RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W YIL054WP40524 105 aa1.94□□□□□ -2.1
UBP1YDL122W URB2P47108 1174 aa1.94□□□□□ -2.1
UBP1YDL122W COG2P53271 262 aa1.94□□□□□ -2.1
UBP1YDL122W MNT4P53745 580 aa1.94□□□□□ -2.1
UBP1YDL122W RHO5P53879 331 aaKnown RBP1.94□□□□□ -2.1
UBP1YDL122W ERV25P54837 211 aaKnown RBP1.94□□□□□ -2.1
UBP1YDL122W SKO1Q02100 647 aa1.94□□□□□ -2.1
UBP1YDL122W RTC5Q12108 567 aaKnown RBP1.94□□□□□ -2.1
UBP1YDL122W YDL007C-AQ2V2Q0 85 aa1.94□□□□□ -2.1
UBP1YDL122W IZH4Q99393 312 aa1.94□□□□□ -2.1
UBP1YDL122W ILV2P07342 687 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W YCP4P25349 247 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W YEF1P32622 495 aa1.93□□□□□ -2.1
UBP1YDL122W TIP20P33891 701 aa1.93□□□□□ -2.1
UBP1YDL122W YNK1P36010 153 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W VBA2P38358 474 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W GRE3P38715 327 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
UBP1YDL122W YHR127WP38833 243 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W PTH1P38876 190 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W AIM18P38884 321 aa1.93□□□□□ -2.1
UBP1YDL122W PHM8P40025 321 aa1.93□□□□□ -2.1
UBP1YDL122W SOK1P40317 901 aa1.93□□□□□ -2.1
UBP1YDL122W APT1P49435 187 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W SHE4P51534 789 aa1.93□□□□□ -2.1
UBP1YDL122W KAP114P53067 1004 aa1.93□□□□□ -2.1
UBP1YDL122W MPS2P53159 387 aa1.93□□□□□ -2.1
UBP1YDL122W ESBP6P53918 673 aa1.93□□□□□ -2.1
UBP1YDL122W ACL4Q03771 387 aa1.93□□□□□ -2.1
UBP1YDL122W API2Q04413 109 aa1.93□□□□□ -2.1
UBP1YDL122W MFG1Q07684 458 aa1.93□□□□□ -2.1
UBP1YDL122W RDR1Q08904 546 aa1.93□□□□□ -2.1
UBP1YDL122W AEP3Q12089 606 aa1.93□□□□□ -2.1
UBP1YDL122W RDL1Q12305 139 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W TRM13Q12383 476 aa1.93□□□□□ -2.1
UBP1YDL122W RAX2Q12465 1220 aa1.93□□□□□ -2.1
UBP1YDL122W RRP36Q12481 300 aaPredicted RBP1.93□□□□□ -2.1
UBP1YDL122W TFB5Q3E7C1 72 aaPredicted RBP1.93□□□□□ -2.1
UBP1YDL122W YER190C-BP0CX94 160 aa1.93□□□□□ -2.1
UBP1YDL122W YEL077W-AP0CX95 160 aa1.93□□□□□ -2.1
UBP1YDL122W YGR296C-BP0CX96 160 aa1.93□□□□□ -2.1
UBP1YDL122W YPL283W-BP0CX97 160 aa1.93□□□□□ -2.1
UBP1YDL122W YPR204C-AP0CX98 160 aa1.93□□□□□ -2.1
UBP1YDL122W YFL068WP0CX99 160 aa1.93□□□□□ -2.1
UBP1YDL122W YLL066W-AP0CY00 160 aa1.93□□□□□ -2.1
UBP1YDL122W YLL067W-AP0CY01 160 aa1.93□□□□□ -2.1
UBP1YDL122W CTA1P15202 515 aa1.93□□□□□ -2.1
UBP1YDL122W ERD1P16151 362 aa1.93□□□□□ -2.1
UBP1YDL122W ERG4P25340 473 aa1.93□□□□□ -2.1
UBP1YDL122W BOS1P25385 244 aa1.93□□□□□ -2.1
UBP1YDL122W YBL055CP34220 418 aaPredicted RBP1.93□□□□□ -2.1
UBP1YDL122W RRP1P35178 278 aaPredicted RBP1.93□□□□□ -2.1
UBP1YDL122W TPO5P36029 618 aa1.93□□□□□ -2.1
UBP1YDL122W ADE17P38009 592 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W PCH2P38126 564 aa1.93□□□□□ -2.1
UBP1YDL122W BZZ1P38822 633 aa1.93□□□□□ -2.1
UBP1YDL122W TES1P41903 349 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W PMT6P42934 759 aa1.93□□□□□ -2.1
UBP1YDL122W NCA3P46955 337 aa1.93□□□□□ -2.1
UBP1YDL122W RPE1P46969 238 aa1.93□□□□□ -2.1
UBP1YDL122W BUL1P48524 976 aa1.93□□□□□ -2.1
UBP1YDL122W ERG26P53199 349 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W RLI1Q03195 608 aaKnown RBP1.93□□□□□ -2.1
UBP1YDL122W YMR130WQ04223 302 aa1.93□□□□□ -2.1
UBP1YDL122W COS7Q07788 383 aa1.93□□□□□ -2.1
UBP1YDL122W MED2Q12124 431 aa1.93□□□□□ -2.1
UBP1YDL122W SPS4P09937 338 aa1.92□□□□□ -2.1
UBP1YDL122W RPL31BP0C2H9 113 aaKnown RBP1.92□□□□□ -2.1
UBP1YDL122W CHA1P25379 360 aaKnown RBP1.92□□□□□ -2.1
UBP1YDL122W SPS22P25380 463 aa1.92□□□□□ -2.1
UBP1YDL122W MRPL9P31334 269 aa1.92□□□□□ -2.1
UBP1YDL122W PPQ1P32945 549 aa1.92□□□□□ -2.1
UBP1YDL122W YBR220CP38318 560 aa1.92□□□□□ -2.1
UBP1YDL122W RCY1P39531 840 aa1.92□□□□□ -2.1
UBP1YDL122W RRT5P43607 289 aa1.92□□□□□ -2.1
UBP1YDL122W BIO3P50277 480 aa1.92□□□□□ -2.1
UBP1YDL122W YGR067CP53243 804 aa1.92□□□□□ -2.1
UBP1YDL122W RNT1Q02555 471 aa1.92□□□□□ -2.1
UBP1YDL122W RPN9Q04062 393 aaKnown RBP1.92□□□□□ -2.1
UBP1YDL122W MRPL1Q04599 285 aa1.92□□□□□ -2.1
UBP1YDL122W SRL2Q12020 392 aa1.92□□□□□ -2.1
UBP1YDL122W UBX3Q12229 455 aa1.92□□□□□ -2.1
UBP1YDL122W CDC33P07260 213 aaKnown RBP1.92□□□□□ -2.1
UBP1YDL122W YHR214C-DP0CX93 97 aa1.92□□□□□ -2.1
UBP1YDL122W PEP5P12868 1029 aa1.92□□□□□ -2.1
UBP1YDL122W RSR1P13856 272 aa1.92□□□□□ -2.1
UBP1YDL122W SEC14P24280 304 aaKnown RBP1.92□□□□□ -2.1
UBP1YDL122W PHO91P27514 894 aa1.92□□□□□ -2.1
UBP1YDL122W AFG1P32317 509 aa1.92□□□□□ -2.1
UBP1YDL122W MRPL4P36517 319 aa1.92□□□□□ -2.1
UBP1YDL122W ASC1P38011 319 aaKnown RBP1.92□□□□□ -2.1
UBP1YDL122W EFM2P38347 419 aa1.92□□□□□ -2.1
UBP1YDL122W ARG2P40360 574 aa1.92□□□□□ -2.1
UBP1YDL122W APS3P47064 194 aa1.92□□□□□ -2.1
UBP1YDL122W YDR179W-AQ03983 463 aa1.92□□□□□ -2.1
UBP1YDL122W MIX14Q04341 121 aa1.92□□□□□ -2.1
UBP1YDL122W PHO92Q06390 306 aa1.92□□□□□ -2.1
UBP1YDL122W ETT1Q08421 412 aaKnown RBP1.92□□□□□ -2.1
UBP1YDL122W ARG81P05085 880 aa1.91□□□□□ -2.1
UBP1YDL122W PDE2P06776 526 aa1.91□□□□□ -2.1
UBP1YDL122W ALG7P07286 448 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms