RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W MRP51Q02950 344 aa2.09□□□□□ -2.07
MCD1YDL003W YMD8Q03697 442 aa2.09□□□□□ -2.07
MCD1YDL003W TRM12Q04235 462 aa2.09□□□□□ -2.07
MCD1YDL003W PLM2Q04383 521 aa2.09□□□□□ -2.07
MCD1YDL003W MDM30Q05930 598 aa2.09□□□□□ -2.07
MCD1YDL003W BOP2Q06150 570 aa2.09□□□□□ -2.07
MCD1YDL003W YLR173WQ06247 608 aa2.09□□□□□ -2.07
MCD1YDL003W GPN3Q06543 272 aa2.09□□□□□ -2.07
MCD1YDL003W DIB1Q06819 143 aaPredicted RBP2.09□□□□□ -2.07
MCD1YDL003W SAM4Q08985 325 aaKnown RBP2.09□□□□□ -2.07
MCD1YDL003W NMD4Q12129 218 aa2.09□□□□□ -2.07
MCD1YDL003W SPC3Q12133 184 aa2.09□□□□□ -2.07
MCD1YDL003W ATP14Q12349 124 aa2.09□□□□□ -2.07
MCD1YDL003W PCC1Q3E833 88 aa2.09□□□□□ -2.07
MCD1YDL003W SUS1Q6WNK7 96 aa2.09□□□□□ -2.07
MCD1YDL003W RGS2Q99188 309 aa2.09□□□□□ -2.07
MCD1YDL003W STE2D6VTK4 431 aa2.08□□□□□ -2.08
MCD1YDL003W GAL4P04386 881 aa2.08□□□□□ -2.08
MCD1YDL003W LEU4P06208 619 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W ATP1P07251 545 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W SPS2P08459 502 aa2.08□□□□□ -2.08
MCD1YDL003W PDX1P16451 410 aa2.08□□□□□ -2.08
MCD1YDL003W IDP1P21954 428 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W APA2P22108 325 aa2.08□□□□□ -2.08
MCD1YDL003W YCL049CP25577 312 aa2.08□□□□□ -2.08
MCD1YDL003W URA10P30402 227 aa2.08□□□□□ -2.08
MCD1YDL003W MCM10P32354 571 aa2.08□□□□□ -2.08
MCD1YDL003W ATP11P32453 318 aa2.08□□□□□ -2.08
MCD1YDL003W GSH1P32477 678 aa2.08□□□□□ -2.08
MCD1YDL003W SPS19P32573 292 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W VPS17P32913 551 aa2.08□□□□□ -2.08
MCD1YDL003W PTC1P35182 281 aa2.08□□□□□ -2.08
MCD1YDL003W YNK1P36010 153 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W TUL1P36096 758 aa2.08□□□□□ -2.08
MCD1YDL003W MRPL37P36532 105 aa2.08□□□□□ -2.08
MCD1YDL003W MBA1P38300 278 aa2.08□□□□□ -2.08
MCD1YDL003W ERV15P38312 142 aa2.08□□□□□ -2.08
MCD1YDL003W NVJ1P38881 321 aa2.08□□□□□ -2.08
MCD1YDL003W AIM18P38884 321 aa2.08□□□□□ -2.08
MCD1YDL003W AFG3P39925 761 aa2.08□□□□□ -2.08
MCD1YDL003W GIM4P40005 111 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W YER010CP40011 234 aa2.08□□□□□ -2.08
MCD1YDL003W RGI1P40043 161 aaPredicted RBP2.08□□□□□ -2.08
MCD1YDL003W LAS21P40367 830 aa2.08□□□□□ -2.08
MCD1YDL003W ASG7P46993 209 aa2.08□□□□□ -2.08
MCD1YDL003W ABM1P47146 123 aa2.08□□□□□ -2.08
MCD1YDL003W SNN1P48232 102 aa2.08□□□□□ -2.08
MCD1YDL003W SEH1P53011 349 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W DOC1P53068 250 aa2.08□□□□□ -2.08
MCD1YDL003W YGL039WP53183 348 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W LSM7P53905 115 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W ERV25P54837 211 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W RPA49Q01080 415 aaPredicted RBP2.08□□□□□ -2.08
MCD1YDL003W ELP3Q02908 557 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W ERO1Q03103 563 aa2.08□□□□□ -2.08
MCD1YDL003W YMR099CQ03161 297 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W RLI1Q03195 608 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W MRPS17Q03246 237 aaPredicted RBP2.08□□□□□ -2.08
MCD1YDL003W HPT1Q04178 221 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W YMR130WQ04223 302 aa2.08□□□□□ -2.08
MCD1YDL003W THI3Q07471 609 aa2.08□□□□□ -2.08
MCD1YDL003W ENT4Q07872 247 aa2.08□□□□□ -2.08
MCD1YDL003W SLF1Q12034 447 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W DIN7Q12086 430 aa2.08□□□□□ -2.08
MCD1YDL003W LYS21Q12122 440 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W YDR018CQ12185 396 aa2.08□□□□□ -2.08
MCD1YDL003W PKH2Q12236 1081 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W LCB4Q12246 624 aa2.08□□□□□ -2.08
MCD1YDL003W YOR012WQ12351 137 aa2.08□□□□□ -2.08
MCD1YDL003W PFK27Q12471 397 aaPredicted RBP2.08□□□□□ -2.08
MCD1YDL003W EFG1Q3E705 233 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W ISN1Q99312 450 aa2.08□□□□□ -2.08
MCD1YDL003W SCEIP03882 235 aa2.08□□□□□ -2.08
MCD1YDL003W RHO2P06781 192 aa2.08□□□□□ -2.08
MCD1YDL003W DFR1P07807 211 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
MCD1YDL003W YFR010W-AP0C5N0 62 aa2.08□□□□□ -2.08
MCD1YDL003W RPL4AP10664 362 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W FUN14P18411 198 aa2.08□□□□□ -2.08
MCD1YDL003W YPK2P18961 677 aa2.08□□□□□ -2.08
MCD1YDL003W MAK32P23060 363 aa2.08□□□□□ -2.08
MCD1YDL003W GRR1P24814 1151 aa2.08□□□□□ -2.08
MCD1YDL003W MGR1P25573 417 aa2.08□□□□□ -2.08
MCD1YDL003W POF1P25576 258 aa2.08□□□□□ -2.08
MCD1YDL003W BUB2P26448 306 aaPredicted RBP2.08□□□□□ -2.08
MCD1YDL003W ACB1P31787 87 aa2.08□□□□□ -2.08
MCD1YDL003W ARO7P32178 256 aa2.08□□□□□ -2.08
MCD1YDL003W RIM1P32445 135 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W VPH1P32563 840 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W DSS4P32601 143 aa2.08□□□□□ -2.08
MCD1YDL003W SUR1P33300 382 aa2.08□□□□□ -2.08
MCD1YDL003W WBP1P33767 430 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W RPF2P36160 344 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W ECM8P38246 354 aa2.08□□□□□ -2.08
MCD1YDL003W IST2P38250 946 aa2.08□□□□□ -2.08
MCD1YDL003W MMS4P38257 691 aa2.08□□□□□ -2.08
MCD1YDL003W BMT2P38278 337 aa2.08□□□□□ -2.08
MCD1YDL003W PRS3P38689 320 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W IKI1P38874 309 aa2.08□□□□□ -2.08
MCD1YDL003W CKB2P38930 258 aa2.08□□□□□ -2.08
MCD1YDL003W PHO90P39535 881 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms