VMS1YDR049W CDC25P04821 1589 aa5.29□□□□□ -1.56
VMS1YDR049W RPP2AP05319 106 aaKnown RBP5.28□□□□□ -1.56
VMS1YDR049W RPS28BP0C0X0 67 aaKnown RBP5.28□□□□□ -1.56
VMS1YDR049W PPZ2P33329 710 aa5.28□□□□□ -1.56
VMS1YDR049W SHP1P34223 423 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms